mRNA_H-elongata_contig13926.2739.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: D8LBQ4_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ4_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.510e-42 Identity = 85/140 (60.71%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 25 KKIIFNGE-KHMRPVLGDVVRIHYTCALQ--------------------SGIGVRGIDGG-ESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDFWPR 378
K+IIF GE K RP +GDVVRIHYTCALQ SG G G DGG ++ ++ESSR RRRPLEFVVG+GQVVKGID +R ML+GERA++ V+ YGYGDKG PP IPP A+LVFDVNLLDFWPR
Sbjct: 381 KEIIFEGEEKRGRPDIGDVVRIHYTCALQESGGSGSGRSSRRSGGSHAVSGYGSSGNDGGGDAGVVESSRKHRRRPLEFVVGAGQVVKGIDRSIRQMLHGERARVFVTALYGYGDKGHPPTIPPRAALVFDVNLLDFWPR 520
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: A0A836CB63_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB63_9STRA) HSP 1 Score: 124 bits (311), Expect = 5.260e-31 Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 25 KKIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDFWPR 378
K+++F G+ RP GDVV HYTC L+ DGG ++ES+R RR EFV+G+G V++G+D GV M +GERA+I+VS Y YG++G PPIIPPGA+LVFDVNL+ FWPR
Sbjct: 321 KEVMFAGDADDRPEDGDVV--HYTCTLR--------DGGA--VVESTRKTRRCAFEFVLGAGAVIRGLDRGVARMAFGERARITVSAEYAYGERGFPPIIPPGAALVFDVNLIRFWPR 426
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: A0A7S3US58_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US58_HETAK) HSP 1 Score: 102 bits (254), Expect = 4.040e-24 Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 13 LSQIKKIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDFWPR 378
L+ K++I +G+ P +GDVVR+ + +L +DG + I+S++ R+RP EFV+G GQV+KG + V M GER+K ++S Y YG++G P IPPG+ LVFD LL FW R
Sbjct: 117 LNIFKEMIHHGDNENFPYIGDVVRLDFEVSL--------LDGTK---IDSTKHKRKRPFEFVIGEGQVIKGFERAVAGMSLGERSKFTISAEYAYGEEGMIPNIPPGSKLVFDATLLAFWAR 227
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: UPI001BB1C7EA (peptidyl-prolyl cis-trans isomerase Fkbp12-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1C7EA) HSP 1 Score: 93.6 bits (231), Expect = 2.410e-22 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 58 RPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDFW 372
+P G V++HYT L +G +SSR DR +P EF +G GQV+KG D GV M GERA ++ SP Y YG KG PP+IPP ++LVFDV LL+F+
Sbjct: 15 KPQSGQTVQVHYTGTLTNGN-----------KFDSSR-DRGKPFEFKLGQGQVIKGWDEGVAQMSKGERATLTCSPDYAYGAKGYPPVIPPNSTLVFDVELLNFF 107
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: D8M9W0_BLAHO (Peptidylprolyl isomerase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9W0_BLAHO) HSP 1 Score: 99.8 bits (247), Expect = 5.690e-22 Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 1
Query: 25 KKIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLL 363
K++I G+ P GD++ +HYT L SG + +SSR+ R RP +FV+G GQV+KG D GV TM GERAK++++P YGYG +G P +IPP A+LVFDV LL
Sbjct: 412 KEVIKAGDGKNFPKTGDMLTMHYTGTLTSGK-----------VFDSSRT-RGRPFQFVIGIGQVIKGWDEGVMTMSLGERAKLTLTPDYGYGARGVPGVIPPNATLVFDVELL 512
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: A0A0R3TWC6_RODNA (Peptidylprolyl isomerase n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TWC6_RODNA) HSP 1 Score: 92.4 bits (228), Expect = 7.060e-22 Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 28 KIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDF 369
++I G + P G V++HYT L G +SSR DR +P EF +G GQV++G D GV M GER+K+++SP YGYG G +IPP A+L+FDV L+ F
Sbjct: 6 EVIKEGNQSDYPKKGQTVKVHYTGTLTDGT-----------KFDSSR-DRGKPFEFKIGCGQVIRGWDEGVAKMSLGERSKLTISPDYGYGSSGAGGVIPPNATLIFDVELISF 107
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: A0A7S1SIP0_9CHLO (Peptidylprolyl isomerase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SIP0_9CHLO) HSP 1 Score: 91.7 bits (226), Expect = 2.080e-21 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 28 KIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLL 363
+++ G +P G+VV HYT L+ G + +SS S R +PL F++G G V+KG D G+ M G +AK++ SP YGYGD+G PP IPPGA L+FDV LL
Sbjct: 6 EVVEAGGGTRKPKHGEVVHCHYTGRLEDGT-----------VFDSSVS-RGKPLTFLIGIGAVIKGWDEGIAQMSLGSKAKLTCSPDYGYGDEGAPPAIPPGAVLIFDVELL 105
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: J3LCZ0_ORYBR (Peptidylprolyl isomerase n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LCZ0_ORYBR) HSP 1 Score: 97.8 bits (242), Expect = 3.310e-21 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 25 KKIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDF 369
KK++ GE ++RP GD V++HYT L G +SSR DR P +F +G GQV+KG DLG++TM GE A ++ P YG+ G PP+IPP A+L FDV L+ +
Sbjct: 86 KKLVREGEGYVRPDSGDEVQVHYTGTLMDGT-----------KFDSSR-DRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFDVELISW 188
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: A0A2P6TH41_CHLSO (Peptidylprolyl isomerase n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TH41_CHLSO) HSP 1 Score: 97.4 bits (241), Expect = 4.400e-21 Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 22 IKKIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDF 369
+K+I+ G P GD VR+HYT L+ G +SSR DR P EF +G GQV+KG DLGV TM GE +K+++ YGYG G PP IP GA+L+F+V LLD+
Sbjct: 50 VKEIVKPGTGWEEPESGDKVRVHYTGTLEDGT-----------KFDSSR-DRNEPFEFPLGLGQVIKGWDLGVATMKKGEISKLTIKSDYGYGASGSPPTIPGGATLIFEVELLDW 153
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Match: A0A5A8E9C9_CAFRO (Peptidylprolyl isomerase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E9C9_CAFRO) HSP 1 Score: 91.3 bits (225), Expect = 4.770e-21 Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 43 GEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESILIESSRSDRRRPLEFVVGSGQVVKGIDLGVRTMLYGERAKISVSPSYGYGDKGCPPIIPPGASLVFDVNLLDF 369
G+ P G VR+HY ++ GE++ I+SSR DR+ PLEF VG GQV+ G+D+ ++ M G+RAK+++ + YG +G PPIIPPGA+LV DV L+ F
Sbjct: 42 GDATSYPKDGMTVRVHYETMIE----------GENLKIDSSR-DRKVPLEFRVGLGQVIPGLDVAMKRMSRGQRAKLTIPAAMAYGARGYPPIIPPGAALVMDVELISF 139 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13926.2739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13926.2739.1 >prot_H-elongata_contig13926.2739.1 ID=prot_H-elongata_contig13926.2739.1|Name=mRNA_H-elongata_contig13926.2739.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp EWIPLSQIKKIIFNGEKHMRPVLGDVVRIHYTCALQSGIGVRGIDGGESIback to top mRNA from alignment at H-elongata_contig13926:4955..5332- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13926.2739.1 ID=mRNA_H-elongata_contig13926.2739.1|Name=mRNA_H-elongata_contig13926.2739.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=378bp|location=Sequence derived from alignment at H-elongata_contig13926:4955..5332- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13926:4955..5332- >mRNA_H-elongata_contig13926.2739.1 ID=mRNA_H-elongata_contig13926.2739.1|Name=mRNA_H-elongata_contig13926.2739.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at H-elongata_contig13926:4955..5332- (Himanthalia elongata Himel1 dioecious)back to top |