mRNA_H-elongata_contig13857.2694.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: D7G408_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G408_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.430e-86 Identity = 126/169 (74.56%), Postives = 148/169 (87.57%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDDL 519
+AVIFLAS+DE GSAGFILNRPTS++LG+L+EG+AL F++ PLYLGGDVG EGNVQI+HPFGP++L +MEIIPGV IGG+++EA MV +G AK DDF+F LHLCGWAPGQLE EI+RGVW P ATS+NVI+KHCL LP P+WREVMTLMGPKYGLLARDTYDDL
Sbjct: 224 EAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKTPLYLGGDVG---EGNVQILHPFGPEKLTDSMEIIPGVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 389
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: A0A6H5K1D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D3_9PHAE) HSP 1 Score: 223 bits (567), Expect = 3.720e-70 Identity = 116/195 (59.49%), Postives = 138/195 (70.77%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSRE-----------------GNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNV---------IMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDDL 519
+AVIFLAS+DE GSAGFILNRPTS++LG+L+EG+AL F+++PLYLGGDV +SR+ V P PDRL+ P V IGG+++EA MV +G AK DDF+F LHLCGWAPGQLE EI+RGVW P ATS+NV I+KHCL LP P+WREVMTLMGPKYGLLARDTYDDL
Sbjct: 96 EAVIFLASYDEAGSAGFILNRPTSVQLGDLVEGNALRQFQKSPLYLGGDVVSSRKQGQIDCSTSHESSRLPPSTVVFAAPLSPDRLSA-----PQVYIGGAVDEADRMVASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVSCKNNWRQVILKHCLSLPVPMWREVMTLMGPKYGLLARDTYDDL 285
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: A0A836C8M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M7_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.720e-49 Identity = 87/169 (51.48%), Postives = 110/169 (65.09%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDDL 519
QAVIFL H+ NGS GF+LNRPT +G + G + F PL GGD+G G VQ+VH F +R+ GA +II GV +GG + +A V G AK DF+FFL L G APG L+AE++ G W AATS +I+K C+ LP PLWREV+TLMG K+ +L R TY DL
Sbjct: 137 QAVIFLVQHNANGSVGFVLNRPTQFTIGTVTTG--MEVFNACPLMWGGDLG---RGTVQMVHAFDAERMPGARKIIDGVYVGGGVLDAQEAVARGQAKPGDFKFFLQLFGKAPGHLQAEMDAGKWICAATSKELILKPCINLPVPLWREVLTLMGGKHSILGRLTYGDL 300
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: C1MN92_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MN92_MICPC) HSP 1 Score: 149 bits (376), Expect = 1.450e-40 Identity = 79/168 (47.02%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDD 516
QAVI + H E GS G ILNRPT +G + D+ P F N LY GGDVG +G V +H G +AG E++PGV +GG + A +V G K DF+FF CGWAPGQLE+E ERGVW+P A S + +K +QLP PLWREVM L G + ++ +Y +
Sbjct: 200 QAVILVLEHHEKGSMGVILNRPTQYNMGYVGGDDSSP-FANNQLYFGGDVG---DGTVSFLH--GSSEVAGGSEVLPGVYLGG-YDSACELVKDGTLKPTDFKFFARYCGWAPGQLESECERGVWYPVACSRQLALKQVIQLPKPLWREVMELCGGELRQTSKRSYGE 360
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: A0A1Y5IDK1_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IDK1_OSTTA) HSP 1 Score: 147 bits (371), Expect = 3.060e-40 Identity = 78/170 (45.88%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAK--RDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDD 516
QAVI + H ENGS G ILNRPT +G + G+ F EN LY GGDVG +G V +H G + + G++E++PGV +GG E A +V G+ D+F+FF CGWAPGQLE+E ERGVW+P A + + +K +QLP PLWRE++ L G + +A Y D
Sbjct: 142 QAVILVLEHHENGSMGIILNRPTQYNMG-YVSGEPSGPFAENALYFGGDVG---DGTVSFLH--GREDVKGSVEVLPGVYLGG-YESACELVQQDGSTCHPDEFKFFARYCGWAPGQLESECERGVWYPIAAAKELSLKQVIQLPKPLWREILELCGGELADIAARAYQD 304
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: A4S673_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S673_OSTLU) HSP 1 Score: 145 bits (367), Expect = 5.600e-40 Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAK--RDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTY 510
QAVI + H ENGS G ILNRPT +G + G+A F +N LY GGDVG +G V +H G + + G++E++PGV +GG + A +V G+ D+F+FF CGWAPGQLE+E ERGVWFP A + + +K +QLP PLWRE+ L G + +AR Y
Sbjct: 105 QAVILVLEHHENGSMGVILNRPTQYDMG-YVSGEANGPFAKNALYFGGDVG---DGTVSFLH--GREDVKGSVEVLPGVYLGG-YDSACELVQQDGSTCHADEFKFFARYCGWAPGQLESECERGVWFPVAAAKELSLKQVIQLPKPLWREISELCGGELEEMARKAY 265
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: A0A7S0PMA6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PMA6_9CHLO) HSP 1 Score: 142 bits (358), Expect = 2.460e-38 Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWRE 459
QAVI + H ENGS G ILNRPT +G + GD F +N LY GGDVG +G V +H G + + G++E++PG+ +GG + A +V GAK D+F+FF CGWAPGQLE+E ERGVWFP A + + +K +QLP PLWRE
Sbjct: 176 QAVILVLEHHENGSMGVILNRPTQYDMG-YVSGDVDGVFAKNALYFGGDVG---DGTVSFLH--GREDVKGSVEVLPGMYLGG-YDSACALVEEQGAKPDEFKFFARYCGWAPGQLESECERGVWFPVAGAKELALKQVIQLPKPLWRE 317
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: A0A7S0D198_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D198_MICPS) HSP 1 Score: 144 bits (362), Expect = 2.990e-38 Identity = 75/168 (44.64%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDD 516
QAVI + H+E GS G ILNRPT +G + GD F +N LY GGDVG +G V +H G + G++E+ GV +GG E A +V G + +D +FF CGW PGQL++E ERGVW+P A S + +K +QLP PLWREV L+G G +R Y +
Sbjct: 216 QAVILMLEHNEKGSMGVILNRPTQYSMG-YVSGDESGPFAQNALYFGGDVG---DGTVSFLH--GSSSVTGSVEVSAGVFLGG-YESACELVKTGEVEANDCKFFARYCGWGPGQLQSECERGVWYPVACSKQIALKQVIQLPKPLWREVSELVGGDVGYESRKAYGE 376
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: K8EAP8_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EAP8_9CHLO) HSP 1 Score: 141 bits (356), Expect = 1.170e-37 Identity = 76/166 (45.78%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTY 510
Q VI L H ++GS G ILNRPT ++ +++ + P F EN LY GGDVG +G V +H G +A A E+ PGV IGG +AG +V G +F+FF CGWAPGQLE E RGVW+P A S + +K + LP PLWREV+ L G + L A+ Y
Sbjct: 193 QCVILLLEHSKDGSMGVILNRPTMYKMADVVNDENGP-FSENALYFGGDVG---DGTVSFLH--GSPDVADAEEVSPGVFIGG-FNDAGRLVKEGKKDPREFKFFARYCGWAPGQLEDECARGVWYPVACSRQIALKPVIALPKPLWREVLELCGGELALKAKRAY 351
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Match: C1E5G6_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E5G6_MICCC) HSP 1 Score: 141 bits (355), Expect = 2.090e-37 Identity = 74/168 (44.05%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 13 QAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLGGDVGTSREGNVQIVHPFGPDRLAGAMEIIPGVCIGGSIEEAGHMVTAGGAKRDDFRFFLHLCGWAPGQLEAEIERGVWFPAATSSNVIMKHCLQLPTPLWREVMTLMGPKYGLLARDTYDD 516
QAVI L H + GS G ILNRPT +G + G + F EN LY GGDVG +G V +H G D++ G+ E++PGV +GG + A +V ++F+FF CGWAPGQL+ E ERGVW+P A S + +K +QLP PLWRE++ L G + A Y +
Sbjct: 204 QAVILLLEHHDKGSMGVILNRPTQYNMG-YVSGQSDGPFAENALYFGGDVG---DGTVSFLH--GSDKVQGSAEVLPGVYLGG-YDSACELVKKEEVDANEFKFFARYCGWAPGQLKRECERGVWYPVACSKQLALKQVIQLPKPLWREILELCGGELKSAAARAYGE 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13857.2694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13857.2694.1 >prot_H-elongata_contig13857.2694.1 ID=prot_H-elongata_contig13857.2694.1|Name=mRNA_H-elongata_contig13857.2694.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp MRVLQAVIFLASHDENGSAGFILNRPTSMRLGELLEGDALPWFRENPLYLback to top mRNA from alignment at H-elongata_contig13857:3276..5105- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13857.2694.1 ID=mRNA_H-elongata_contig13857.2694.1|Name=mRNA_H-elongata_contig13857.2694.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1830bp|location=Sequence derived from alignment at H-elongata_contig13857:3276..5105- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13857:3276..5105- >mRNA_H-elongata_contig13857.2694.1 ID=mRNA_H-elongata_contig13857.2694.1|Name=mRNA_H-elongata_contig13857.2694.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1044bp|location=Sequence derived from alignment at H-elongata_contig13857:3276..5105- (Himanthalia elongata Himel1 dioecious)back to top |