prot_H-elongata_contig13925.2735.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13925.2735.1
Unique Nameprot_H-elongata_contig13925.2735.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length313
Homology
BLAST of mRNA_H-elongata_contig13925.2735.1 vs. uniprot
Match: D8LQ40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ40_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 6.140e-87
Identity = 155/315 (49.21%), Postives = 202/315 (64.13%), Query Frame = 0
Query:    8 YEIDYNDMNMGPDILRLLGASEEVIAAKEREISSIK--WEAPKVAGLEHSSAIANFDDVALSGGKKGQTSGTTERIFKTIGSYDGPSGVGHAPPTNTAVLKVKISQAPEAVPKGKESKLPPAPEIGSEDDSSASDTSWDEESVIDGHAWWEDMSDEVDGLNSRISYNLRTAFGLADS-----VQDPAKTDNN--WRPPSSSGLSNSKPLVTLQPVGVGTYKGMEVKYMRGGEGDGDSRGSTNEGNSQEESGDEGWDHTDIPDEDYILEWSTNISPNLSSALENAKSPAQLAEKLSREISWRPPTTYGLGNSAPII 313
            YE+DY  MN+ P+ILR+LGASEEVIAAKE E+S +   W  P   GLEHSSAIA+   VA+ GG      G  ER+FK +GS+D  +    A      VLKVK++ APE VPK +ESKLPP  E    DD  + D SWDE S IDGHAWWE  SD+ +   + +S+NLR A GLA +      +  +  D N  WRPPS +GL NSKPL TL P+ +G  KG+E++Y +   G+G++ G       +E S +EGWD+ D+PDE+Y+L+WST+ISPNL+ A+    S    A  LS E+SW+PP + GL NSAPII
Sbjct:   48 YEVDYASMNVSPEILRMLGASEEVIAAKEAEVSGVTSTWVPPTETGLEHSSAIADSAAVAI-GGSGAPGGGGVERVFKAVGSFDKDAEDAAAAGERAPVLKVKVAHAPEPVPKKRESKLPPKSEDSWSDDDGSED-SWDEASAIDGHAWWESGSDDEELETAAMSHNLRVALGLATAGEVATAETGSGGDGNGDWRPPSFAGLDNSKPLTTLMPLVIGQQKGLEIEYKKK-MGEGEAEGGEGGDGDEEWSEEEGWDYEDVPDEEYLLDWSTSISPNLAKAMGRRASTEHKALALSEELSWKPPMSSGLKNSAPII 359          
BLAST of mRNA_H-elongata_contig13925.2735.1 vs. uniprot
Match: D8LQ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ41_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 2.390e-25
Identity = 86/238 (36.13%), Postives = 117/238 (49.16%), Query Frame = 0
Query:    3 EDDEEYEIDYNDMNMGPDILRLLGASEEVIAAKEREISSI--KWEAPKVAGLEHSSAI-ANFDDVALSGGKKGQTSGTTERIFKTIGSYDGPSGVGHAPPTNTAVLKVKISQAPEAVPKGKESKLPPAPEIGSEDDSSASDTSWDEESVIDGHAWWEDMS-DEVDGLNSRISYNLRTAFGLA-DSVQDPAKTD-----NNWRPPSSSGLSNSKPLVTLQPVGVGTYKGMEVKYMRGGE 230
            E+ ++YE+DY  +N  P++LR+LGASE VIAAKE E+S+I   W  P   GLE+S+ I A+   V L  GK    SG   R+ K +G +D  +    A        KV                             S+ D SWDE S  + HAWWE  S DE   + S +S NL+   GL   S  D A  +     N W PPS +GLSNS+ +  L+P+ VG  K  +V+Y   G+
Sbjct:   22 EEGDDYELDYASLNANPELLRMLGASERVIAAKEAEVSAIVSTWAPPPEPGLENSTTIIADSAAVVLGSGKAPCGSGVA-RVSKLVGGFDQDAAAAAATAQEAPGWKV-----------------------------SSKDESWDEASA-NRHAWWESGSEDEEYEMMSAMSPNLQAVLGLRRPSGTDTANAEQGDNKNEWHPPSFAGLSNSRRVTVLRPLVVGHGKMFDVEYRNRGQ 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13925.2735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ40_ECTSI6.140e-8749.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LQ41_ECTSI2.390e-2536.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13925contigH-elongata_contig13925:3117..4440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13925.2735.1mRNA_H-elongata_contig13925.2735.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13925 3117..4440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13925.2735.1 ID=prot_H-elongata_contig13925.2735.1|Name=mRNA_H-elongata_contig13925.2735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
DGEDDEEYEIDYNDMNMGPDILRLLGASEEVIAAKEREISSIKWEAPKVA
GLEHSSAIANFDDVALSGGKKGQTSGTTERIFKTIGSYDGPSGVGHAPPT
NTAVLKVKISQAPEAVPKGKESKLPPAPEIGSEDDSSASDTSWDEESVID
GHAWWEDMSDEVDGLNSRISYNLRTAFGLADSVQDPAKTDNNWRPPSSSG
LSNSKPLVTLQPVGVGTYKGMEVKYMRGGEGDGDSRGSTNEGNSQEESGD
EGWDHTDIPDEDYILEWSTNISPNLSSALENAKSPAQLAEKLSREISWRP
PTTYGLGNSAPII
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