prot_H-elongata_contig139582.2753.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139582.2753.1
Unique Nameprot_H-elongata_contig139582.2753.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
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BLAST of mRNA_H-elongata_contig139582.2753.1 vs. uniprot
Match: D8LQZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ7_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.010e-25
Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 0 
Query:   84 LSPWEIELAKAGGTWKGPDAIRDEKERCRQWCQMAKASLEPSKEXXXXXXXXXXXGRHGEDGHVSERDRRQRLRKLIEAAELNTSFFLVPGLSDKQVM 181
            LSPWE+ELAKA GTW+G   + DEKERCRQWC +AKASL+  ++            R GE        R QRLR+L++AAELN+SFFLVPGL+DKQV+
Sbjct:   88 LSPWEMELAKAAGTWEGTGGVGDEKERCRQWCMIAKASLQAEEKEREKD------NRRGEGKLTGGTARHQRLRQLVDAAELNSSFFLVPGLNDKQVL 179
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BLAST of mRNA_H-elongata_contig139582.2753.1 vs. uniprot
Match: A0A6H5L231_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L231_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 5.540e-12
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:   84 LSPWEIELAKAGGTWKGPDAIRDEKERCRQWCQMAKASLE 123
            LSPWE+ELAKA GTW+GP  + DEKERCRQWC +AKASL+
Sbjct:  556 LSPWEMELAKAAGTWEGPGGVGDEKERCRQWCMIAKASLQ 595
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139582.2753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQZ7_ECTSI1.010e-2556.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L231_9PHAE5.540e-1275.00Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139582contigH-elongata_contig139582:437..1559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139582.2753.1mRNA_H-elongata_contig139582.2753.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139582 437..1559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139582.2753.1 ID=prot_H-elongata_contig139582.2753.1|Name=mRNA_H-elongata_contig139582.2753.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
PPPPPPLPSAAAGNGGMTSWNGGDTESQSGVMMEVDEAQHSPLPPPPPPL
PPLPPVSPPPPPPRRSAVTPPPPPPPPLPPPPPLSPWEIELAKAGGTWKG
PDAIRDEKERCRQWCQMAKASLEPSKEKEKERERDGGGGRHGEDGHVSER
DRRQRLRKLIEAAELNTSFFLVPGLSDKQVM
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