mRNA_H-elongata_contig138406.2681.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig138406.2681.1
Unique NamemRNA_H-elongata_contig138406.2681.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A5K1G3Y4_9MAGN (Uncharacterized protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1G3Y4_9MAGN)

HSP 1 Score: 97.4 bits (241), Expect = 9.640e-19
Identity = 88/365 (24.11%), Postives = 157/365 (43.01%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLP-------------WCAGIIKRNLTVVKWVKNHHATSAVLLDKTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADGQLP-------------CM-------------SKFFNGMLK-MPERWDEERNAKRCKYIHSPYTAYPEYHGQDMSDIDGGQVL--LDLHTMYERLLIHHGADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVFLLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRL 969
            AH L+L +KDI   P             W   I K   T+  ++ NH    ++    ++ +L+    TRFA+ ++   R  +V+  L         + Y     A A++ +  +V D         ++W ++++F++   P++ +L   D   P             C+             S+FF+ +   + ERWD+   +  C   HS     P+Y+ +   +   G+V   LD     +R+      D   +   T  +        A C+Y+ ++ G F         ++MSP DWW +YG   +P L K+A+R  S+   S+  ERNWS+Y ++   +  ++  +RA  LV+V +NLRL
Sbjct:  198 AHTLNLALKDICNPPSEDVDPKGHELFSWIQEIEKDVRTIRNFIVNHQHALSLFSSYSDLRLLKVAETRFASIIVMLKRIQRVRDALIQMVFSRECSFYRVEDEAKAQSFKNLIVED---------KWWDKITYFLDFTEPIWCMLRAVDKDEPIYAMWENMIEEIQCIVFKKEKKDIVIDHSEFFDRISTILVERWDKSNTSLHC-IAHS---LNPKYYTKKWIEGAPGRVTPHLDDELNTQRMSC---MDRLFIDSYTRTQ--------AMCEYNKFSLGDFNSEGAAQAREDMSPFDWWASYGS-EMPVLHKLALRLLSQPVTSSCCERNWSIYGHIHNIKRNKLTSQRAEDLVYVHSNLRL 537          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: UPI001929B361 (uncharacterized protein LOC120258657 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929B361)

HSP 1 Score: 97.1 bits (240), Expect = 1.380e-18
Identity = 86/339 (25.37%), Postives = 150/339 (44.25%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNHHATSAVLLD-KTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADG-QLPCMSKFFNGMLKMPERWDEERNAKRCKYIHSPYTAYPE--YHGQDMSDIDGGQVLLDLHTMYER--LLIHHGAD-SPAVIKATSQESGGGPVARAACQYSLYNT--GKFKGHVFLLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRLQDKDLPK 990
            AH L+L++KDIAK+P    +  R   +  +V NH  T + L + K   +++ P  TRFAT  ++       KS L+          +N + T  A+ +   V         L  QFW +    V+   P+  LL   D  + P +   + GM++  +   E    K  + ++ PY +  E  +  Q   DI      L+    Y++  + + H  D     I   S  +      +   + S +    G F   +    ++N  P +WW  +G    P++ K+A+R  S+ S+S+G ERNWS +  +   R  R+  +R   LV++  NL L++++  K
Sbjct:  133 AHCLNLMLKDIAKIPHIETLAHRASLITVFVYNHKWTLSWLRNIKGWTEILLPGDTRFATTFIALKSLYDHKSDLQAMITSGDFLGWNGSKTKKAKDVCNIV---------LDNQFWNDCLVVVKIASPLVRLLRIVDSDERPSLGYIYEGMIRANKTIKE--TFKYVRRLYQPYISILEERWERQMHQDIHAAAFWLNPTFQYDKDTVQVCHSPDVMDGFITIISNPNIAPNHNKMIVESSTFRERLGSFGNTLTQSSSKNTRPDEWWRFFGH-SAPNIQKLALRILSQTSSSSGCERNWSAFERIHTKRRNRLEHQRLNDLVYIHYNLCLKNRNFNK 459          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A388K4Z0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4Z0_CHABU)

HSP 1 Score: 92.4 bits (228), Expect = 7.000e-17
Identity = 91/365 (24.93%), Postives = 148/365 (40.55%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNHHATSAVLLDKTE-YQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELL--CTADGQLPCMSKFFNGMLKMPERW----DEERNA------KRCKYIHSPYTAY----------PEYH-------------------GQDMSDIDGGQVLLDLHTMYERLLIHHGADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVFLLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRL 969
            AH   LL++DI+KL W  G +KR  T++K+++NHH+T ++++   +   L+ P   RF +  +   R +  K+VL      ++ A +     A   T + K  ADL      +  +W EL   V+ M P+Y LL     DG  P     ++ +++         DE+R +       R K +  P  A           P +                    G D    D  +VL DLH         H   +P   +   ++    P A+  C+                    ++P+ WW TYG   +PDL  +AI+     S +  +ERNW+    V   R     PE   KLV++  N++L
Sbjct:  412 AHCCSLLLRDISKLDWVTGTVKRGHTIIKFIRNHHSTHSLMMSMDDSLALLRPTEVRFGSVYMMLERLVNRKAVLSDMVDRKNAARWTGIRWA---TAKLKSKADLVYFTMRRDGWWTELKKVVDVMEPLYNLLRRMDHDGTSPTNLVEYDDLIERKLAHVVLTDEQRASVMEKARDRVKMMRHPVHALAFLMDPRRRNPRWLYDRDSATVQNAMLYLQRQVGGDWKGPDHLEVLGDLHEF-------HKEPTPNGPRRKDKKMWE-PDAKVDCE-------------------KLTPSKWWATYGG-DVPDLQAIAIKVMGMRSTATPAERNWASMDFVHSKRRNSFKPETLEKLVYIHWNMQL 745          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A6A5M7K7_LUPAL (Phosphopyruvate hydratase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5M7K7_LUPAL)

HSP 1 Score: 92.0 bits (227), Expect = 8.200e-17
Identity = 80/335 (23.88%), Postives = 146/335 (43.58%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNH-HATSAVLLDKTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADGQ-LPCMSKFFNGMLKMPERWDEERNAKRCKYIHSPYTAYPE--YHGQDMSDIDGGQVLLDLHTMYE-RLLIHHGADSPAVIKATSQESGGGP--VARAACQYSLYNTGKFK-GHVFLLYAQN-MSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRLQDK 978
            AH ++L+ +DI KLP     +     + K++ NH H    +       +++ P  TRFATN ++    L  K  L+       V     T++A ++ ++ K   +      L   FW + +  V+   P+  +L   D +  P M   +    K   R   ER  +R K    PY    +  +  Q   ++      L+    +       H   +  ++    + + G P  + +   +  +Y   +F  G    +  ++ + P  WW TYG    P+L K+A+R  S+  +++G ERNWS++ ++   +  R+  ++   LVFVR NLRLQ +
Sbjct:  423 AHCVNLMFQDIGKLPEVTDTVSHAANITKYLYNHCHPLYLMRQFTNGKEILRPAPTRFATNFIALQSILAQKDALRAL-----VTSREWTSSAYSKDVKAKKCVE----QVLDSNFWKQCADIVKITEPLVRVLRIVDSEDKPAMGFLYQAFFKA--RHKMERRFQRNKTKIKPYLEIMDSRWDLQLKRNLHAAGYWLNPQCFFNVEEFEKHKFTTSGLLDVFEKHAHGDPDLLDKLTSEMRIYKDAEFDFGRPAAIRERSKVMPDQWWETYG-CRTPNLQKLAVRVLSQTCSASGCERNWSVFEHIHTNKRNRLEHQKLNDLVFVRYNLRLQQR 745          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: UPI001244D623 (uncharacterized protein LOC115964702 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001244D623)

HSP 1 Score: 90.5 bits (223), Expect = 1.950e-16
Identity = 73/344 (21.22%), Postives = 146/344 (42.44%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNHHATSAVLLDKT-EYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADGQL-PCMSKFFNGMLKMPE------RWDEERNAKRCKYIHSPYTAY------------PEYHGQDMSDIDGGQVLLDLHTMYERLLIHHGADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVFLLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRLQ 972
            AH +DL++KDI K+P  A  ++R + +  ++ NH     ++ + T + +L+    TRF T+ L+   T K K  L+     E          A+A+ +   +         L   FW  + + ++ M P+  +L + D +  P MS  +  M +  E        ++ER +   K I   +               P+Y   D + +   ++  +L+   +RL+         +++ +  +       +A   + +  + K +           +P +WW  YG    P+L ++ I+  S   ++ G ERNWS++  +   R  R+  +R   L FV+ N +++
Sbjct:   66 AHCIDLILKDIGKIPRIAKTLERAIQLTGYIYNHGGVLKMMREYTNQRELVRTGKTRFCTSYLTIKSTFKQKHSLRAMFTSEEWVHSRWAKEANAKRVVEMI---------LMPSFWNTIVYILKVMGPLVRVLPSVDNERKPTMSYIYEAMDRAKEAIIKAFNENKERYSNIFKIIDERWECQLHPLHAVGHFLNPKYFYFDPNIVTNHEITAELYACIQRLVPSTKIQDKIMVELSMYK-------KAEGLFGIQRSRKTR-----------APTEWWSLYGS-STPNLQQLTIKILSLTCSACGCERNWSVFEQIHTKRRNRLAQKRLNDLFFVKYNQKMK 381          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A388L5J5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L5J5_CHABU)

HSP 1 Score: 90.1 bits (222), Expect = 3.880e-16
Identity = 87/345 (25.22%), Postives = 147/345 (42.61%), Query Frame = 1
Query:    4 HALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNHHATSAVLLDKTE-YQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLC------TADGQLPCMSKFFNGMLKMPERWDEERN-----AKRC-KYIHSPYTAYPEYHGQD------MSDIDGGQVLLDLHTMYERLLIHHGADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVF----LLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRL 969
            H   LL++DI+KL W  G +KR+ T+VK+++NHH T ++++   +   L+ P   RF +  +   R    +++LK       V  +     +   T + +  ADL         +W EL   VE M P+Y LL       TA   L    +    ML      +E+R       + C K +  P  A      Q       + D D   V   L  +  R+     +D+   I +  +E    P          YN  +    ++    +  +  +SP++WW T+G   +P+L  +A++     S++  +ERNWS    V   R  R+ P    KLV++  N++L
Sbjct:  262 HCCSLLLRDISKLDWMKGTVKRSHTIVKFIRNHHCTHSLMMSLDDSLLLLRPTEVRFGSVYMMMERLYDRRAILKQMVEGSLVGRWKAMRWS---TTKLQSKADLVFFTLRSEGWWPELKKVVEVMEPLYVLLRRMDKDGTAPSNLVEYDRLMERMLAEIVLTEEQRRMVLEKVRDCMKMMPQPVHALAFLLDQRRREPKWLLDRDNALVQNALRYLQRRIGGAWKSDAHVQILSDLREFHTKPTG--------YNPRRKDKKMWDGDAVANSNTISPSEWWATHGG-DVPELQAIAMKVMGMWSSATPAERNWSSMDLVHSKRRNRLNPSTLEKLVYIHWNMQL 594          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A388LAH1_CHABU (RNA-directed DNA polymerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LAH1_CHABU)

HSP 1 Score: 89.7 bits (221), Expect = 6.270e-16
Identity = 90/347 (25.94%), Postives = 142/347 (40.92%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNHHATSAVLLD-KTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELL--CTADGQLPC--------MSKFFNGMLKMPERWDE--ERNAKRCKYIHSPYTAY----------PEYHGQDMSDIDGGQVLLDLHTMYERLLIHHGADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVFLLY-AQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRL 969
            AH   LL++DI+KL W  G +KR  T+VK+++NHH T++ ++   +   L+ P   RF +      R    ++VLK      +V  +     + A+   +   ADL      +  +W EL   VE M P+Y LL     DG  P         M +    ++  PE+     E+   R K +  P  A           P++    + D D   V   L  +  ++       +   I    +E    P A     Y      K       +  A  + P++WW TYG   +P L  +AI+     S +  +ERNWS    V   R  R+ P    KLV++  N+ L
Sbjct:  115 AHCCSLLLRDISKLDWVKGTVKRGHTIVKFIRNHHTTNSFMMSLDSSLTLLQPTEVRFGSVYRMLERIHNRRAVLKDMVDSMNVGKWKAMRWSSAKLQAK---ADLVYFTLQRDAWWTELRKVVEMMEPLYLLLRRMDKDGTAPSNLVEYDRLMERMLAEVVLTPEQRSSVLEKVRDRMKMMRQPVHALAFLLDPRRRDPKW----LLDRDSALVQNALCYLQRQIGAPRKPKAHVDIMKDLREFHKRPTA-----YDPKRKDKKMWEPDAVEDADIILPSEWWATYGG-DVPKLQAIAIKVMGMWSTATPAERNWSSMDLVHSKRRNRLKPATVEKLVYIHWNMNL 448          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A2Z6NFM0_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NFM0_TRISU)

HSP 1 Score: 86.3 bits (212), Expect = 6.130e-15
Identity = 81/338 (23.96%), Postives = 143/338 (42.31%), Query Frame = 1
Query:    1 AHALDLLMKDIAKLPWCAGIIKRNLTVVKWVKNH-HATSAVLLDKTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADGQ-LPCMSKFFNGMLKMPERWDEERNAKRCKYIHSPYTAYPE--YHGQDMSDIDGGQVLLDLHTMYERLLIHHGADSPA---VIKATSQESGGGPVARAACQYSLYNT-GKFKGHVFLLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRLQDKDLPK 990
            AH ++L+++D+ KL      +     + K++ NH  A   +   K   ++     TRFATN ++    L  K  L+     +     + +  A A+    +V         L  +FW E +  V+   P+  +L   D +  P M   +  + K  E  + E+  KR K    PY    +  ++ Q   ++      L+    +     +H   +     VI+  + +S        A   S  N  G F     +     + P  WW  YG    P+L K+AI   S+  +++G ERNWS++ ++   +  R+  ++   LVFVR NLRLQ+++  K
Sbjct:  258 AHCINLMLQDMGKLEEAREAVSHASKITKFIYNHCFALYLMRQHKGGREIFRLAPTRFATNFIALQSILNQKDALRTMVTSKEWTTTHYSKDAKAKQFVEQV---------LDSKFWSECADIVKITKPLVRVLRIVDSEDKPAMGYLYRAIYKARE--EIEKRFKRNKLKVEPYLKILDNRWYAQLRKNLHATGYWLNPSCRFSPEYENHETTTSGLLDVIEKYAYDSRDLRTKLTAEMRSFRNCEGSFGRKTAIEDRTEVLPDQWWEMYGTEA-PNLKKLAIWILSQTCSASGCERNWSVFEHIQSKKRNRLEHQKLNDLVFVRYNLRLQNRNKKK 583          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: A0A2K3LIK7_TRIPR (Uncharacterized protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LIK7_TRIPR)

HSP 1 Score: 84.7 bits (208), Expect = 2.040e-14
Identity = 80/361 (22.16%), Postives = 147/361 (40.72%), Query Frame = 1
Query:    4 HALDLLMKDIA-------------KLPWCAGIIKRNLTVVKWVKNHHATSAVLLDKTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADGQLPCMSKFFNGMLKMPERWDEERN-AKRCKYIHS--PYTAYPEYHG------QDMSDIDGGQVLLDLHTMYERLLIHHGADS-PAVI-----KATSQESGG---------GPVARAACQYSLYNT--GKFKGHVFLLYAQNMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRL 969
            H L+L +K+I              +  W   + +   T+ K++  H    A+       +L++   TRFA+ ++   R   VK  L     +E  + Y       A  ++ K++ D         +FW ++ + ++   P+YE+L + D   P +   +       ++WD   +  K   Y H     T Y  ++        D        +    H++  R       D  PA +         QE                 A  ++  +++  G+F     LL   N++P +WWVTYG   +P L  +A++  S+ ++S+ +ERNWS Y  +   +  ++ P+RA  LV++  NLRL
Sbjct:  222 HTLNLALKNICSPSPGPNNEVAYDECVWITKVYEDASTIKKFILTHSMRFAMYKQFVHLRLLSICDTRFASVIVMLKRMQAVKQGLLSMVINEQWSQYREDNVQKAAAVKDKILDD---------EFWAQVEYILKFTEPIYEMLRSCDTDEPNLHLVY-------DKWDSMIDRVKSIIYQHEGKELTQYSSFYDVVYNILTDRWSKSNTPLHCLAHSLNPRYYCREWLDQYPARVAPHRDNEICQERNKCFKNYFQDVSERREAIAEFVKFSSAEGEFGQFDSLLDRWNLTPKEWWVTYGS-SIPKLQSIALKLFSQPTSSSSAERNWSTYGFIQSMKRNKLNPKRAEDLVYIHTNLRL 565          
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Match: UPI0019D63C75 (uncharacterized protein LOC120652318 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D63C75)

HSP 1 Score: 84.0 bits (206), Expect = 3.980e-14
Identity = 86/370 (23.24%), Postives = 152/370 (41.08%), Query Frame = 1
Query:    4 HALDLLMKDI--AKLP-------------WCAGIIKRNLTVVKWVKNHHATSAVLLDKTEYQLINPNATRFATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQGDSLQGQFWFELSFFVEKMIPVYELLCTADGQLPCMSKFFNGMLKMPE------------------------------RWDEERNAKRCKYIHSPYTAYPEYHGQDMSDIDGGQVL-LDLHTMYERLLIHHGADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVF-LLYAQ-NMSPADWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*NVMGGRHARMGPERARKLVFVRANLRL 969
            H L+L +K+I  AK+P             W   I +  + +  ++ NH    ++  + ++ +L+    TRFA+ ++   R L VK  L+     +    Y    +  AR +R K++ +         Q+W  +S+ V+   P+YE+LC AD   PC+   +     M E                              RW +      C   HS    Y  YH   +++  G +    DL     R+              T        + +   +YS + T   + + F  +Y +  + P  WW+ +G+  +P L K+A++  ++ ++S+  ERNWS Y  +   +  ++ PERA  LVF  +NLRL
Sbjct:  309 HTLNLALKNICAAKVPRNDEESVVFDELNWIQLIAQDAIMIKNYIMNHGMRLSMFNEFSKLKLLAVAETRFASVVVMLKRFLMVKRALQTMVISDAWESYRDDNSGLARHVREKILCN---------QWWENVSYIVDFTEPIYEMLCLADTDKPCLHLVYEMWDTMIENVKKVIYNKEKXXXXXXXXFFTVVYDILISRWTKSNTPLHC-LAHSLNPRY--YHENWLNERAGRKPPHKDLEISQMRMKCFK-----KFFPITED------LNQVKVEYSKFATSSEELNDFDAIYDRWVLDPVKWWINHGQ-SVPLLQKIALKLLNQPASSSCCERNWSTYSFMHSMKRNKLTPERAEDLVFEHSNLRL 654          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig138406.2681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5K1G3Y4_9MAGN9.640e-1924.11Uncharacterized protein (Fragment) n=1 Tax=Nymphae... [more]
UPI001929B3611.380e-1825.37uncharacterized protein LOC120258657 n=1 Tax=Diosc... [more]
A0A388K4Z0_CHABU7.000e-1724.93Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A6A5M7K7_LUPAL8.200e-1723.88Phosphopyruvate hydratase n=1 Tax=Lupinus albus Ta... [more]
UPI001244D6231.950e-1621.22uncharacterized protein LOC115964702 n=1 Tax=Querc... [more]
A0A388L5J5_CHABU3.880e-1625.22Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A388LAH1_CHABU6.270e-1625.94RNA-directed DNA polymerase n=1 Tax=Chara braunii ... [more]
A0A2Z6NFM0_TRISU6.130e-1523.96Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A2K3LIK7_TRIPR2.040e-1422.16Uncharacterized protein n=1 Tax=Trifolium pratense... [more]
UPI0019D63C753.980e-1423.24uncharacterized protein LOC120652318 n=1 Tax=Panic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig138406contigH-elongata_contig138406:1..1310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score85.5
Seed ortholog evalue4.4e-14
Seed eggNOG ortholog3760.EMJ08989
EggNOG free text desc.source UniProtKB
EggNOG OGs2C7QK@1,2QUNQ@2759,37QB2@33090,3GCE5@35493,4JRQZ@91835
COG Functional cat.S
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size996
Cds size867
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig138406.2681.1prot_H-elongata_contig138406.2681.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig138406 22..1202 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929820.9233084-UTR-H-elongata_contig138406:0..211622929820.9233084-UTR-H-elongata_contig138406:0..21Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig138406 1..21 +
1691679170.6419094-UTR-H-elongata_contig138406:0..211691679170.6419094-UTR-H-elongata_contig138406:0..21Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig138406 1..21 +
1622929820.991867-UTR-H-elongata_contig138406:1202..13101622929820.991867-UTR-H-elongata_contig138406:1202..1310Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig138406 1203..1310 +
1691679170.681642-UTR-H-elongata_contig138406:1202..13101691679170.681642-UTR-H-elongata_contig138406:1202..1310Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig138406 1203..1310 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929820.939721-CDS-H-elongata_contig138406:21..2071622929820.939721-CDS-H-elongata_contig138406:21..207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig138406 22..207 +
1691679170.6533024-CDS-H-elongata_contig138406:21..2071691679170.6533024-CDS-H-elongata_contig138406:21..207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig138406 22..207 +
1622929820.9623618-CDS-H-elongata_contig138406:431..7011622929820.9623618-CDS-H-elongata_contig138406:431..701Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig138406 432..701 +
1691679170.662088-CDS-H-elongata_contig138406:431..7011691679170.662088-CDS-H-elongata_contig138406:431..701Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig138406 432..701 +
1622929820.9754114-CDS-H-elongata_contig138406:791..12021622929820.9754114-CDS-H-elongata_contig138406:791..1202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig138406 792..1202 +
1691679170.6738176-CDS-H-elongata_contig138406:791..12021691679170.6738176-CDS-H-elongata_contig138406:791..1202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig138406 792..1202 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig138406.2681.1

>prot_H-elongata_contig138406.2681.1 ID=prot_H-elongata_contig138406.2681.1|Name=mRNA_H-elongata_contig138406.2681.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=289bp
MKDIAKLPWCAGIIKRNLTVVKWVKNHHATSAVLLDKTEYQLINPNATRF
ATNLLSCIRTLKVKSVLKLFAADEHVADYNRTATADARTIRRKVVADLDQ
GDSLQGQFWFELSFFVEKMIPVYELLCTADGQLPCMSKFFNGMLKMPERW
DEERNAKRCKYIHSPYTAYPEYHGQDMSDIDGGQVLLDLHTMYERLLIHH
GADSPAVIKATSQESGGGPVARAACQYSLYNTGKFKGHVFLLYAQNMSPA
DWWVTYGKLGLPDLAKVAIRNTSKVSASAGSERNWSLY*
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mRNA from alignment at H-elongata_contig138406:1..1310+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig138406.2681.1 ID=mRNA_H-elongata_contig138406.2681.1|Name=mRNA_H-elongata_contig138406.2681.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1310bp|location=Sequence derived from alignment at H-elongata_contig138406:1..1310+ (Himanthalia elongata Himel1 dioecious)
GCGCATGCGTTAGACCTGCTCATGAAGGACATCGCCAAGCTGCCGTGGTG CGCCGGCATCATCAAGCGCAACCTCACAGTTGTGAAGTGGGTCAAGAACC ATCACGCCACGAGCGCGGTCCTACTCGACAAAACAGAGTACCAACTCATC AACCCCAACGCAACCAGATTCGCCACCAACCTGCTCTCCTGCATACGCAC GCTCAAGGTAATATGCTGTCGTGTGATGTTGTGGCGTCTTGTGTGTTTCT CTCGTCGAGGTGACAAAAATAAATACATAAATAAAACATTGCAGTTCATG TGTTTGATCGTTTTAAGTTTGAGTTGCGCCCTAGCGTTTTGCTTTTGGTT TCGCTCCGCCCCCTCTGTTCCTTGTTTCTTTTTTGTTATTGCCCCCATTG TTGTTTGTGCTTGATCAACTACAACCTCCAGGTAAAATCGGTGCTCAAGC TCTTCGCCGCTGATGAGCATGTCGCAGATTACAACAGGACTGCGACGGCG GACGCCCGCACGATCAGACGAAAAGTAGTGGCCGATCTCGACCAAGGGGA TTCTCTGCAGGGACAGTTCTGGTTTGAGCTGTCGTTCTTCGTTGAGAAAA TGATCCCGGTGTACGAGCTCCTTTGCACGGCCGACGGCCAGTTGCCGTGC ATGTCGAAATTTTTCAACGGCATGCTGAAGATGCCGGAGAGGTGGGACGA GGTTTGCGAGGAACAGGCCACGGCATCAAACGACCTGGGCGGGGAAGGGT GGAAAGACGAGATCGTATTGGAACGGCTGGGAGGTATGAAGGAGCGCAAC GCAAAGCGTTGCAAGTACATCCACTCTCCCTACACTGCCTACCCCGAGTA CCACGGCCAGGACATGTCCGACATCGATGGAGGGCAGGTCCTGCTGGACT TGCACACCATGTACGAGCGGCTCCTGATCCACCATGGCGCCGACTCCCCG GCAGTCATCAAAGCCACAAGCCAAGAGTCAGGCGGGGGACCGGTGGCGAG GGCAGCATGCCAGTATAGTCTCTACAATACCGGCAAGTTTAAGGGCCACG TGTTCTTGCTGTACGCCCAGAACATGTCCCCCGCAGACTGGTGGGTAACG TACGGAAAGCTCGGCCTGCCGGACTTGGCCAAAGTAGCCATTCGTAATAC TTCAAAGGTATCTGCATCGGCAGGATCGGAGCGTAATTGGAGTCTGTACT GAAATGTCATGGGCGGAAGGCACGCACGGATGGGCCCCGAGCGTGCCAGG AAGTTGGTGTTCGTGAGGGCTAACCTGAGGCTGCAGGATAAAGACTTACC CAAGCGGTTG
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Coding sequence (CDS) from alignment at H-elongata_contig138406:1..1310+

>mRNA_H-elongata_contig138406.2681.1 ID=mRNA_H-elongata_contig138406.2681.1|Name=mRNA_H-elongata_contig138406.2681.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1734bp|location=Sequence derived from alignment at H-elongata_contig138406:1..1310+ (Himanthalia elongata Himel1 dioecious)
ATGAAGGACATCGCCAAGCTGCCGTGGTGCGCCGGCATCATCAAGCGCAA
CCTCACAGTTGTGAAGTGGGTCAAGAACCATCACGCCACGAGCGCGGTCC
TACTCGACAAAACAGAGTACCAACTCATCAACCCCAACGCAACCAGATTC
GCCACCAACCTGCTCTCCTGCATACGCACGCTCAAGATGAAGGACATCGC
CAAGCTGCCGTGGTGCGCCGGCATCATCAAGCGCAACCTCACAGTTGTGA
AGTGGGTCAAGAACCATCACGCCACGAGCGCGGTCCTACTCGACAAAACA
GAGTACCAACTCATCAACCCCAACGCAACCAGATTCGCCACCAACCTGCT
CTCCTGCATACGCACGCTCAAGGTAAAATCGGTGCTCAAGCTCTTCGCCG
CTGATGAGCATGTCGCAGATTACAACAGGACTGCGACGGCGGACGCCCGC
ACGATCAGACGAAAAGTAGTGGCCGATCTCGACCAAGGGGATTCTCTGCA
GGGACAGTTCTGGTTTGAGCTGTCGTTCTTCGTTGAGAAAATGATCCCGG
TGTACGAGCTCCTTTGCACGGCCGACGGCCAGTTGCCGTGCATGTCGAAA
TTTTTCAACGGCATGCTGAAGATGCCGGAGAGGTGGGACGAGGTAAAATC
GGTGCTCAAGCTCTTCGCCGCTGATGAGCATGTCGCAGATTACAACAGGA
CTGCGACGGCGGACGCCCGCACGATCAGACGAAAAGTAGTGGCCGATCTC
GACCAAGGGGATTCTCTGCAGGGACAGTTCTGGTTTGAGCTGTCGTTCTT
CGTTGAGAAAATGATCCCGGTGTACGAGCTCCTTTGCACGGCCGACGGCC
AGTTGCCGTGCATGTCGAAATTTTTCAACGGCATGCTGAAGATGCCGGAG
AGGTGGGACGAGGAGCGCAACGCAAAGCGTTGCAAGTACATCCACTCTCC
CTACACTGCCTACCCCGAGTACCACGGCCAGGACATGTCCGACATCGATG
GAGGGCAGGTCCTGCTGGACTTGCACACCATGTACGAGCGGCTCCTGATC
CACCATGGCGCCGACTCCCCGGCAGTCATCAAAGCCACAAGCCAAGAGTC
AGGCGGGGGACCGGTGGCGAGGGCAGCATGCCAGTATAGTCTCTACAATA
CCGGCAAGTTTAAGGGCCACGTGTTCTTGCTGTACGCCCAGAACATGTCC
CCCGCAGACTGGTGGGTAACGTACGGAAAGCTCGGCCTGCCGGACTTGGC
CAAAGTAGCCATTCGTAATACTTCAAAGGTATCTGCATCGGCAGGATCGG
AGCGTAATTGGAGTCTGTACTGAGAGCGCAACGCAAAGCGTTGCAAGTAC
ATCCACTCTCCCTACACTGCCTACCCCGAGTACCACGGCCAGGACATGTC
CGACATCGATGGAGGGCAGGTCCTGCTGGACTTGCACACCATGTACGAGC
GGCTCCTGATCCACCATGGCGCCGACTCCCCGGCAGTCATCAAAGCCACA
AGCCAAGAGTCAGGCGGGGGACCGGTGGCGAGGGCAGCATGCCAGTATAG
TCTCTACAATACCGGCAAGTTTAAGGGCCACGTGTTCTTGCTGTACGCCC
AGAACATGTCCCCCGCAGACTGGTGGGTAACGTACGGAAAGCTCGGCCTG
CCGGACTTGGCCAAAGTAGCCATTCGTAATACTTCAAAGGTATCTGCATC
GGCAGGATCGGAGCGTAATTGGAGTCTGTACTGA
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