mRNA_H-elongata_contig13986.2776.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13986.2776.1
Unique NamemRNA_H-elongata_contig13986.2776.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13986.2776.1 vs. uniprot
Match: A0A6H5L5W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W5_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 9.300e-110
Identity = 256/661 (38.73%), Postives = 340/661 (51.44%), Query Frame = 1 
Query:  406 MRVKQGFKCRIYATPECRSKEISGAKVNDVLAMGTVVTLYTDWGDALEDHPLRRDGKGGKVLRVIEPQDGFVERRLLEDVQEVGNNTDAPVAAMVRPRK------FTGEEMMSIIRSAVTISPIIQATLRSGVYFEGVKDVHDYVDVHRAALRAAATLMRKDPTSREDVLACGGIGLFSFIVKKFCK-DLLVCEYGCWAFSVFAGEGGTVEHD--FRFQAAALKAEVMVAVATAVDAHRESALLRRQASIIVRQHCLGALAAMIEGNTSVAAELVSLNLHVTVAEDSICRWPSDAELSCLSCWVLLAAIRGHTRMSWSSTVERE-------YTGVQGEEDEL--GIYRVSSHENMLATGGVVYPGEDGAQA-------GNPDCGRAREIGGVDWGQDDRVVVDSVFRECPGADDKRAVGGMTTGGAFRTGLDETSDILLESLGDSYDHERKIMREETGSTERDKTSTILEFQARGQTEQPIPPPKHRNASIRRIQGRSFGAAFPKSGNQIVP------DLGCEKDAQGLHVGKDS---------------------------------TFFGGEQDVNVLERLLKLAEATK---------------VVNYDNEDTRKAASGLVQALAERLQDNQSSSEKLEWREARDRVDRLLREGESMGA 2151
            M+VKQGFKC++Y TP CR  E+      DVL MGT+VTL TDWG A+E HP R     GKVL ++EPQ+GF+ERR LED+Q  G + DA  A +  P         T EE M I+R A  +S ++++TLR G YFEG   VH +V+VHRAALRAAATLMRKDP SRE +L C GI LF  IV KFC+ D ++CEYGCWA +VFAGEG +      FRFQ A ++A  + AV  AVDAHR+SA LRR        + + ALAA++  N S A +L SLNLH TVAEDSI RWP+D ELSCL+CWVL + +   +R+     +E           G+ G+   +    +R+          G   P E+  ++       G  +   +  +G  D  +D     D               G   +G  F  G +ETSD+L+ SL D  D     + + T +T R  +S +      GQ     P      A+       +  AA    G + VP      D   EK    +H G+ +                                   F GE+D +VLERLLKLAEATK               V+N+DNEDTRKAAS LV A+  ++      S +   R ++ RV R+LREG+++GA
Sbjct:    1 MKVKQGFKCKVYKTPACRPDEVV-----DVLPMGTIVTLSTDWGGAMEKHPQRGKSGKGKVLWMVEPQEGFLERRPLEDLQPKGGD-DAVEAEVAAPSPHAAAVALTPEERMGIVRGATKMSELLRSTLRRGAYFEGAAGVHCFVEVHRAALRAAATLMRKDPASRERLLECRGIELFIQIVNKFCEEDRVLCEYGCWALAVFAGEGDSDSDPSVFRFQEAVVEAGGLAAVGYAVDAHRDSAQLRR--------YGVSALAAIVHENASTAGQLHSLNLHATVAEDSIRRWPNDPELSCLACWVLRSVVEPPSRLPRQGDLELGGKGDVVLLGGISGDGGSVVGSKFRMRRKSVEEVEVGSAMPAENSGESSLQKRNGGGSEGNSSLALGSGDDPRDQLGDADETGXXXXXXXXVFMEGSTMSGSVFGMGDNETSDLLI-SLADDDD-----VDDATTATGRKPSSPL------GQAGSVSPAASTITAAAPVSGVTASSAAKKHQGLEGVPVNEGRRDAPMEKLGGEVHAGQSTISSESPRGGASIGGGTKEAGEGRVAVQVGVVMAAAFKGEEDGDVLERLLKLAEATKGRVTTRRNEIRFARKVLNHDNEDTRKAASRLVGAILRQIDSTYVRSSRRRRRASQARVARVLREGQAIGA 635
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BLAST of mRNA_H-elongata_contig13986.2776.1 vs. uniprot
Match: D7G2D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D6_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 6.830e-100
Identity = 238/623 (38.20%), Postives = 312/623 (50.08%), Query Frame = 1 
Query:  478 AKVNDVLAMGTVVTLYTDWGDALEDHPLRRDGKGGKVLRVIEPQDGFVERRLLEDVQ-EVGNNTD-APVAAM---VRPRKFTGEEMMSIIRSAVTISPIIQATLRSGVYFEGVKDVHDYVDVHRAALRAAATLMRKDPTSREDVLACGGIGLFSFIVKKFCK-DLLVCEYGCWAFSVFAGEGGTVEHD----FRFQAAALKAEVMVAVATAVDAHRESALLRRQASIIVRQHCLGALAAMIEGNTSVAAELVSLNLHVTVAEDSICRWPSDAELSCLSCWVLLAAIRGHTRMSWSSTVERE-------YTGVQG-----------------EEDELG--IYRVSSHENMLATGGVVYPGEDGAQAGNPD-----CGRAREIGGVDWGQDDRVVVDSVFRECPGADDKRAVGGMTTGGAFRTGLDETSDILLESLGDSYDHERKIMREETGSTERDKTSTILEFQARGQTEQPIPPP-------KHRNASIRRIQGRSFGAAFPKSGNQIVPDLGCEKDAQGLHVGKDS-----------------TFFGGEQDVNVLERLLKLAEATKVVNYDNEDTRKAASGLVQALAERLQDNQSSSEKLEWREARDRVDRLLREGESMGA 2151
            ++V DVL MGT+VTL TDWG+ +E HP R     GKVL ++EPQ+GF+ERR LED+    G+  D A VAA      P   T EE M I+R A  +S ++++TLR G YFEG   VH +++VHRAALRAAATLMRKDP SRE +L C GI LF  IV KFC+ D L+CEYGCWA +VFAGEG          FRFQ A ++A  + AV  AVDAH +SA LRR          + ALAA++  N S A +L SLNL  TVAEDSI RWP+D ELSCL+CWVL + +   +R+      E         + G+ G                 EE E+G  +   S   ++    G    G++    G+ D      G A E GG   G         VF E          G   +G  F  G +ETSD+L+    D                      ++           P+          KHR      +    + A   + G      +  E    G  +G  +                   F GE+D  VLERLLKLAEATKV+N+DNEDTRKAAS LV+A+  ++      S +   R ++ RV R+LREG+++GA
Sbjct:    2 SQVVDVLPMGTIVTLSTDWGEVMEKHPQRGKNGKGKVLWMVEPQEGFLERRPLEDLPANRGDEADEAEVAAPPPHAAPVSLTPEERMGIVRGATKMSELLRSTLRRGAYFEGAAGVHSFLEVHRAALRAAATLMRKDPASREGLLECRGIELFVLIVSKFCEEDRLLCEYGCWALAVFAGEGXXXXXXXPSVFRFQEAVVEAGGLAAVGCAVDAHPDSAQLRRCG--------VSALAAIVHDNASTAGQLHSLNLQATVAEDSIRRWPNDPELSCLACWVLRSVVEPPSRLPRQGDPELRGKGDVVLHGGIGGDGGSVVGSKFRLRRKSVEEVEVGSAMPENSGESSLQKRNGGGLEGDNSLALGSGDDPRDQSGDANETGGCGGG---------VFME----------GSTMSGSVFGMGDNETSDLLISLADDDDIDXXXXXXXXXXXXXXXXXXSVSPAXXXXXXXXPVSAVTASSTSNKHRGLEGVPVNEGRWDAPMEQLGRAGQSTISSESLRAGEPIGSGTREAGEGRVAGQAGVVMAAAFEGEEDGEVLERLLKLAEATKVLNHDNEDTRKAASRLVEAILRQIDSTYVRSSRRRRRASQARVARVLREGQAIGA 597
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13986.2776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5W5_9PHAE9.300e-11038.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2D6_ECTSI6.830e-10038.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13986contigH-elongata_contig13986:2172..8167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-00_005760.1
Exons9
Model size2157
Cds size2157
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929831.5750127-CDS-H-elongata_contig13986:2171..23421622929831.5750127-CDS-H-elongata_contig13986:2171..2342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 2172..2342 -
1691679175.498801-CDS-H-elongata_contig13986:2171..23421691679175.498801-CDS-H-elongata_contig13986:2171..2342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 2172..2342 -
1622929831.5862975-CDS-H-elongata_contig13986:2822..36691622929831.5862975-CDS-H-elongata_contig13986:2822..3669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 2823..3669 -
1691679175.5067878-CDS-H-elongata_contig13986:2822..36691691679175.5067878-CDS-H-elongata_contig13986:2822..3669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 2823..3669 -
1622929831.5969322-CDS-H-elongata_contig13986:4002..42031622929831.5969322-CDS-H-elongata_contig13986:4002..4203Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 4003..4203 -
1691679175.5158498-CDS-H-elongata_contig13986:4002..42031691679175.5158498-CDS-H-elongata_contig13986:4002..4203Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 4003..4203 -
1622929831.6098535-CDS-H-elongata_contig13986:4384..44521622929831.6098535-CDS-H-elongata_contig13986:4384..4452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 4385..4452 -
1691679175.5254576-CDS-H-elongata_contig13986:4384..44521691679175.5254576-CDS-H-elongata_contig13986:4384..4452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 4385..4452 -
1622929831.6231577-CDS-H-elongata_contig13986:4884..51281622929831.6231577-CDS-H-elongata_contig13986:4884..5128Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 4885..5128 -
1691679175.5372825-CDS-H-elongata_contig13986:4884..51281691679175.5372825-CDS-H-elongata_contig13986:4884..5128Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 4885..5128 -
1622929831.6337862-CDS-H-elongata_contig13986:6023..61811622929831.6337862-CDS-H-elongata_contig13986:6023..6181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 6024..6181 -
1691679175.5530062-CDS-H-elongata_contig13986:6023..61811691679175.5530062-CDS-H-elongata_contig13986:6023..6181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 6024..6181 -
1622929831.6465073-CDS-H-elongata_contig13986:6767..68841622929831.6465073-CDS-H-elongata_contig13986:6767..6884Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 6768..6884 -
1691679175.5631444-CDS-H-elongata_contig13986:6767..68841691679175.5631444-CDS-H-elongata_contig13986:6767..6884Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 6768..6884 -
1622929831.6650157-CDS-H-elongata_contig13986:7178..73401622929831.6650157-CDS-H-elongata_contig13986:7178..7340Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 7179..7340 -
1691679175.5730908-CDS-H-elongata_contig13986:7178..73401691679175.5730908-CDS-H-elongata_contig13986:7178..7340Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 7179..7340 -
1622929831.6818354-CDS-H-elongata_contig13986:7978..81671622929831.6818354-CDS-H-elongata_contig13986:7978..8167Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 7979..8167 -
1691679175.5832171-CDS-H-elongata_contig13986:7978..81671691679175.5832171-CDS-H-elongata_contig13986:7978..8167Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13986 7979..8167 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13986.2776.1prot_H-elongata_contig13986.2776.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13986 2172..8167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13986.2776.1

>prot_H-elongata_contig13986.2776.1 ID=prot_H-elongata_contig13986.2776.1|Name=mRNA_H-elongata_contig13986.2776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=719bp
KVKIPVRVHFSHSQSGWTEFLNRVMRELELEDIDGIYEEMDGAPIARISS
LVDGGLYFARPTEVCAMLRSLVRTEPESNPAWPRVEEGLEAKRELERCCA
YFKESSNNIFQASDGRTCALVEAIPEKDKEAVFWKMRVKQGFKCRIYATP
ECRSKEISGAKVNDVLAMGTVVTLYTDWGDALEDHPLRRDGKGGKVLRVI
EPQDGFVERRLLEDVQEVGNNTDAPVAAMVRPRKFTGEEMMSIIRSAVTI
SPIIQATLRSGVYFEGVKDVHDYVDVHRAALRAAATLMRKDPTSREDVLA
CGGIGLFSFIVKKFCKDLLVCEYGCWAFSVFAGEGGTVEHDFRFQAAALK
AEVMVAVATAVDAHRESALLRRQASIIVRQHCLGALAAMIEGNTSVAAEL
VSLNLHVTVAEDSICRWPSDAELSCLSCWVLLAAIRGHTRMSWSSTVERE
YTGVQGEEDELGIYRVSSHENMLATGGVVYPGEDGAQAGNPDCGRAREIG
GVDWGQDDRVVVDSVFRECPGADDKRAVGGMTTGGAFRTGLDETSDILLE
SLGDSYDHERKIMREETGSTERDKTSTILEFQARGQTEQPIPPPKHRNAS
IRRIQGRSFGAAFPKSGNQIVPDLGCEKDAQGLHVGKDSTFFGGEQDVNV
LERLLKLAEATKVVNYDNEDTRKAASGLVQALAERLQDNQSSSEKLEWRE
ARDRVDRLLREGESMGAS*
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mRNA from alignment at H-elongata_contig13986:2172..8167-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13986.2776.1 ID=mRNA_H-elongata_contig13986.2776.1|Name=mRNA_H-elongata_contig13986.2776.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5996bp|location=Sequence derived from alignment at H-elongata_contig13986:2172..8167- (Himanthalia elongata Himel1 dioecious)
AAGGTCAAAATCCCAGTTCGGGTACATTTTTCACATTCCCAGTCCGGATG
GACGGAATTCCTCAACCGCGTCATGCGCGAACTAGAGCTGGAGGACATCG
ACGGTATTTACGAGGAAATGGACGGCGCACCGATCGCCCGCATCTCAAGC
CTAGTGGATGGGGGTCTTTACTTTGCCAGACCCACCGAGGTGTGAAGAAA
GGGGGTATTTATCGGTCTGAACTCATCAAATCTAGTATTATTTCGATCGG
AATGTAAAGGCCAGACGGATCGTTCCAACGTTGAGAGGACTCTCTCTCGA
CCAGACTCTTCGAGCACATTTGATAAGAATACATACTGCATCATGTCGTC
GTGCTACTAGGAAATATGTGGAAATTTCAATAGAACCGTTTCTTTAGCTG
CTGACAATGTCGAGCGAAGATATAGCTCTTCTCGAGGTACTTTAACCCCA
AGGGAACTCGATCTGTTTTTTACACACTAAATTCAATATAAAACTTGAAA
TCGAGTTCCAAAAGGGTTAAGCTGTAGTAGTACACGTGTGTGTGAATATT
GCCTGGTTCATTGCATCATATAATTTGGAGAAGGCCACGAGGACCACTCT
GCTGCGCTGGATAATAATGGATAAACAAAGCTGTGTGGACTAAGACGACA
CAAGAGCTCTGAGAATAATAATGTGATCGAAGTTCGAAAATATATGCTAC
GGGTTAAAACGAAAATAATATGTAGTAAGTAAGGTAATATCCCTTGGCGT
CATGAGACCATTTTGCTTGTTAATAGTGGGCAGTTGTATACACTACAGGT
TGCCCAAACTATGGCCGTCGACCACAGGTGTGTGCCATGTTACGGAGTCT
GGTAAGAACAGAGCCGGAGAGCAATCCTGCGTGGCCGAGGGTTGAAGAAG
GGCTGGAGGCCAAACGTGAACTGGAGCGTTGCTGCGCGTACTTCAAGGAA
TCTAGTAATAATATTTTCCAGGCGTCAGATGGAAGAACAGTTGAAGACAT
CGGCGAGGTTATCGAAGGATCGGCATTTCGCCGCGGAAAATGGCGAAATC
GCGCGGAATCCTTGTGTGAAAGCAAGCCCTGTCAAAAAGCAAAATTTCTG
TGGAACGGAAACTCTAGCCAAAGCGAGGGCGAGTAGCTGCTGCTGTGGAG
CGCTTGATTTTCACGCGTTTGACCCTGCGGACACCAGGCATATCTAATGC
TAATCGATGCCGAGGCTGTTAATTTGGTTTCACGTGTTGTCTCTATTTCT
TGCTCGCGCACGCCCGAAAACGCAAGGAAGGAGTGTGCATTGGTCGAGGC
AATCCCCGAAAAAGACAAGGAGGCGGTGTTTTGGAAAATGCGGGTCAAGC
AAGGCTTCAAGTGCAGGATTTATGCGACACCAGAGTGTCGGTCAAAAGAG
GTGATATGAACCGTGTGTGCGTGTGCGCATTATGTGTGTGTGTAAGAGAG
AGGAGCTACGTTCCAGCGTTGCAGAAGAGATTTATGATTATTGGAGACCC
ATAATAATGTATCCGCAGCTGACCTTGAGTCAAATGATGAGCAGTTCCAC
AGTGAACAGACAGTATGTTCATGAGACTGAGAACGGATTATGAGATAAGG
AATAACCCCCCCCCCATCTCTTACAGGTATTTTCTTATCCGTTTTAAATC
TCACGAACATAGAAAAAATATACTTCGTTAAATAATTTCCCCATTCCTCA
TCTCATAATATGTTCCTAGTCTCACGTGTGTGTAATGAACACGCTACGTA
TAGTATGGAATACCGTTAGTAGCGTTGTTGAGCGTTGTTTAGCGTTGTTT
TTATGTTGCTCATAGGTTTAAGAAAAAGCCGAAAATAAAGTGTCCGCATA
CTTCTGGTAATGTATTCTCCTCGAGATGACGAGTCGACCGAGGGGCGAAC
GCGTTGACTTGAAGTGCGACCCGACAAATCGACAGAGGGGCGAACGCGTT
GACTTGAAGTTTGCATGGTGCGTGTTTTACTCAAAGATTTCGGGCGCGAA
AGTGAACGATGTTCTCGCGATGGGCACAGTCGTCACCCTTTACACGGATT
GGGGAGACGCCTTAGAAGACCATCCCCTGAGGCGAGACGGGAAAGGGGGC
AAAGTGCTCCGGGTGATAGAGCCTCAAGACGGTTTCGTCGAGAGGTGAAA
GCGTTGCTCGACTCCTCTCACGATATGCCGCAATAATGTTTATTGGGCTA
TTTCCTCCAAAACAAGTGTGACATGCCATATAATGTCATGTTGTCATCAC
TTTTAATTGTCATCCCTTTTAGATTATAGACGTTAGGCTTGTGGACGCAT
CAGCCAGGGTCACACAGTGCAGGAGGAGAGGTACACATGATTTCTCTACA
TTCCTTCTGTGGTACTTGCCTTCATTTTTTTATCACGAGAAGGATTCAGC
GGTTCCTTTCCCTTGTCGACCGTGAAGTCGAATTTTGTGTCCCTACGAAA
TAATCGTTCTCCACTTATTGGGTATGATGTGACATTATATCCTAGTTCGT
GTGACTGCGCCGAGATTTGAATTCACGCCCCAAAGTCAGAAGGTTTCGAG
GATACCAACTGAACCACCGGCGTGACCGATATGTTTGTTTGTGTGTTGTA
TATATATATATATATATATATATATTAAATTGTACCTAACCGCACAATCC
GGCCCTCCTGTCATGGTAGTAATTTTAGGCTCATCATGTTATTGGTCCTC
CCAGTATTATGTAATATAATACCGGCGGTACTATTTATCAAATTGCACAT
AATAACCGCTAATAATGCAATCCGGCCCTATAATCTACTAGTACTCATTA
TATGCTATTGCGTGTGTGTGTGTGTGTGTGAGAGAGAGGAGGATCCCAAC
CGTTCAACCAACAAGGAATATGACAATGCTGGAAATTATAAACGCATTTG
GTTAGTTAGTTAGTTACTTACTTATGTGAGTTAGCTAGTGTTATAAAATG
TACCAGTAGCTAGTTGTAAACGTTAGTTAGCTGTTTACTGTAGTTAGTTA
GTCAATTAGTTCGCTTTTATCATTATGCTGTTCCTACAGGAGATTATTGG
AGGATGTGCAAGAAGTCGGCAACAACACCGATGCGCCGGTGGCGGCAATG
GTTAGACCGAGAAAGTTTACGGGAGAGGAAATGATGTCGATCATACGTTC
TGCGGTCACGATATCCCCGATAATACAAGCGACGTTGCGGAGCGGTGTGT
ACTTCGAGGGGGTCAAAGATGTCCATGACTACGTCGACGTCCATCGTGCC
GCCCTGAGGGCGGCGGCCACTCTGATGAGAAAGGTGGTAGCGCGGTGTAC
GAATCGTTCTGACTCGTTAGAGTATGGCTTCCGATTACGTAAAACGTGGT
TATTGCCCTCTTTGATCCTTAGATACCAGCAAAACGAACCGAAGCGTCAC
GTGGGTGTAACCCAGTTTCAACTTATTCCCCGACCGGTTCTTTTTTTTTA
ACGCGGTGGGTGAAGTGATGAGGCACTGCTGTAGCGGTAACCTAGTCACC
CGAAGGTCACTCCCGAATAGCGAAAGCAGTCATCAGCAGCAGTAACGAAA
AAGCTTGCGCTCGTTAAAACTTACTCAGAGCCTCCTGCTGACATATCATC
CCCCTGAACCCGGCCCTACATCTTATTGGCCGCGTATTTCTTTTTCGGTG
TCTCGGCTGGGTCTCCACCGTTGAAATTGTTACCCCACCATTGAAATCGT
CGCAACTTTAACAAGGACCCGACTTCAAGAGAAGATGTGCTGGCCTGCGG
AGGAATCGGTTTGTTTTCATTCATCGTGAAGAAGTGAGCGCGAATCCCTC
GTCGTTACGTATACCCAGCGGCGTAGCAGTGTTCCTCAAGATGGGGAAGG
GGGAAGGGAGGATCAGTCAACCAACGCCTCTCAAGCCTTCCCGCAGATTC
TGATTCACGACGGCATGTCTTCCGCCACTTTAGTATGTATCTCCCTTTGG
CTTACCTTTCCCAGATTCTGCAAGGATCTTTTGGTCTGCGAATACGGCTG
CTGGGCCTTTTCCGTGTTCGCTGGAGAGGGTGGCACAGTCGAGCATGATT
TTCGGTTCCAGGCGGCAGCGTTGAAGGCAGAGGTCATGGTGGCGGTTGCC
ACGGCGGTTGATGCTCACCGAGAGTCGGCGCTACTGAGGAGGCAAGCATC
GATTATCGTTCGTCAGTGGTTAGGAGGGGGCATGTTACGATTTTGCTTTT
TGATGTAGTATCTTCGTTTGAACTCAGCTGGCGGAAACGATAAGCACGAT
CATCGCTTTGACTGAATTGAAGAATGGTAGTTCGGAAAATGATTCTTCGA
GCTGGCAAACGTTTGCGAAAAAGTAGAAGGCGAGTTACTGGCATTGCGGA
AGACCTGCCTTGTGGGCATTCGTCTCGACATGGAACATAAACTCCCTGTT
TCCCTCTAGGGTCGAGTGATATGGAGGAGTCATAGAGCTGCTGAAATCGC
TAAAAGCGATACATTGCTTGTATGGCACGCGATGTTGTTGGTCAACAGGC
ATTGCCTCGGCGCGCTGGCGGCAATGATCGAGGGAAACACATCCGTCGCC
GCGGAACTCGTCTCCCTGAACCTTCACGTGACCGTCGCGGAGGACTCCAT
CTGCCGGTGGCCCAGCGACGCTGAGCTGAGCTGTCTGAGTTGCTGGGTTT
TGTTAGCTGCAATACGAGGACATACAAGGATGTCGTGGTCCAGCACAGTG
GAGCGAGAATATACTGGTGTTCAAGGAGAGGAAGACGAATTAGGCATTTA
CAGAGTGTCCAGTCACGAGAACATGTTGGCAACGGGAGGTGTGGTTTATC
CGGGGGAAGACGGTGCTCAAGCTGGGAATCCCGATTGTGGGAGAGCACGC
GAAATCGGTGGCGTCGACTGGGGACAAGATGACCGCGTGGTGGTGGACTC
CGTTTTTCGGGAGTGCCCTGGAGCGGACGACAAAAGAGCGGTTGGCGGCA
TGACGACAGGTGGGGCGTTTCGCACTGGACTGGACGAGACTAGCGATATA
TTGCTCGAGAGTCTCGGTGATTCATACGATCACGAAAGGAAAATCATGCG
TGAAGAGACGGGTAGCACTGAGAGGGACAAAACCTCGACAATACTTGAAT
TCCAGGCGAGGGGCCAGACTGAGCAACCGATCCCTCCTCCAAAGCACCGA
AACGCCTCAATTCGACGAATTCAGGGTAGATCTTTCGGGGCAGCCTTCCC
GAAGAGTGGCAATCAGATTGTCCCTGATCTTGGTTGTGAGAAAGATGCGC
AAGGACTACATGTGGGGAAAGATTCGACATTTTTCGGAGGAGAACAGGAT
GTAAACGTTCTGGAGAGATTGCTCAAGCTAGCCGAGGCGACCAAGGTGAC
ATTATCATGACGGCGGATTCCCCCCAACGCCATGACAGATATTAATAGTC
CAATAAAAAGAGGTACATAATATATACATAGTTATATACTGTATATAATA
TCGGTCCCCAGAAGACTCGAGTAAACATATTTGACGTTTTTACAACCAAA
ATATCGTCCACATACTTTGGCGACTCTTTGGGCCCATGACATCGAACAAT
ACGTTACTGAGTGCGTAGTCATATTTTTCGGGTGACGCCAAGGAGGCATA
ATTATTCGACAGCAACCCACATAATTAACTTCGTTTGTGGCAGGTTGTGT
AGGTTCTTCCGTTACTAAACCTCTCTGTCTCACCTCCCGGAGCTTTCCCG
ATTCACGAGATACCATATAACCTTTCGGGCTTTGGCTGGTGGGATCTATT
GCACAAAGTGCCAGGGAGCGTATTTTGATATGTCCCGCTCGAGACGCTAA
CACGTTATTCGTTCTGACGCGAAAGGTCGTGAACTACGACAACGAGGACA
CGCGCAAAGCGGCGTCAGGGCTGGTGCAAGCCCTCGCCGAGCGACTCCAG
GATAACCAAAGCTCGAGCGAGAAACTGGAGTGGAGGGAAGCCAGAGATCG
AGTTGATCGACTCCTCAGGGAGGGAGAGTCGATGGGGGCATCGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig13986:2172..8167-

>mRNA_H-elongata_contig13986.2776.1 ID=mRNA_H-elongata_contig13986.2776.1|Name=mRNA_H-elongata_contig13986.2776.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4314bp|location=Sequence derived from alignment at H-elongata_contig13986:2172..8167- (Himanthalia elongata Himel1 dioecious)
AAGGTCAAAATCCCAGTTCGGGTACATTTTTCACATTCCCAGTCCGGATG
GACGGAATTCCTCAACCGCGTCATGCGCGAACTAGAGCTGGAGGACATCG
ACGGTATTTACGAGGAAATGGACGGCGCACCGATCGCCCGCATCTCAAGC
CTAGTGGATGGGGGTCTTTACTTTGCCAGACCCACCGAGAAGGTCAAAAT
CCCAGTTCGGGTACATTTTTCACATTCCCAGTCCGGATGGACGGAATTCC
TCAACCGCGTCATGCGCGAACTAGAGCTGGAGGACATCGACGGTATTTAC
GAGGAAATGGACGGCGCACCGATCGCCCGCATCTCAAGCCTAGTGGATGG
GGGTCTTTACTTTGCCAGACCCACCGAGGTGTGTGCCATGTTACGGAGTC
TGGTAAGAACAGAGCCGGAGAGCAATCCTGCGTGGCCGAGGGTTGAAGAA
GGGCTGGAGGCCAAACGTGAACTGGAGCGTTGCTGCGCGTACTTCAAGGA
ATCTAGTAATAATATTTTCCAGGCGTCAGATGGAAGAACAGTGTGTGCCA
TGTTACGGAGTCTGGTAAGAACAGAGCCGGAGAGCAATCCTGCGTGGCCG
AGGGTTGAAGAAGGGCTGGAGGCCAAACGTGAACTGGAGCGTTGCTGCGC
GTACTTCAAGGAATCTAGTAATAATATTTTCCAGGCGTCAGATGGAAGAA
CATGTGCATTGGTCGAGGCAATCCCCGAAAAAGACAAGGAGGCGGTGTTT
TGGAAAATGCGGGTCAAGCAAGGCTTCAAGTGCAGGATTTATGCGACACC
AGAGTGTCGGTCAAAAGAGTGTGCATTGGTCGAGGCAATCCCCGAAAAAG
ACAAGGAGGCGGTGTTTTGGAAAATGCGGGTCAAGCAAGGCTTCAAGTGC
AGGATTTATGCGACACCAGAGTGTCGGTCAAAAGAGATTTCGGGCGCGAA
AGTGAACGATGTTCTCGCGATGGGCACAGTCGTCACCCTTTACACGGATT
GGGGAGACGCCTTAGAAGACCATCCCCTGAGGCGAGACGGGAAAGGGGGC
AAAGTGCTCCGGGTGATAGAGCCTCAAGACGGTTTCGTCGAGAGATTTCG
GGCGCGAAAGTGAACGATGTTCTCGCGATGGGCACAGTCGTCACCCTTTA
CACGGATTGGGGAGACGCCTTAGAAGACCATCCCCTGAGGCGAGACGGGA
AAGGGGGCAAAGTGCTCCGGGTGATAGAGCCTCAAGACGGTTTCGTCGAG
AGGAGATTATTGGAGGATGTGCAAGAAGTCGGCAACAACACCGATGCGCC
GGTGGCGGCAATGGTTAGACCGAGAAAGTTTACGGGAGAGGAAATGATGT
CGATCATACGTTCTGCGGTCACGATATCCCCGATAATACAAGCGACGTTG
CGGAGCGGTGTGTACTTCGAGGGGGTCAAAGATGTCCATGACTACGTCGA
CGTCCATCGTGCCGCCCTGAGGGCGGCGGCCACTCTGATGAGAAAGGAGA
TTATTGGAGGATGTGCAAGAAGTCGGCAACAACACCGATGCGCCGGTGGC
GGCAATGGTTAGACCGAGAAAGTTTACGGGAGAGGAAATGATGTCGATCA
TACGTTCTGCGGTCACGATATCCCCGATAATACAAGCGACGTTGCGGAGC
GGTGTGTACTTCGAGGGGGTCAAAGATGTCCATGACTACGTCGACGTCCA
TCGTGCCGCCCTGAGGGCGGCGGCCACTCTGATGAGAAAGGACCCGACTT
CAAGAGAAGATGTGCTGGCCTGCGGAGGAATCGGTTTGTTTTCATTCATC
GTGAAGAAGACCCGACTTCAAGAGAAGATGTGCTGGCCTGCGGAGGAATC
GGTTTGTTTTCATTCATCGTGAAGAAATTCTGCAAGGATCTTTTGGTCTG
CGAATACGGCTGCTGGGCCTTTTCCGTGTTCGCTGGAGAGGGTGGCACAG
TCGAGCATGATTTTCGGTTCCAGGCGGCAGCGTTGAAGGCAGAGGTCATG
GTGGCGGTTGCCACGGCGGTTGATGCTCACCGAGAGTCGGCGCTACTGAG
GAGGCAAGCATCGATTATCGTTCGTCAATTCTGCAAGGATCTTTTGGTCT
GCGAATACGGCTGCTGGGCCTTTTCCGTGTTCGCTGGAGAGGGTGGCACA
GTCGAGCATGATTTTCGGTTCCAGGCGGCAGCGTTGAAGGCAGAGGTCAT
GGTGGCGGTTGCCACGGCGGTTGATGCTCACCGAGAGTCGGCGCTACTGA
GGAGGCAAGCATCGATTATCGTTCGTCAGCATTGCCTCGGCGCGCTGGCG
GCAATGATCGAGGGAAACACATCCGTCGCCGCGGAACTCGTCTCCCTGAA
CCTTCACGTGACCGTCGCGGAGGACTCCATCTGCCGGTGGCCCAGCGACG
CTGAGCTGAGCTGTCTGAGTTGCTGGGTTTTGTTAGCTGCAATACGAGGA
CATACAAGGATGTCGTGGTCCAGCACAGTGGAGCGAGAATATACTGGTGT
TCAAGGAGAGGAAGACGAATTAGGCATTTACAGAGTGTCCAGTCACGAGA
ACATGTTGGCAACGGGAGGTGTGGTTTATCCGGGGGAAGACGGTGCTCAA
GCTGGGAATCCCGATTGTGGGAGAGCACGCGAAATCGGTGGCGTCGACTG
GGGACAAGATGACCGCGTGGTGGTGGACTCCGTTTTTCGGGAGTGCCCTG
GAGCGGACGACAAAAGAGCGGTTGGCGGCATGACGACAGGTGGGGCGTTT
CGCACTGGACTGGACGAGACTAGCGATATATTGCTCGAGAGTCTCGGTGA
TTCATACGATCACGAAAGGAAAATCATGCGTGAAGAGACGGGTAGCACTG
AGAGGGACAAAACCTCGACAATACTTGAATTCCAGGCGAGGGGCCAGACT
GAGCAACCGATCCCTCCTCCAAAGCACCGAAACGCCTCAATTCGACGAAT
TCAGGGTAGATCTTTCGGGGCAGCCTTCCCGAAGAGTGGCAATCAGATTG
TCCCTGATCTTGGTTGTGAGAAAGATGCGCAAGGACTACATGTGGGGAAA
GATTCGACATTTTTCGGAGGAGAACAGGATGTAAACGTTCTGGAGAGATT
GCTCAAGCTAGCCGAGGCGACCAAGGCATTGCCTCGGCGCGCTGGCGGCA
ATGATCGAGGGAAACACATCCGTCGCCGCGGAACTCGTCTCCCTGAACCT
TCACGTGACCGTCGCGGAGGACTCCATCTGCCGGTGGCCCAGCGACGCTG
AGCTGAGCTGTCTGAGTTGCTGGGTTTTGTTAGCTGCAATACGAGGACAT
ACAAGGATGTCGTGGTCCAGCACAGTGGAGCGAGAATATACTGGTGTTCA
AGGAGAGGAAGACGAATTAGGCATTTACAGAGTGTCCAGTCACGAGAACA
TGTTGGCAACGGGAGGTGTGGTTTATCCGGGGGAAGACGGTGCTCAAGCT
GGGAATCCCGATTGTGGGAGAGCACGCGAAATCGGTGGCGTCGACTGGGG
ACAAGATGACCGCGTGGTGGTGGACTCCGTTTTTCGGGAGTGCCCTGGAG
CGGACGACAAAAGAGCGGTTGGCGGCATGACGACAGGTGGGGCGTTTCGC
ACTGGACTGGACGAGACTAGCGATATATTGCTCGAGAGTCTCGGTGATTC
ATACGATCACGAAAGGAAAATCATGCGTGAAGAGACGGGTAGCACTGAGA
GGGACAAAACCTCGACAATACTTGAATTCCAGGCGAGGGGCCAGACTGAG
CAACCGATCCCTCCTCCAAAGCACCGAAACGCCTCAATTCGACGAATTCA
GGGTAGATCTTTCGGGGCAGCCTTCCCGAAGAGTGGCAATCAGATTGTCC
CTGATCTTGGTTGTGAGAAAGATGCGCAAGGACTACATGTGGGGAAAGAT
TCGACATTTTTCGGAGGAGAACAGGATGTAAACGTTCTGGAGAGATTGCT
CAAGCTAGCCGAGGCGACCAAGGTCGTGAACTACGACAACGAGGACACGC
GCAAAGCGGCGTCAGGGCTGGTGCAAGCCCTCGCCGAGCGACTCCAGGAT
AACCAAAGCTCGAGCGAGAAACTGGAGTGGAGGGAAGCCAGAGATCGAGT
TGATCGACTCCTCAGGGAGGGAGAGTCGATGGGGGCATCGTAGGTCGTGA
ACTACGACAACGAGGACACGCGCAAAGCGGCGTCAGGGCTGGTGCAAGCC
CTCGCCGAGCGACTCCAGGATAACCAAAGCTCGAGCGAGAAACTGGAGTG
GAGGGAAGCCAGAGATCGAGTTGATCGACTCCTCAGGGAGGGAGAGTCGA
TGGGGGCATCGTAG
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