prot_H-elongata_contig13914.2723.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13914.2723.1
Unique Nameprot_H-elongata_contig13914.2723.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13914.2723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 112..128
e-value: 0.0017
score: 27.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 111..127
e-value: 8.9E-6
score: 25.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 111..127
score: 10.757
NoneNo IPR availableGENE3D4.10.60.10coord: 89..135
e-value: 1.6E-6
score: 29.9
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 106..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13914contigH-elongata_contig13914:5788..6195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13914.2723.1mRNA_H-elongata_contig13914.2723.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13914 5788..6195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13914.2723.1 ID=prot_H-elongata_contig13914.2723.1|Name=mRNA_H-elongata_contig13914.2723.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MEPGGDPFKFMMEVDRLAADLNRLGDESVTEKRKCVITVSGLPTDYEMEC
RMLENNPVGLNRAEIERAVWNQYNRLFRQQENLKAMSASKGHITVNPGTG
VDRIHHPRFNRKCFNCGKGGHHARDCRMSEESGATD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf