prot_H-elongata_contig13939.2743.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13939.2743.1
Unique Nameprot_H-elongata_contig13939.2743.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length192
Homology
BLAST of mRNA_H-elongata_contig13939.2743.1 vs. uniprot
Match: D7G4P7_ECTSI (DUF4168 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4P7_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.520e-70
Identity = 127/202 (62.87%), Postives = 148/202 (73.27%), Query Frame = 0
Query:    1 AGNIIRSNGLTTHRYNELSHILSKRKDLRDKVQHQAYLYRVNADVRGDRKQPLVD-----------LPDTPPSLRERRRPLELLYSLVHDKVAETKQLPGVSNKKMLFAKSLKEIEALRRRQRRRLMKELGCDELPPGLCQPSMGGIGIAPRVTKACQRFPVVAEHIVRANGLNPEEFNRLSARSRANPLYRWQVLRCLHKL 191
            AGNIIRSNGLTT+RYN+LSHIL KRKDLR +VQHQAYLYRVNAD+RG + +PL D            P +P S  ERRR +         +  +T +     +KKMLFAKSL+EIEALR RQRRRLMKE+G ++LP GLC+P MG I  +PR+ K CQ FPV AE IV+ANGL PEEFNRLSARSRAN LYRWQVLRC+ KL
Sbjct:    2 AGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPLPDPVVVGAEGDAAAPTSPRSKAERRRIVN------RGQQVKTPRAGPPPDKKMLFAKSLREIEALRSRQRRRLMKEVGSNDLPSGLCRPEMGRIA-SPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKL 196          
BLAST of mRNA_H-elongata_contig13939.2743.1 vs. uniprot
Match: A0A835YJ45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ45_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.500e-35
Identity = 85/191 (44.50%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    1 AGNIIRSNGLTTHRYNELSHILSKRKDLRDKVQHQAYLYRVNADVRGDRKQPLVDLPDTPPSLRERRRPLELLYSLVHDKVAETKQLPGVSNKKMLFAKSLKEIEALRRRQRRRLMKELGCDELPPGLCQPSMGGIGIAPRVTKACQRFPVVAEHIVRANGLNPEEFNRLSARSRANPLYRWQVLRCLHKL 191
            AG II S  L+  R+N+L+ ++++ K L  +V  QAYLYRV A++ GD+  P+ DL +     R  R   E               L G   K  LFAKSL+E+E+LR  QRRRLM+ L  DELP GLC   M  +  +P V +AC++FP+ A  +VRANGL  EEFNRL  R++ N +YR++VLR +HKL
Sbjct:  119 AGRIITSCDLSISRFNQLTKLVAQDKQLASRVNRQAYLYRVGAELHGDKFLPVEDLREAAKGGRSGRGNGEFSDGA---NGLSAMALLGQPKKLRLFAKSLREVESLRMEQRRRLMETLEVDELPQGLCMTRMARVS-SPIVRRACEQFPLQAAAVVRANGLRTEEFNRLLQRAQKNLVYRYRVLRLVHKL 305          
BLAST of mRNA_H-elongata_contig13939.2743.1 vs. uniprot
Match: A0A4D9D076_9STRA (DUF4168 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D076_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.360e-13
Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   96 LFAKSLKEIEALRRRQRRRLMKELGCDELPPGLCQPSMGGIGIAPRVTKACQRFPVVAEHIVRANGLNPEEFNRLSARSRANPLYRWQVLRCL 188
            LFAKSL+EIEALR  Q   L +E   D LPPG   PS+  I +  +V   C RFPV AE I + NG    EFN L  ++  NP +RW+V R +
Sbjct:  281 LFAKSLREIEALRAEQNHLLKQEFHVDTLPPGATDPSLFPI-LNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKAEKNPFFRWRVERLM 372          
BLAST of mRNA_H-elongata_contig13939.2743.1 vs. uniprot
Match: W7TRM5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRM5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.100e-12
Identity = 43/92 (46.74%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   96 LFAKSLKEIEALRRRQRRRLMKELGCDELPPGLCQPSMGGIGIAPRVTKACQRFPVVAEHIVRANGLNPEEFNRLSARSRANPLYRWQVLRC 187
            LFAKSL+EIEALR  Q   L +E   D LPPG   PS+  I +  +V   C RFPV AE I + NG    EFN L  ++  NP +RW+   C
Sbjct:  210 LFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPI-LNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQAC 300          
BLAST of mRNA_H-elongata_contig13939.2743.1 vs. uniprot
Match: A0A7S3JPY0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPY0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.300e-9
Identity = 53/194 (27.32%), Postives = 98/194 (50.52%), Query Frame = 0
Query:    9 GLTTHRYNELSHILSKRKDLRDKVQHQAYLYRVNADVRGDRKQPLVDLPDTPPSLRERRRPLELLYSLVHDKV--AETKQLP--------GVSNKKMLFAKSLKEIEALRRRQRRRLMKELGCDELPP-GLCQPSMGGIGIAPRVTKACQRFPVVAEHIVRANGLNPEEFNRLSARSRANPLYRWQVLRCLHKL 191
            GL+   +N +S  ++   DL+ KV HQAYLYR+ + +   ++ P++    T     +      +  S   D +  A  KQ P          ++   LFA   K+++ L+++QR +L+  L  DE P   +C   +    ++  V   C+ FP  AE +VR+ G++   F +L A+  ++P++RW++ R + +L
Sbjct:  138 GLSVSEFNTISRTVAGSPDLKQKVLHQAYLYRLASKI-DTKRDPIIAPSQTIGGSSDSTSSSTITRSPPDDTLLKAYNKQNPRGSTALDGATADSIKLFASLAKQVQHLQQQQRAQLVSTLKIDEFPDLPICDDRVLPF-MSQEVRDLCRAFPAKAEALVRSYGVDYSSFEKLLAKVDSDPIFRWRLKRQMRQL 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13939.2743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4P7_ECTSI1.520e-7062.87DUF4168 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YJ45_9STRA5.500e-3544.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D076_9STRA2.360e-1347.31DUF4168 domain-containing protein n=1 Tax=Nannochl... [more]
W7TRM5_9STRA1.100e-1246.74Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S3JPY0_9STRA2.300e-927.32Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025433Domain of unknown function DUF4168PFAMPF13767DUF4168coord: 97..184
e-value: 5.4E-9
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13939contigH-elongata_contig13939:2584..5992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13939.2743.1mRNA_H-elongata_contig13939.2743.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13939 2584..5992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13939.2743.1 ID=prot_H-elongata_contig13939.2743.1|Name=mRNA_H-elongata_contig13939.2743.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
AGNIIRSNGLTTHRYNELSHILSKRKDLRDKVQHQAYLYRVNADVRGDRK
QPLVDLPDTPPSLRERRRPLELLYSLVHDKVAETKQLPGVSNKKMLFAKS
LKEIEALRRRQRRRLMKELGCDELPPGLCQPSMGGIGIAPRVTKACQRFP
VVAEHIVRANGLNPEEFNRLSARSRANPLYRWQVLRCLHKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025433DUF4168