mRNA_H-elongata_contig13915.2726.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13915.2726.1
Unique NamemRNA_H-elongata_contig13915.2726.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A6H5LHX0_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LHX0_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 1.230e-88
Identity = 148/276 (53.62%), Postives = 174/276 (63.04%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNINDKEILTVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSCGFPETNVECQSVLAANSATEEPSSGNLIEEEE--------SASAEDGTGEEGASTWVIVTVIALAVLVAMAACGACAWRKRWKRLRRLNDMMAPGVDDFC 818
            ++YR+DE  FPRSALG     S G WW+NIND++I  VME RL+LA+EK CD V PD +E Y   AD T WNITAD+QL YN+W+AD+AHARNLSVGLKND  Q  ELEP+FDWA+STDCY    C  Y  FV   KAV+ AEF V DL +CN T    IDFIVK  ELD  RCSCGFPETN EC  VLA +++                      +  + +G G +G  TWVIVT IA+AVL  M A GA  WR+R     R  D    GVDDFC
Sbjct:   81 EEYRDDEADFPRSALGNRVEHSVGTWWININDEDIKPVMEGRLDLASEKGCDAVDPDFMESYTFSADETGWNITADEQLEYNKWIADQAHARNLSVGLKNDRLQMEELEPWFDWALSTDCYDEEDCGSYGPFVTAGKAVLDAEFAVQDLGLCNDTLWHPIDFIVKSYELDEQRCSCGFPETNFECDEVLAGHASXXXXXXXXXXXXXXXXXXXXXGTDDSGEGQGGDGTPTWVIVTAIAVAVLAGMMAYGAMVWRRR-----RGKDKKVEGVDDFC 351          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A6H5K149_9PHAE (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K149_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 2.670e-50
Identity = 102/248 (41.13%), Postives = 139/248 (56.05%), Query Frame = 3
Query:   24 REDEESFPRSALGYPKYDS-EGEWWVNINDKEILTVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDV-FVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSCGFPETNVECQSVLAANSATEEPSSGNLIEEEESASAEDGTGEEGASTWVIVTVIALAVLVAMAACGACAWRKR 761
            R D + F    LG    D  EGE W+NI  + +LTVM  RL+LAT K C GV P  ++VY    + + +NITA DQLTYN WLA +AH RNLSVGL+ND  Q  +LEP FDWA+S DC   G C  Y+  F+   KAV+  E+   DL+ C++  A  +D I+K L LDA RCSC  P T+++C  +L     T+ P+                   + +S+WVI T +  ++ + +AA     WR R
Sbjct:   37 RIDSDDFESDWLGGGVEDGFEGERWLNITAEGVLTVMRARLDLATNKSCHGVEPSNVQVYL--EENSGFNITASDQLTYNTWLAGQAHDRNLSVGLRNDWLQLDDLEPSFDWALSEDCLFQGECGAYEPNFISAGKAVLDVEYFQFDLAFCDNVTASGLDIIIKDLSLDARRCSCQNPSTHIDCDELL-----TQSPT----------------VAADSSSSWVIATAVGASLFIILAATLVGLWRLR 261          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A7C4ZPA0_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4ZPA0_9CHLR)

HSP 1 Score: 148 bits (374), Expect = 1.490e-39
Identity = 77/177 (43.50%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNINDKEIL-TVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 542
            +D+R D   FP + +G P  D  GE W++I   ++L  +M+ RL+LA +K+CDGV PD ++ YA   ++T + +TA DQLTYN WLA+EAHAR LSVGLKND DQ  +L  +FDWA++  C+    CD    FV   KAV   E+ +     C    + + D++ K L LDA R +C
Sbjct:  119 EDWRSDASQFPNTVIGQPLDDWPGEKWLDIRRLDLLGPIMQARLDLARQKKCDGVEPDNVDGYA---NITGFPLTAQDQLTYNLWLANEAHARRLSVGLKNDLDQVPDLVTHFDWALNEQCFQYDECDKLLPFVQAGKAVFGVEYELSPAQFCPQANSMNFDWLKKKLNLDAWRQAC 292          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI001E5098C4 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Massilia sp. TW-1 TaxID=2717319 RepID=UPI001E5098C4)

HSP 1 Score: 142 bits (359), Expect = 2.620e-38
Identity = 75/177 (42.37%), Postives = 106/177 (59.89%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNINDKEIL-TVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 542
            +D+RED  SFP S LG        E W++I    +L ++M +R+++A  K CDGV PD ++ Y      T + +TA DQL YN+ +A EAH RNLSVGLKND +Q   L PYFD+A++ +C+    C +Y  F G  KAV   E+ +   + C    A ++DF+ K L LDA+R SC
Sbjct:   34 EDWREDAASFPASVLGNTLDGWPDERWLDIRQLTVLRSIMGKRMDMAASKGCDGVDPDNVDSYTND---TGFPLTAQDQLDYNKMIAQEAHNRNLSVGLKNDIEQVKVLAPYFDFAINEECFDYNECGVYTAFTGLNKAVFGIEYSLAPTTFCPKANAANMDFLKKRLSLDAYRVSC 207          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: G8RVR2_MYCRN (Glyco_hydro_114 domain-containing protein n=1 Tax=Mycolicibacterium rhodesiae (strain NBB3) TaxID=710685 RepID=G8RVR2_MYCRN)

HSP 1 Score: 142 bits (359), Expect = 1.590e-37
Identity = 80/177 (45.20%), Postives = 108/177 (61.02%), Query Frame = 3
Query:   24 REDEESFPRSALGYPKYDS-EGEWWVNINDKEILTVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMY-DVFVGQEKAVVAAEFLVGDL--SVCNSTYAESIDFIVKGLELDAHRCSC 542
            R D   FP +A G P     + E W++I + E+ TVM  RL+LA  + CD V PD ++ Y      T +++TA DQL YNR++A EAH+R LSVGLKND DQ TELEPYFDWA++ +C+T   C  Y D F+   KAV  AE++ G+    VC  T    +  ++K +ELDA   SC
Sbjct:  101 RPDAAEFPAAANGNPLDPPFQDELWLDIRNPEVRTVMRRRLDLAATRGCDAVEPDNVDGYRND---TGFDLTAADQLDYNRFIAAEAHSRGLSVGLKNDVDQLTELEPYFDWALNEECFTYNECAQYRDNFLAANKAVFHAEYVNGNRLGEVCAVTERLGLSTLIKNIELDAFALSC 274          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A7V5U264_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Thermodesulfatator atlanticus TaxID=501497 RepID=A0A7V5U264_9BACT)

HSP 1 Score: 141 bits (356), Expect = 5.250e-37
Identity = 75/175 (42.86%), Postives = 102/175 (58.29%), Query Frame = 3
Query:   21 YREDEESFPRSALGYPKYDSEGEWWVNINDKEIL-TVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 542
            +R D E FP   LG P  D   E W++I   ++L  +ME RL+LA EK CDGV PD ++ Y    + + + +T +DQL YN WLA++AH R LSVGLKND DQ   LEPYFDWA++ +C+  G C+    F+ + KAV   E+ +     C    A     + K  ELDA R +C
Sbjct:  107 WRPDAEKFPEEILGEPLVDWPDERWLDIRRLDVLGPIMEARLDLAVEKGCDGVEPDNVDAYQ---NESGFPLTYEDQLNYNLWLAEQAHKRGLSVGLKNDLDQIPALEPYFDWALNEECFYYGECEKLRPFIEKGKAVFQVEYYLDPEDFCPEANAMGFSSMKKRPELDAWRIAC 278          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI001AD009B8 (Uncharacterized protein n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AD009B8)

HSP 1 Score: 140 bits (354), Expect = 8.940e-37
Identity = 80/180 (44.44%), Postives = 106/180 (58.89%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNIND-KEILTVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSV---CNSTYAESIDFIVKGLELDAHRCSC 542
            +++R D + FP + LG       GE W++I    ++  +M  RL+    K  DG+ PD IE YA   + T + +TA DQLTYN WLADEAHAR LS+GLKND DQ  EL PYFDWA++ DC+  G CD    FV   KAV AAE+    ++    C    A + + I+K  ELDA R +C
Sbjct:   99 EEWRPDADQFPPAVLGNDYEGWPGEKWLDIRQIDQLAPIMRARLDACRAKGFDGIEPDNIEGYA---NATGFPLTAQDQLTYNIWLADEAHARGLSIGLKNDPDQVAELLPYFDWALTEDCFDQGWCDQLTPFVTAGKAVFAAEYTDTGMTTGQFCPQANALNFNGILKHRELDAWRQAC 275          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE)

HSP 1 Score: 140 bits (353), Expect = 1.060e-36
Identity = 73/177 (41.24%), Postives = 108/177 (61.02%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNINDKEIL-TVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 542
            ++YR+D   FP   LG        E W++I+  +IL  +M  R++LA EK CDG+ PD I+ Y+  +    + +T+++QLTYNRWLA+ AHARNLS+GLKND DQ  +L  YFDWA++  C+    CD+   FV   KAV   E+ +   + C+   + + D++ K L LD+ R SC
Sbjct:   95 ENYRDDANVFPEEVLGKYLDGWPDERWLDISRIDILGPIMLRRMDLAVEKGCDGIEPDNIDGYSNDS---GFALTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLPFVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSC 268          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A0J1DD02_9BURK (Glyco_hydro_114 domain-containing protein n=2 Tax=Massilia TaxID=149698 RepID=A0A0J1DD02_9BURK)

HSP 1 Score: 141 bits (356), Expect = 1.800e-36
Identity = 77/177 (43.50%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNINDKEILT-VMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSC 542
            ++YR D+ SFP S LG        E W++I    +L  +M +R+++A  K CDGV PD ++ Y      T + +TA DQL YN+ +A EAH RNLSVGLKND DQ   L PYFDWAM+  C     C +Y  F G  KAV   E+ +     C    A ++DF+ K L LDA R SC
Sbjct:  158 ENYRSDKASFPASVLGKVMDGWPDERWLDIRQLTVLRGIMGKRMDVAASKGCDGVDPDNMDGYTND---TGFPLTAQDQLNYNKMIAQEAHNRNLSVGLKNDVDQVKALAPYFDWAMNEQCNQYKECGVYSAFTGLNKAVFGMEYKLDPAVFCPKANAANLDFLKKRLSLDAMRISC 331          
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE)

HSP 1 Score: 138 bits (348), Expect = 2.220e-36
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 3
Query:   15 QDYREDEESFPRSALGYPKYDSEGEWWVNINDKEILTVMEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADEAHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKAVVAAEFLVGDLS--VCNSTYAESIDFIVKGLELDAHRCSC 542
            +D+R D   FP +ALG P     GE W++     +  VM+ RL+LA +K CDGV PD ++ Y  G+    + +TA  QL YNR+LA EAHAR LS+GLKND DQ  +L  +FDWA++ +C+    C+M   F+   KAV  AE++    +  VC  T    +  ++K L+LDA R +C
Sbjct:   57 EDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYTNGS---GFPLTAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDECEMLTPFIRAGKAVFHAEYVAASQANAVCADTKPLGLSTLIKRLDLDAWRVAC 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13915.2726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LHX0_9PHAE1.230e-8853.62Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
A0A6H5K149_9PHAE2.670e-5041.13Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A7C4ZPA0_9CHLR1.490e-3943.50Endo alpha-1,4 polygalactosaminidase n=1 Tax=Anaer... [more]
UPI001E5098C42.620e-3842.37endo alpha-1,4 polygalactosaminidase n=1 Tax=Massi... [more]
G8RVR2_MYCRN1.590e-3745.20Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A7V5U264_9BACT5.250e-3742.86Endo alpha-1,4 polygalactosaminidase n=1 Tax=Therm... [more]
UPI001AD009B88.940e-3744.44Uncharacterized protein n=1 Tax=Thermoflexales bac... [more]
UPI001969C6AE1.060e-3641.24endo alpha-1,4 polygalactosaminidase n=1 Tax=Desul... [more]
A0A0J1DD02_9BURK1.800e-3643.50Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
A0A150SSH0_SORCE2.220e-3641.57Endo alpha-1,4 polygalactosaminidase n=3 Tax=Soran... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13915contigH-elongata_contig13915:1744..4840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score127.5
Seed ortholog evalue8.2e-27
Seed eggNOG ortholog1121403.AUCV01000013_gene3919
KEGG koko:K21006
KEGG Pathwayko02025,map02025
EggNOG free text desc.Glycoside-hydrolase family GH114
EggNOG OGs1PIK8@1224,2WUIV@28221,42QZ4@68525,COG3868@1,COG3868@2
COG Functional cat.S
Best tax levelDeltaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons6
Model size824
Cds size696
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929825.6166859-CDS-H-elongata_contig13915:1743..20581622929825.6166859-CDS-H-elongata_contig13915:1743..2058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 1744..2058 -
1691679173.8961341-CDS-H-elongata_contig13915:1743..20581691679173.8961341-CDS-H-elongata_contig13915:1743..2058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 1744..2058 -
1622929825.6289587-CDS-H-elongata_contig13915:2708..28221622929825.6289587-CDS-H-elongata_contig13915:2708..2822Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 2709..2822 -
1691679173.908474-CDS-H-elongata_contig13915:2708..28221691679173.908474-CDS-H-elongata_contig13915:2708..2822Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 2709..2822 -
1622929825.644696-CDS-H-elongata_contig13915:3253..33701622929825.644696-CDS-H-elongata_contig13915:3253..3370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 3254..3370 -
1691679173.9212244-CDS-H-elongata_contig13915:3253..33701691679173.9212244-CDS-H-elongata_contig13915:3253..3370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 3254..3370 -
1622929825.657206-CDS-H-elongata_contig13915:3894..39781622929825.657206-CDS-H-elongata_contig13915:3894..3978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 3895..3978 -
1691679173.9299338-CDS-H-elongata_contig13915:3894..39781691679173.9299338-CDS-H-elongata_contig13915:3894..3978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 3895..3978 -
1622929825.730537-CDS-H-elongata_contig13915:4261..43271622929825.730537-CDS-H-elongata_contig13915:4261..4327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 4262..4327 -
1691679173.9383235-CDS-H-elongata_contig13915:4261..43271691679173.9383235-CDS-H-elongata_contig13915:4261..4327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13915 4262..4327 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929825.8344617-UTR-H-elongata_contig13915:4327..43421622929825.8344617-UTR-H-elongata_contig13915:4327..4342Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13915 4328..4342 -
1691679173.9468062-UTR-H-elongata_contig13915:4327..43421691679173.9468062-UTR-H-elongata_contig13915:4327..4342Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13915 4328..4342 -
1622929825.8526146-UTR-H-elongata_contig13915:4727..48401622929825.8526146-UTR-H-elongata_contig13915:4727..4840Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13915 4728..4840 -
1691679173.955791-UTR-H-elongata_contig13915:4727..48401691679173.955791-UTR-H-elongata_contig13915:4727..4840Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13915 4728..4840 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13915.2726.1prot_H-elongata_contig13915.2726.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13915 1744..4327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13915.2726.1

>prot_H-elongata_contig13915.2726.1 ID=prot_H-elongata_contig13915.2726.1|Name=mRNA_H-elongata_contig13915.2726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MEERLNLATEKECDGVAPDEIEVYALGADVTNWNITADDQLTYNRWLADE
AHARNLSVGLKNDADQATELEPYFDWAMSTDCYTLGLCDMYDVFVGQEKA
VVAAEFLVGDLSVCNSTYAESIDFIVKGLELDAHRCSCGFPETNVECQSV
LAANSATEEPSSGNLIEEEESASAEDGTGEEGASTWVIVTVIALAVLVAM
AACGACAWRKRWKRLRRLNDMMAPGVDDFCG*
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mRNA from alignment at H-elongata_contig13915:1744..4840-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13915.2726.1 ID=mRNA_H-elongata_contig13915.2726.1|Name=mRNA_H-elongata_contig13915.2726.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3097bp|location=Sequence derived from alignment at H-elongata_contig13915:1744..4840- (Himanthalia elongata Himel1 dioecious)
CAACCCCTGACTGACAGGACTATCGAGAGGACGAGGAAAGCTTCCCGCGG TCTGCGCTCGGATATCCAAAATATGATTCAGAGGGGGAGTGGTGGGTCAA TATCAACGACAAGGTGGGTTATCCACCTAAGGTCCTGAGGTGGAGGTGCC TCTATCTATTTGCGTGTCTGGAGGGGTGTCTCTTTCTGTTTCTACTCGTA TTTCCGTGTCTGTTTTTCTGTGTCTATGTCTCTCTGTTATGCTTGTTTAT ATGATTTGATTTGATTTGATTTATCTCAAATCTGTTTTTGTTTTTGTCTG TATCTTGTCTTTCTTTTTGTCTATCTCAATGTATGAATGTCGCCATTCCA CGTTGTTACCCGTCTCGGTTAATACCCCCCCCCCCCCCCCCCCCCCTCTT CTTTTTTTTTTTTTTTTTATAATTATTATTTCCTTTTTTTTCCCTTCTTG GTTATTTCCCCCCCCCCCCCCTTCCCCTTAATGCTTTCTTTGTTCTAGGA AATATTGACTGTGATGGAGGAGCGACTAAATTTGGCAACGGAGAAAGAGT GCGACGGGGTTGCGCCTGATGAAATAGAGGTGTGCGACGGTACACGTCTG CCTGGCGCGAACATAGCCTGTGTGACGTATCCCAGCGCGTCTTCTTAAAA GAGAGCCCCCAGCTGCGCCGAGAGCTCCACGTTCGCGTGTCATAAATCCC AAGGGATTCCAGACGGAGATCCGTAGTACCATGCCCAGGCGATATCGGTC GCTCTGTCGCCCTTCAATATCGAACTGTGCATGCAGGATTCGGGACTACA TAAATTATGAGGCAATCTAATCAGTTTTTTTACCAATCGAAGTTGTTACC GGGAAAACACAGGTGTACGCGCTCGGCGCCGACGTCACGAACTGGAACAT AACTGCCGACGATCAACTTACTTACAATCGATGGCTTGCCGATGAGGTAG TGTCTCTACTGCCAGCAAATGCTCTATTAGTAATAGTCGCGAGTTGCTTC CTTTATGGTTTACACGTATTCGGGAGAGGGGGGTAATGGGAGGCGTACAA CTACATTTTGATTGTCTGGTGGTTCTCGTGCGCATATATATGTATATATA TATATATATATATACAACGTGTGACTGTTTACTTTGATTACCGAGATGGC GGACTCTTGGCATCGCTTGTGAGCACGAAGAAGTACTTATTCACTTCGAT AGATATTGCCCAAAACCTGCCTGGCGTTTGTACGCTAACTGCATGTATAG TGGTACCCCCCCCACCCCCCCTCGTACTGAGGCTTCACGCCGACGCAACC AAACCCGATGAGCAATATCACTATGGACAAGTTCGTGGTCTTTAGATCGC ATCTCTCAGGGCGAGTGGCGGTGGTTACTTTTCGTCGAGTGAAGAATCCT TGGAAGACAACGCGATCTTCACTCGTGAACGTACGCATGCACGCACGCAC GTACACGCGTACCCCGTCAGGCGCACGCTCGAAATCTTTCAGTGGGCTTG AAGAACGATGCGGACCAAGCGACTGAGCTTGAGCCATATTTCGATTGGGC GATGAGTACGGATTGCTACACACTGGGGCTTTGTGATGTGAGTGAGGCAC GGAAGGATAGCCACGACAAGAAACGGTGCCCCACCTCGAATTCTATGCGG CGCGCTGCTCACTCCACGGTTGAATTTCGAGTTTCGTTGAATCCCCTTTT TTGGCCTGCTGTCGAAGCCGTAGCGAGGGTCCAGGGAGAATGAGGAGGCG TGTCTTTCGTCTCGACATCCTGCATCTTCGAGGGGTCAAATGGAGCGGTA ACCCCGTAAACAGCTTTCCCCCGTGCGGTCATTCAGAGATGTAGTCCCTT TTTGTATCCCCGACTGGCTTGTGAAAGCATCGTATCCTCCTCTCCTTCTC CCCCAACCATCCTTTCGTGTCTTGGGCTTTCTCTCTTTGCGCCCACCGTT CCCGCAAGTCTAATATAGACTTGTGTGCATCGTGTTCTGTCTTCCGATTG ATCGTATTTCCTCTTTAGATGTACGATGTGTTCGTGGGGCAGGAAAAGGC CGTCGTTGCCGCTGAGTTCTTGGTGGGGGACCTTTCCGTTTGTAATTCTA CCTATGCTGAGTCCATCGACTTCATCGTAAAGGTACGGACTGCTCCGTTT ACTGATCGACGATGCGCGGTGCTGCGGTTCGAGACAATAAGTAAGACATA CCCCCTCTAACACACGCGCACGTACTCATGCACACACATACGCACACGCA CACGCACATGCATTGGTTTTGTGCTGCCGAAGCTGAACCCCCTGTATTTA GTTTCGGAAGAAAGCTGGGGATGTCGTAAGATAGGGCGTATTAATATTAC CCTATCTTTGAAGCTCAGCGATAGAGCTAAGTGAAAAGGATTGACAAGGG CGGAATAGCTTGTGGATCATAAGAGGAGAGTAGTCGAAATGCGGCTTTTC TAAGGACAAAAGTCCATCAATACAGATGGGATAATGTATGTATGACCGGC TGTGTGCACCAACAACCTTAGAGAGCATCGTAAATGAGTGGGGAAATATG GAAAAAGAGAGCATCCCGCCCCCCACCCCCCTTTCGCAATAATTTTCGGA AGAGGCGAGGTCTGTATAGAAATAACTTCTTTTGCTGCATTGAAAAACGT CAGTTGTCCTATTTTACTACCGCTAACCGCGCTCCGCAAACATCACACCC CACCCCCCACCTCCTCGTACCACACACACACACCAACATCACTGGCTCCT GGCATGATGCTCACACCCCTGGAACCACGCAGGGGTTGGAATTAGACGCC CATCGGTGTAGCTGTGGATTCCCGGAGACGAACGTCGAATGTCAGTCGGT CTTGGCCGCTAACAGTGCGACAGAGGAACCGAGCAGCGGGAACTTGATAG AGGAAGAGGAGTCTGCCTCCGCGGAGGACGGCACGGGCGAGGAAGGAGCT TCGACCTGGGTGATCGTAACAGTCATTGCACTTGCGGTGCTTGTTGCCAT GGCTGCCTGCGGGGCGTGCGCATGGCGTAAGAGATGGAAGAGACTCCGCC GGTTGAACGACATGATGGCCCCAGGAGTGGATGACTTTTGCGGTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig13915:1744..4840-

>mRNA_H-elongata_contig13915.2726.1 ID=mRNA_H-elongata_contig13915.2726.1|Name=mRNA_H-elongata_contig13915.2726.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig13915:1744..4840- (Himanthalia elongata Himel1 dioecious)
ATGGAGGAGCGACTAAATTTGGCAACGGAGAAAGAGTGCGACGGGGTTGC
GCCTGATGAAATAGAGATGGAGGAGCGACTAAATTTGGCAACGGAGAAAG
AGTGCGACGGGGTTGCGCCTGATGAAATAGAGGTGTACGCGCTCGGCGCC
GACGTCACGAACTGGAACATAACTGCCGACGATCAACTTACTTACAATCG
ATGGCTTGCCGATGAGGTGTACGCGCTCGGCGCCGACGTCACGAACTGGA
ACATAACTGCCGACGATCAACTTACTTACAATCGATGGCTTGCCGATGAG
GCGCACGCTCGAAATCTTTCAGTGGGCTTGAAGAACGATGCGGACCAAGC
GACTGAGCTTGAGCCATATTTCGATTGGGCGATGAGTACGGATTGCTACA
CACTGGGGCTTTGTGATGCGCACGCTCGAAATCTTTCAGTGGGCTTGAAG
AACGATGCGGACCAAGCGACTGAGCTTGAGCCATATTTCGATTGGGCGAT
GAGTACGGATTGCTACACACTGGGGCTTTGTGATATGTACGATGTGTTCG
TGGGGCAGGAAAAGGCCGTCGTTGCCGCTGAGTTCTTGGTGGGGGACCTT
TCCGTTTGTAATTCTACCTATGCTGAGTCCATCGACTTCATCGTAAAGAT
GTACGATGTGTTCGTGGGGCAGGAAAAGGCCGTCGTTGCCGCTGAGTTCT
TGGTGGGGGACCTTTCCGTTTGTAATTCTACCTATGCTGAGTCCATCGAC
TTCATCGTAAAGGGGTTGGAATTAGACGCCCATCGGTGTAGCTGTGGATT
CCCGGAGACGAACGTCGAATGTCAGTCGGTCTTGGCCGCTAACAGTGCGA
CAGAGGAACCGAGCAGCGGGAACTTGATAGAGGAAGAGGAGTCTGCCTCC
GCGGAGGACGGCACGGGCGAGGAAGGAGCTTCGACCTGGGTGATCGTAAC
AGTCATTGCACTTGCGGTGCTTGTTGCCATGGCTGCCTGCGGGGCGTGCG
CATGGCGTAAGAGATGGAAGAGACTCCGCCGGTTGAACGACATGATGGCC
CCAGGAGTGGATGACTTTTGCGGTTGAGGGTTGGAATTAGACGCCCATCG
GTGTAGCTGTGGATTCCCGGAGACGAACGTCGAATGTCAGTCGGTCTTGG
CCGCTAACAGTGCGACAGAGGAACCGAGCAGCGGGAACTTGATAGAGGAA
GAGGAGTCTGCCTCCGCGGAGGACGGCACGGGCGAGGAAGGAGCTTCGAC
CTGGGTGATCGTAACAGTCATTGCACTTGCGGTGCTTGTTGCCATGGCTG
CCTGCGGGGCGTGCGCATGGCGTAAGAGATGGAAGAGACTCCGCCGGTTG
AACGACATGATGGCCCCAGGAGTGGATGACTTTTGCGGTTGA
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