prot_H-elongata_contig139552.2751.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig139552.2751.1
Unique Nameprot_H-elongata_contig139552.2751.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig139552.2751.1 vs. uniprot
Match: D8LDU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU5_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.950e-36
Identity = 56/93 (60.22%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    1 IYSHP---LRARIELSLPDGQECSKSALSEAAQEQLDMYDKDLYLEPDCINVTVPLPVHCNYMGLGQECRGCYMTCEGVMKYMEDFPDEIQTW 90
            I+SHP   + A +  +    +EC  S+LS+AAQEQL MYDKDLYLEPDC+N   P+PVHCNYMGLGQECRGC+MTC+G  +Y++DF +EI  W
Sbjct:    3 IFSHPAAIIFAVLSFARVKAEECIVSSLSDAAQEQLSMYDKDLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMTCDGATRYLDDFAEEISVW 95          
BLAST of mRNA_H-elongata_contig139552.2751.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 9.410e-21
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0
Query:   20 CSKSALSEAAQEQLDMYDKDLYLEPDCINVTVPLPVHCNYMGLGQECRGCYMTCEGVMKYMEDFPDEI 87
            CS  +L++A Q+QL +YD D+YLE DC+N + PLP+ CNYMGLGQECRGC++TC G + Y++D  + I
Sbjct:  584 CSMDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHI 651          
BLAST of mRNA_H-elongata_contig139552.2751.1 vs. uniprot
Match: A0A6H5KP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP24_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.610e-16
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:   35 MYDKDLYLEPDCINVTVPLPVHCNYMGLGQECRGCYMTCE 74
            MYDK LYLEPDC+N   P+PVHCNYMGLGQECRGC+M  E
Sbjct:    1 MYDKGLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMDKE 40          
BLAST of mRNA_H-elongata_contig139552.2751.1 vs. uniprot
Match: A0A6H5KWI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI6_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 9.290e-16
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 0
Query:   18 QECSKSALSEAAQEQLDMYDKDLYLEPDCINVTVPLPVHCNYMGLGQECRGCYMTCEGV 76
            Q CS+ +L++  Q+QL++Y+ D+YLE DC+N + PLP+ CNYMGLGQECRGC++    V
Sbjct:  487 QSCSRDSLNDVDQQQLNLYENDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLALAHV 545          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig139552.2751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LDU5_ECTSI2.950e-3660.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDU6_ECTSI9.410e-2155.88N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KP24_9PHAE1.610e-1677.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWI6_9PHAE9.290e-1654.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig139552contigH-elongata_contig139552:380..667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig139552.2751.1mRNA_H-elongata_contig139552.2751.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig139552 380..667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig139552.2751.1 ID=prot_H-elongata_contig139552.2751.1|Name=mRNA_H-elongata_contig139552.2751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
IYSHPLRARIELSLPDGQECSKSALSEAAQEQLDMYDKDLYLEPDCINVT
VPLPVHCNYMGLGQECRGCYMTCEGVMKYMEDFPDEIQTWVSLDC*
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