prot_H-elongata_contig13842.2682.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13842.2682.1
Unique Nameprot_H-elongata_contig13842.2682.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length489
Homology
BLAST of mRNA_H-elongata_contig13842.2682.1 vs. uniprot
Match: A0A6H5KCM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM1_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.760e-68
Identity = 245/573 (42.76%), Postives = 290/573 (50.61%), Query Frame = 0
Query:    4 QGQIAGLREKLKERQTDVRELRMLTGGRGQSRLRELSDMLKEARAECDVLRTRQGVLAKELAVSQKEGDTLRGDLLTSQKALADLNSYADSLKARYNAEMGKLEASLAEMERELTXXXXXXXXXXXXXXXXXXXALTDGQRYLNRTILLGGKLVKTRARESDLRSENARLFETLNSS--------GSNKQR------------FDERGTEAEAVGVDVDAAEVVALRRDNAELKLECENLRRTGADAAVPCSESEIAEESKPTRSSDSNMVSQVSMTAAKKSWARGSGLIKKASEIPFPSSSSXXXXARRA-----------SGTVSAEVPVMVAGTVPVATPVVTPDDSGVIDAVVTAKINSAGRSTAAVARFASA--------------------------------------------------------EEAERAFREVGVARVVEGLRAENARGRKRLRVAENAVEALETRAIDETARADRLEAELGRMRMAVRGRVQALKAALVEAEQNAQRATSKQEEFVAQWEEDVDALRQQVVTERTKRVGESEELEGVILGLEDELDDLKVRW 489
            QGQIAGLRE+LKER+ +V+ELR+LTGGRGQS+LREL  MLKEAR ECD LR R+  LA+ELA++QKEGD+LRGDLL +QKAL+DLN YADSL++RY  EM KLEASLAEMERELTXXXXXXXXXXXXXXXXXXX     +RY +RTILL G++VKTRARE+DLR  NA L E   S+          N  +            F ++  + E  G DV   E  +LRRDNA L+ E E L  TG   A P S         P    D+                RG G      +        XXXX RR             G V A  P + A             D+ V+DAVV   I S                                                                       + ERAFRE GV RVVEGLRAEN R R+RLR AE A E+ E RA  E  RAD LE ELGR                        RA +++E F+ QWE+DVDALR Q+  ER  R  +  +LE VI  LEDE+DDLK R+
Sbjct:   92 QGQIAGLRERLKERELEVKELRVLTGGRGQSKLRELGAMLKEARGECDALRAREKNLAEELAMAQKEGDSLRGDLLANQKALSDLNVYADSLRSRYTDEMVKLEASLAEMERELTXXXXXXXXXXXXXXXXXXXXXXXRERYRSRTILLQGEVVKTRARETDLRRANAALVEKATSALEAVEANVAKNAGKPIAPLYSVTTTDFSQQQRDEEKDGSDVGVVE--SLRRDNAALRSELEALS-TGGGVAAPVSP--------PFDGVDT----------------RGFGWGVPGGDXXXXXXXXXXXXXRRGFFLPWLLASAWEGGVVAPRPGVAA-------------DAVVVDAVVNGGIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADVKNDEERAFREAGVHRVVEGLRAENTRVRERLRSAERAAESGEDRAKVEAERADALEEELGRXXXXXXXXXXXXXXXXXXXXXXXDRAVAEKEGFMIQWEQDVDALRNQLGAERKARQEDRRDLESVIFDLEDEVDDLKERY 624          
BLAST of mRNA_H-elongata_contig13842.2682.1 vs. uniprot
Match: D8LHE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE2_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.440e-54
Identity = 123/160 (76.88%), Postives = 144/160 (90.00%), Query Frame = 0
Query:    4 QGQIAGLREKLKERQTDVRELRMLTGGRGQSRLRELSDMLKEARAECDVLRTRQGVLAKELAVSQKEGDTLRGDLLTSQKALADLNSYADSLKARYNAEMGKLEASLAEMERELTXXXXXXXXXXXXXXXXXXXALTDGQRYLNRTILLGGKLVKTRARE 163
            QGQIAGLRE+LKER+ +V+ELR+LTGGRGQS+LREL  MLKEAR ECD LRTR+ VLA+ELA++QKEGD+LRGDLL +QKAL+DLN YADSL++RY  EM KLEASLAEMERELT XXXXXXXXXXXXXXXXXXA+ D +RY +RTILL G++VKTRAR+
Sbjct:   82 QGQIAGLRERLKERELEVKELRVLTGGRGQSKLRELGAMLKEARGECDALRTREKVLAEELAMAQKEGDSLRGDLLANQKALSDLNVYADSLRSRYTDEMVKLEASLAEMERELTRXXXXXXXXXXXXXXXXXXAVADQERYRSRTILLQGEVVKTRARD 241          
BLAST of mRNA_H-elongata_contig13842.2682.1 vs. uniprot
Match: D8LHE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE1_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 9.480e-32
Identity = 85/137 (62.04%), Postives = 102/137 (74.45%), Query Frame = 0
Query:  353 ERAFREVGVARVVEGLRAENARGRKRLRVAENAVEALETRAIDETARADRLEAELGRMRMAVRGRVQALKAALVEAEQNAQRATSKQEEFVAQWEEDVDALRQQVVTERTKRVGESEELEGVILGLEDELDDLKVRW 489
            ERAFRE GV RVV+GLRAEN R R+RLR AE A E+ E RA  E  RAD LEAELGR+R  V+GRV+ALKAAL EAE++A RA +++E F+ QWEEDVDALR Q+  ER  R  +  +LE VI  LEDE+D LK R+
Sbjct:   28 ERAFREAGVNRVVQGLRAENTRLRQRLRSAERASESGEDRANVEAERADALEAELGRVRATVKGRVRALKAALEEAEEDADRAVAEKEGFMVQWEEDVDALRNQLGAERKAREEDRRDLESVIFDLEDEVDGLKERF 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13842.2682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KCM1_9PHAE2.760e-6842.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHE2_ECTSI3.440e-5476.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHE1_ECTSI9.480e-3262.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableCOILSCoilCoilcoord: 96..130
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availableCOILSCoilCoilcoord: 365..406
NoneNo IPR availableCOILSCoilCoilcoord: 411..463
NoneNo IPR availableCOILSCoilCoilcoord: 206..226
NoneNo IPR availableCOILSCoilCoilcoord: 468..488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13842contigH-elongata_contig13842:817..7472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13842.2682.1mRNA_H-elongata_contig13842.2682.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13842 817..7472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13842.2682.1 ID=prot_H-elongata_contig13842.2682.1|Name=mRNA_H-elongata_contig13842.2682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=489bp
LRTQGQIAGLREKLKERQTDVRELRMLTGGRGQSRLRELSDMLKEARAEC
DVLRTRQGVLAKELAVSQKEGDTLRGDLLTSQKALADLNSYADSLKARYN
AEMGKLEASLAEMERELTRAEAAHMRERRELLHREASALTDGQRYLNRTI
LLGGKLVKTRARESDLRSENARLFETLNSSGSNKQRFDERGTEAEAVGVD
VDAAEVVALRRDNAELKLECENLRRTGADAAVPCSESEIAEESKPTRSSD
SNMVSQVSMTAAKKSWARGSGLIKKASEIPFPSSSSSSSSARRASGTVSA
EVPVMVAGTVPVATPVVTPDDSGVIDAVVTAKINSAGRSTAAVARFASAE
EAERAFREVGVARVVEGLRAENARGRKRLRVAENAVEALETRAIDETARA
DRLEAELGRMRMAVRGRVQALKAALVEAEQNAQRATSKQEEFVAQWEEDV
DALRQQVVTERTKRVGESEELEGVILGLEDELDDLKVRW
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