prot_H-elongata_contig138541.2691.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig138541.2691.1
Unique Nameprot_H-elongata_contig138541.2691.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: D8LJ46_ECTSI (Similar to deoxynucleotidyltransferase, terminal, interacting protein 2, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ46_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 4.900e-28
Identity = 52/75 (69.33%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGGLKWKP 75
            Q+GTVKEGP E+FSSR+ NK+RKKTLVDELLVAD+ FRAY+KNQY SIQ++K++GGK  Y +  RKR GG++WKP
Sbjct:  465 QIGTVKEGPSEYFSSRMTNKERKKTLVDELLVADDAFRAYSKNQYGSIQSRKRAGGKAAYNDQKRKRKGGMQWKP 539          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A397U2L9_9GLOM (Fcf2 pre-rRNA processing-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U2L9_9GLOM)

HSP 1 Score: 78.2 bits (191), Expect = 1.110e-16
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKR 67
            Q+GTV EGP EF+SSRL  K+RKKT+VDEL+ ADE  + Y K ++  IQ  K+SGGK HYK+L +KR
Sbjct:   71 QIGTVIEGPTEFYSSRLTRKERKKTIVDELM-ADEEAKKYYKRKFLEIQKTKQSGGKKHYKQLKKKR 136          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A8H6CHT9_9LECA (Fcf2 domain-containing protein n=2 Tax=Letharia TaxID=112415 RepID=A0A8H6CHT9_9LECA)

HSP 1 Score: 78.2 bits (191), Expect = 6.470e-16
Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGGLK 72
            Q+G + EGP E++SSRLPNK+RK+TLV E+L A+E +    K +YN IQA K SG + +YK+L  KR+GG++
Sbjct:  159 QIGQIIEGPTEYYSSRLPNKERKRTLVGEIL-ANEKYTGRFKKKYNEIQASKTSGKRAYYKKLKEKRSGGIR 229          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A3D8SSZ5_9HELO (Putative rRNA-processing protein fcf2 n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8SSZ5_9HELO)

HSP 1 Score: 77.8 bits (190), Expect = 7.680e-16
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGG 70
            QVGT+ EGP EFFS+RL NK+RK+T V+E+L  + + + + K++YN IQ+KK SG K HYK+L  KR GG
Sbjct:  152 QVGTIIEGPTEFFSARLSNKERKRTFVEEVLAGESSTQKF-KSKYNEIQSKKISGKKAHYKKLKGKRRGG 220          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A397TD17_9GLOM (Fcf2 pre-rRNA processing-domain-containing protein (Fragment) n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TD17_9GLOM)

HSP 1 Score: 75.1 bits (183), Expect = 1.070e-15
Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKR 67
            +VGT+KEGP +F+SSR+P K+RK+T+ DEL+ ADE  ++Y K +++ IQ  K+SGGK ++K+L  KR
Sbjct:   50 EVGTIKEGPTDFYSSRIPRKERKQTIADELM-ADEQSKSYFKRKFSEIQEVKQSGGKKYFKQLKTKR 115          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A8H3IB41_9LECA (Fcf2 domain-containing protein n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3IB41_9LECA)

HSP 1 Score: 77.4 bits (189), Expect = 1.230e-15
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGGLK 72
            Q+GT  +GP EF+SSR+PNK+RKK  VDE+L A+E+   + K++YN IQ+ K SG K +YK+L  KR+ G++
Sbjct:  157 QIGTFIQGPTEFYSSRIPNKERKKNFVDEVLTAEESTGRF-KSRYNDIQSSKMSGKKAYYKKLKNKRSNGIR 227          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: M2ZTK8_PSEFD (Fcf2 domain-containing protein n=4 Tax=Pseudocercospora TaxID=131324 RepID=M2ZTK8_PSEFD)

HSP 1 Score: 76.6 bits (187), Expect = 2.970e-15
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGGLK 72
            QVGT+ EGP EFFS R+ NKKRK+TLV+E+L  ++    + KN+Y  +Q KK SG K  YK L  KR GG+K
Sbjct:  167 QVGTIIEGPTEFFSGRIENKKRKRTLVEEVLAGEQETHRF-KNKYAQLQEKKTSGKKAFYKALKEKRKGGIK 237          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A194XJ59_9HELO (Putative rRNA-processing protein fcf2 n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194XJ59_9HELO)

HSP 1 Score: 75.9 bits (185), Expect = 4.410e-15
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGG 70
            QVGT+ EGP E+FS+RL NK RK+TLV+E+L  + T   + K +YN IQA K SG K HYK+LM  R GG
Sbjct:  151 QVGTIIEGPTEYFSARLTNKDRKRTLVEEVLAGEVTTGRF-KAKYNEIQAAKTSGKKAHYKKLMAMRKGG 219          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A6G1G1W3_9PEZI (uncharacterized protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1G1W3_9PEZI)

HSP 1 Score: 72.4 bits (176), Expect = 6.340e-15
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKRTGGLK 72
            QVGT+ EGP EFFS+RL NK+RKKTLV+E+L A+     + K +YN IQ KK SG + HY  L  KRT   K
Sbjct:   25 QVGTIIEGPTEFFSARLTNKERKKTLVEEILDAEREGGRF-KRKYNEIQEKKMSGKRGHYNALRAKRTKQFK 95          
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Match: A0A2Z6RWF8_9GLOM (Fcf2 domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RWF8_9GLOM)

HSP 1 Score: 76.6 bits (187), Expect = 8.080e-15
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQAKKKSGGKTHYKELMRKR 67
            ++GT+KEGP EF+SSR+P K+RK+T+ DELL A+E  R Y K ++  IQ  K+SGGK +YK+L  KR
Sbjct:  262 EIGTIKEGPAEFYSSRIPRKERKQTIADELL-ANEQSRRYFKRKFTEIQEIKQSGGKKYYKQLKAKR 327          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig138541.2691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ46_ECTSI4.900e-2869.33Similar to deoxynucleotidyltransferase, terminal, ... [more]
A0A397U2L9_9GLOM1.110e-1659.70Fcf2 pre-rRNA processing-domain-containing protein... [more]
A0A8H6CHT9_9LECA6.470e-1652.78Fcf2 domain-containing protein n=2 Tax=Letharia Ta... [more]
A0A3D8SSZ5_9HELO7.680e-1655.71Putative rRNA-processing protein fcf2 n=2 Tax=Cole... [more]
A0A397TD17_9GLOM1.070e-1552.24Fcf2 pre-rRNA processing-domain-containing protein... [more]
A0A8H3IB41_9LECA1.230e-1551.39Fcf2 domain-containing protein n=1 Tax=Heterodermi... [more]
M2ZTK8_PSEFD2.970e-1554.17Fcf2 domain-containing protein n=4 Tax=Pseudocerco... [more]
A0A194XJ59_9HELO4.410e-1557.14Putative rRNA-processing protein fcf2 n=1 Tax=Moll... [more]
A0A6G1G1W3_9PEZI6.340e-1555.56uncharacterized protein n=1 Tax=Eremomyces bilater... [more]
A0A2Z6RWF8_9GLOM8.080e-1555.22Fcf2 domain-containing protein n=2 Tax=Rhizophagus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014810Fcf2 pre-rRNA processing, C-terminalPFAMPF08698Fcf2coord: 1..43
e-value: 1.1E-9
score: 38.6
IPR039883Fcf2/DNTTIP2PANTHERPTHR21686UNCHARACTERIZEDcoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig138541contigH-elongata_contig138541:73..789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig138541.2691.1mRNA_H-elongata_contig138541.2691.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig138541 73..789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig138541.2691.1 ID=prot_H-elongata_contig138541.2691.1|Name=mRNA_H-elongata_contig138541.2691.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
QVGTVKEGPGEFFSSRLPNKKRKKTLVDELLVADETFRAYAKNQYNSIQA
KKKSGGKTHYKELMRKRTGGLKWKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014810Fcf2_C
IPR039883Fcf2/DNTTIP2