prot_H-elongata_contig13915.2726.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13915.2726.1
Unique Nameprot_H-elongata_contig13915.2726.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length232
Homology
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A6H5LHX0_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LHX0_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 1.060e-72
Identity = 127/238 (53.36%), Postives = 147/238 (61.76%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSCGFPETNVECQSVLAANSATEEPSSGNLIEEEE--------SASAEDGTGEEGASTWVIVTVIALAVLVAMAACGACAWRKRWKRLRRLNDMMAPGVDDFC 230
            ME RL+LA+EK CD V PD +E Y   AD T WNITAD+QL YN+W+AD+AHARNLSVGLKND  Q  ELEP+FDWA+STDCY    C  Y  FV   KAV+ AEF V DL +CN T    IDFIVK  ELD  RCSCGFPETN EC  VLA +++                      +  + +G G +G  TWVIVT IA+AVL  M A GA  WR+R     R  D    GVDDFC
Sbjct:  119 MEGRLDLASEKGCDAVDPDFMESYTFSADETGWNITADEQLEYNKWIADQAHARNLSVGLKNDRLQMEELEPWFDWALSTDCYDEEDCGSYGPFVTAGKAVLDAEFAVQDLGLCNDTLWHPIDFIVKSYELDEQRCSCGFPETNFECDEVLAGHASXXXXXXXXXXXXXXXXXXXXXGTDDSGEGQGGDGTPTWVIVTAIAVAVLAGMMAYGAMVWRRR-----RGKDKKVEGVDDFC 351          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A6H5K149_9PHAE (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K149_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.020e-43
Identity = 87/212 (41.04%), Postives = 120/212 (56.60%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDV-FVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSCGFPETNVECQSVLAANSATEEPSSGNLIEEEESASAEDGTGEEGASTWVIVTVIALAVLVAMAACGACAWRKR 211
            M  RL+LAT K C GV P  ++VY    + + +NITA DQLTYN WLA +AH RNLSVGL+ND  Q  +LEP FDWA+S DC   G C  Y+  F+   KAV+  E+   DL+ C++  A  +D I+K L LDA RCSC  P T+++C  +L     T+ P+                   + +S+WVI T +  ++ + +AA     WR R
Sbjct:   73 MRARLDLATNKSCHGVEPSNVQVYL--EENSGFNITASDQLTYNTWLAGQAHDRNLSVGLRNDWLQLDDLEPSFDWALSEDCLFQGECGAYEPNFISAGKAVLDVEYFQFDLAFCDNVTASGLDIIIKDLSLDARRCSCQNPSTHIDCDELL-----TQSPT----------------VAADSSSSWVIATAVGASLFIILAATLVGLWRLR 261          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE)

HSP 1 Score: 127 bits (318), Expect = 4.700e-32
Identity = 61/138 (44.20%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 138
            M  R++LA EK CDG+ PD I+ Y+  +    + +T+++QLTYNRWLA+ AHARNLS+GLKND DQ  +L  YFDWA++  C+    CD+   FV   KAV   E+ +   + C+   + + D++ K L LD+ R SC
Sbjct:  134 MLRRMDLAVEKGCDGIEPDNIDGYSNDS---GFALTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLPFVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSC 268          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI001AD009B8 (Uncharacterized protein n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AD009B8)

HSP 1 Score: 126 bits (317), Expect = 7.770e-32
Identity = 70/141 (49.65%), Postives = 86/141 (60.99%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSV---CNSTYAESIDFIVKGLELDAHRCSC 138
            M  RL+    K  DG+ PD IE YA   + T + +TA DQLTYN WLADEAHAR LS+GLKND DQ  EL PYFDWA++ DC+  G CD    FV   KAV AAE+    ++    C    A + + I+K  ELDA R +C
Sbjct:  138 MRARLDACRAKGFDGIEPDNIEGYA---NATGFPLTAQDQLTYNIWLADEAHARGLSIGLKNDPDQVAELLPYFDWALTEDCFDQGWCDQLTPFVTAGKAVFAAEYTDTGMTTGQFCPQANALNFNGILKHRELDAWRQAC 275          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI001E5098C4 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Massilia sp. TW-1 TaxID=2717319 RepID=UPI001E5098C4)

HSP 1 Score: 124 bits (311), Expect = 1.110e-31
Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 138
            M +R+++A  K CDGV PD ++ Y      T + +TA DQL YN+ +A EAH RNLSVGLKND +Q   L PYFD+A++ +C+    C +Y  F G  KAV   E+ +   + C    A ++DF+ K L LDA+R SC
Sbjct:   73 MGKRMDMAASKGCDGVDPDNVDSYTND---TGFPLTAQDQLDYNKMIAQEAHNRNLSVGLKNDIEQVKVLAPYFDFAINEECFDYNECGVYTAFTGLNKAVFGIEYSLAPTTFCPKANAANMDFLKKRLSLDAYRVSC 207          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A7C4ZPA0_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4ZPA0_9CHLR)

HSP 1 Score: 126 bits (317), Expect = 1.140e-31
Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 138
            M+ RL+LA +K+CDGV PD ++ YA   ++T + +TA DQLTYN WLA+EAHAR LSVGLKND DQ  +L  +FDWA++  C+    CD    FV   KAV   E+ +     C    + + D++ K L LDA R +C
Sbjct:  158 MQARLDLARQKKCDGVEPDNVDGYA---NITGFPLTAQDQLTYNLWLANEAHARRLSVGLKNDLDQVPDLVTHFDWALNEQCFQYDECDKLLPFVQAGKAVFGVEYELSPAQFCPQANSMNFDWLKKKLNLDAWRQAC 292          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI0010F86B4F (endo alpha-1,4 polygalactosaminidase n=1 Tax=Chitinivorax sp. B TaxID=2502235 RepID=UPI0010F86B4F)

HSP 1 Score: 132 bits (331), Expect = 1.340e-31
Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 138
            M +RL+LA  K+CDGV PD I+ Y      T + + A DQL YNRWLA EAH R LS+GLKND DQ  ELEPY+DWA++  C+    CD Y  F+   KAV   E+       C    A   D++ K LELD +R +C
Sbjct:  669 MTKRLDLAASKQCDGVEPDNIDGYTNS---TGFPLKAADQLAYNRWLAQEAHKRGLSIGLKNDVDQIKELEPYYDWALNEQCFQYDECDGYQAFIKAGKAVFGVEYSGSTSGFCAKANAAGYDWLKKRLELDVYRVAC 803          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: G8RVR2_MYCRN (Glyco_hydro_114 domain-containing protein n=1 Tax=Mycolicibacterium rhodesiae (strain NBB3) TaxID=710685 RepID=G8RVR2_MYCRN)

HSP 1 Score: 125 bits (315), Expect = 1.500e-31
Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMY-DVFVGQEKAVVAAEFLVGDL--SVCNSTYAESIDFIVKGLELDAHRCSC 138
            M  RL+LA  + CD V PD ++ Y      T +++TA DQL YNR++A EAH+R LSVGLKND DQ TELEPYFDWA++ +C+T   C  Y D F+   KAV  AE++ G+    VC  T    +  ++K +ELDA   SC
Sbjct:  137 MRRRLDLAATRGCDAVEPDNVDGYRND---TGFDLTAADQLDYNRFIAAEAHSRGLSVGLKNDVDQLTELEPYFDWALNEECFTYNECAQYRDNFLAANKAVFHAEYVNGNRLGEVCAVTERLGLSTLIKNIELDAFALSC 274          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A850BX18_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BX18_9DELT)

HSP 1 Score: 124 bits (311), Expect = 4.220e-31
Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYD-VFVGQEKAVVAAEFLVGDL--SVCNSTYAESIDFIVKGLELDAHRCSC 138
            M+ERL+LA ++ CD V PD ++ Y+   +     +TA DQL YN+++A EAHAR LSVGLKND DQ  ELEP+FDWA++ +C+T   CD+Y   F+   KAV  AE++   +   VC  T    +  ++K +ELDA+R  C
Sbjct:  123 MQERLDLAAQRGCDAVEPDNVDGYS---NKNGLGLTAADQLDYNKFIAAEAHARGLSVGLKNDLDQLAELEPHFDWALNEECFTYSECDLYSPTFIAAGKAVFHAEYVGESMLNEVCVITKPLQLSTLIKHIELDAYRVPC 260          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A0J1DD02_9BURK (Glyco_hydro_114 domain-containing protein n=2 Tax=Massilia TaxID=149698 RepID=A0A0J1DD02_9BURK)

HSP 1 Score: 125 bits (313), Expect = 1.050e-30
Identity = 64/138 (46.38%), Postives = 81/138 (58.70%), Query Frame = 0
Query:    1 MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 138
            M +R+++A  K CDGV PD ++ Y      T + +TA DQL YN+ +A EAH RNLSVGLKND DQ   L PYFDWAM+  C     C +Y  F G  KAV   E+ +     C    A ++DF+ K L LDA R SC
Sbjct:  197 MGKRMDVAASKGCDGVDPDNMDGYTND---TGFPLTAQDQLNYNKMIAQEAHNRNLSVGLKNDVDQVKALAPYFDWAMNEQCNQYKECGVYSAFTGLNKAVFGMEYKLDPAVFCPKANAANLDFLKKRLSLDAMRISC 331          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LHX0_9PHAE1.060e-7253.36Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
A0A6H5K149_9PHAE1.020e-4341.04Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
UPI001969C6AE4.700e-3244.20endo alpha-1,4 polygalactosaminidase n=1 Tax=Desul... [more]
UPI001AD009B87.770e-3249.65Uncharacterized protein n=1 Tax=Thermoflexales bac... [more]
UPI001E5098C41.110e-3144.20endo alpha-1,4 polygalactosaminidase n=1 Tax=Massi... [more]
A0A7C4ZPA0_9CHLR1.140e-3146.38Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaer... [more]
UPI0010F86B4F1.340e-3147.10endo alpha-1,4 polygalactosaminidase n=1 Tax=Chiti... [more]
G8RVR2_MYCRN1.500e-3147.52Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A850BX18_9DELT4.220e-3145.39Endo alpha-1,4 polygalactosaminidase n=1 Tax=Polya... [more]
A0A0J1DD02_9BURK1.050e-3046.38Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004352Glycoside-hydrolase family GH114, TIM-barrel domainPFAMPF03537Glyco_hydro_114coord: 1..132
e-value: 8.8E-28
score: 97.2
NoneNo IPR availablePANTHERPTHR35273FAMILY NOT NAMEDcoord: 1..149
NoneNo IPR availablePANTHERPTHR35273:SF2coord: 1..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 2..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13915contigH-elongata_contig13915:1744..4327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13915.2726.1mRNA_H-elongata_contig13915.2726.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13915 1744..4840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13915.2726.1 ID=prot_H-elongata_contig13915.2726.1|Name=mRNA_H-elongata_contig13915.2726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADE
AHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKA
VVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSCGFPETNVECQSV
LAANSATEEPSSGNLIEEEESASAEDGTGEEGASTWVIVTVIALAVLVAM
AACGACAWRKRWKRLRRLNDMMAPGVDDFCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004352GH114_TIM-barrel
IPR017853Glycoside_hydrolase_SF