mRNA_H-elongata_contig13827.2678.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13827.2678.1
Unique NamemRNA_H-elongata_contig13827.2678.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 4.330e-78
Identity = 132/203 (65.02%), Postives = 159/203 (78.33%), Query Frame = 1
Query:  874 MGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            MGR VVFWN YTM VLA+   +GHA   V+HC++D+ S RVIT+S DK V CWDS TFRC+Q+              FKD R H P+DTITAALWD +R SLV+AG+ LGVWKNKGAIQ+S  SHEA VTAALYN +++Q+VSGD MGN+HVWLVETG +AFR+G+AHG+SKISCM FD S+RRL+TGANDG VKLWNF++GK
Sbjct:    1 MGRAVVFWNSYTMHVLAR--RDGHAAT-VRHCLVDDRSDRVITISADKAVRCWDSATFRCIQS--------------FKDHRMHRPDDTITAALWDHSRSSLVVAGSRLGVWKNKGAIQSSKHSHEAPVTAALYNWHFHQIVSGDAMGNVHVWLVETGLLAFRFGKAHGTSKISCMAFDASERRLLTGANDGTVKLWNFNSGK 186          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 1.510e-74
Identity = 140/289 (48.44%), Postives = 170/289 (58.82%), Query Frame = 1
Query:  616 IISGPQDPREAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            + +G QD REAA+L+GN+S  +H+GAI  V YV D+NA VTCG+DGK+HFFD+ KRR  RTF GH +  VF+F Y  RHRF  SAGMGR VVFWN YTM VLA+   +GHA N V+HC++D+ S RVIT+S DK V CWDS TFRC+Q                                                                              +VSGD MGN+HVWLVETG +AFR+G+AHG+SKISCM FD S+RRL+TGANDG VKLWNF+NGK
Sbjct:   50 LHAGLQDTREAADLHGNYSLPLHSGAISCVGYVADLNATVTCGVDGKIHFFDLTKRRTTRTFMGHVDRPVFAFAYSKRHRFVVSAGMGRAVVFWNSYTMHVLAR--RDGHAAN-VRHCLVDDRSDRVITISADKAVRCWDSATFRCIQ------------------------------------------------------------------------------IVSGDAMGNVHVWLVETGLLAFRFGKAHGTSKISCMAFDASERRLLTGANDGTVKLWNFNNGK 257          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A6H5L354_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L354_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.130e-65
Identity = 116/182 (63.74%), Postives = 133/182 (73.08%), Query Frame = 1
Query:    1 LDEGNRNMARAAHMVDLRPLPTGTTPDP-RHWGKSSNHRGMIEKARSLVINVERTSISAYVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQVSA 543
            LDEGNRNMA AAHMVDL+PLP         H G+   HR MIEK    VINVER  ISAY+TCGRDG IKFW+K TFAH R+I HLDT+KA Y  ++ G K    +G  R V  +   +AV S+K AWV DIQQ MPLSNRIA AC DRTVSFY++LTGEFVCRI GLRSSPTCVDC+++SA
Sbjct:   69 LDEGNRNMAAAAHMVDLKPLPRNQRAGADEHAGQ---HRDMIEK----VINVERPGISAYLTCGRDGAIKFWNKGTFAHYRTIRHLDTMKAAYEIIITGGKGREVDGNGRRVCSAEVNRAVKSMKSAWVYDIQQ-MPLSNRIAAACFDRTVSFYDVLTGEFVCRIGGLRSSPTCVDCVEISA 242          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A0G4J6Z8_PLABS (EF-hand domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6Z8_PLABS)

HSP 1 Score: 192 bits (489), Expect = 1.340e-49
Identity = 144/529 (27.22%), Postives = 220/529 (41.59%), Query Frame = 1
Query:    1 LDEGNRNMARAAHMVDLRPLPTGTTPDPRHWGKSSNHRGMIEKARSLVINVERTSISAYVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAG--------------------------LRSSPTCVDCLQVSAIKQQVIFGDLDGRLHVWAFGKNFYIISGP-----QDPREAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQ---LRTFDGHDNHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHG-SSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            L E   N        +L P P     D  H      HR MIE     V+ + +T    YVT  RDGT K W+     H+R++          +S ++G                          C         +P SNR+A+   D    FY+  + E V R                             L + P CV  +  S  +  +  GD  G + + AF + ++   G       D  +   +       +H   +  + ++ +++A VT  LD  V F D+ +  Q    + F GH    V+SF +C  ++F  S G  R +  W+P+    +    G   A   V   +++E+ +++I+++ DKT+  WD   FRC+Q                 D   + PE+ I+   W K    L+ A N L VW +K   QA T SH+ S+  A+YN  + QVVSGD    + VW +ETG   F Y   H  +S I+ M  D S RRL+TG +DG VK+WNFS+G+
Sbjct:   89 LMENQANEFNDTSFDELVPSPVPEPADNAHH----YHRDMIE----TVLYIPKTD--KYVTSSRDGTFKVWNCKDRLHVRTVR-------CGNSWIIG-------------------------SCL--------LPRSNRLAMVSADLRAHFYDATSIELVSRFNDDPVTRNNGLTFAELRRQQQPQRLQTMLENMPVCVTGIP-SPTEDIMAIGDTMGTITIHAFDEKWHACDGAIAECSHDSPKCIGVRREAFPGVHTDWVTDIKWIPELDALVTSSLDRTVKFLDVERHGQDPVRKKFTGHRK-GVYSFDFCAGYKFMVSCGSSRRITAWDPFRCREINSLSGHMAAVQQV---VVNEDKNQIISLAVDKTIKVWDVRNFRCMQT--------------ITDANHYRPENRISRLTWVKAHSCLLAATNRLDVWPSKAVSQAETLSHDHSICTAIYNSNFGQVVSGDVGSQVKVWDLETGRSVFSYRNVHRRASSITAMALDASMRRLITGGDDGSVKVWNFSSGQ 548          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A812VAD4_9DINO (Wdr64 protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VAD4_9DINO)

HSP 1 Score: 192 bits (488), Expect = 2.540e-49
Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query:  175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            Y+T GRDG +K WH +   H      +D  + +         SW +                    C W       M  S ++AVA     + FY+      V  I     +P C+         S+ K+ ++ GD  G + V+    N+++    Q+P+   + + +  ++        H   +  V +V+ + A VTC LDG+++  D+   ++    D    H   V S+ +C  ++FFAS G  R ++ WNPYT   +   +G      +V   +++E+  ++I++S DK V  WD   ++C+Q               F D   + PED +T   +D+   +LVL  + + V      +Q S R+H A +  ALYN  ++Q++SGD  G + VW ++TG++ F + +AH   K++CM FD S+R L TG  DG VKLWNFS+G+
Sbjct:  166 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 553          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A7S1A9E2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9E2_NOCSC)

HSP 1 Score: 192 bits (488), Expect = 2.580e-49
Identity = 138/451 (30.60%), Postives = 216/451 (47.89%), Query Frame = 1
Query:  175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEM-LTGEFVCRIAGLRSSPTCV---DCLQVSAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSD-----QIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHD------NHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            YVT GRDG +K W+ +   H RSI+           +  G KSW                 ++S  C W       M  S R+A+A     + FY+       +  I     +P C+   +  + +A  + ++ GD  G + V+   +++           +AE    F+      Q H   +  V +V+++ A VTCGLDG ++  D+   R   T DG           V ++ +C  ++FFAS G+ R VV WNPYT   +   +G   +  ++   ++ E  S++I++S DK V  WD   +RC+Q               F D   + PED +T   +D+   +L+L  +++ V      ++ S R+H A +  ALYN  + QVVSGD +G I VW V TG++ F + +  G  K++CM FD S+RRL TGA DG VKLWNFS+G+
Sbjct:  181 YVTAGRDGVVKVWNPNLQLH-RSID-----------VAGGHKSW-----------------LSS--CCW-------MNKSRRLAIASSRFKIYFYDSSFNNTALGHIEHKEGTPLCLGYHESNESNAQNEMLMVGDTSGCVTVYPLTEDW--------TEHSAETPIAFNPKPLRRQYHTDWVTKVGFVSELQAMVTCGLDGDINCCDVHANR---TKDGRGPIPRLHKKGVHTWCWCKSYKFFASGGLDRQVVIWNPYTQKPMNHLQGHNASILDI---LMHENQSQLISLSVDKVVKVWDIRNYRCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALILCSSSMNVLPVNVHVETS-RTHMAPIVGALYNDVFKQVVSGDHLGTICVWDVRTGKMDFEF-RVQGDHKVTCMAFDESKRRLFTGAEDGVVKLWNFSSGQ 563          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A812U6I5_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U6I5_SYMMI)

HSP 1 Score: 192 bits (488), Expect = 3.080e-49
Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query:  175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            Y+T GRDG +K WH +   H      +D  + +         SW +                    C W       M  S ++AVA     + FY+      V  I     +P C+         S+ K+ ++ GD  G + V+    N+++    Q+P+   + + +  ++        H   +  V +V+ + A VTC LDG+++  D+   ++    D    H   V S+ +C  ++FFAS G  R ++ WNPYT   +   +G      +V   +++E+  ++I++S DK V  WD   ++C+Q               F D   + PED +T   +D+   +LVL  + + V      +Q S R+H A +  ALYN  ++Q++SGD  G + VW ++TG++ F + +AH   K++CM FD S+R L TG  DG VKLWNFS+G+
Sbjct:  479 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 866          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A813C677_9DINO (Atg6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C677_9DINO)

HSP 1 Score: 192 bits (488), Expect = 3.470e-49
Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query:  175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            Y+T GRDG +K WH +   H      +D  + +         SW +                    C W       M  S ++AVA     + FY+      V  I     +P C+         S+ K+ ++ GD  G + V+    N+++    Q+P+   + + +  ++        H   +  V +V+ + A VTC LDG+++  D+   ++    D    H   V S+ +C  ++FFAS G  R ++ WNPYT   +   +G      +V   +++E+  ++I++S DK V  WD   ++C+Q               F D   + PED +T   +D+   +LVL  + + V      +Q S R+H A +  ALYN  ++Q++SGD  G + VW ++TG++ F + +AH   K++CM FD S+R L TG  DG VKLWNFS+G+
Sbjct: 1043 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 1430          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A1Q9E9P6_SYMMI (WD repeat-containing protein 64 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E9P6_SYMMI)

HSP 1 Score: 192 bits (488), Expect = 3.700e-49
Identity = 126/449 (28.06%), Postives = 211/449 (46.99%), Query Frame = 1
Query:  175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDPREAAELNGNFSDQ-------IHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            Y+T GRDG +K WH +   H      +D  + +         SW +                    C W       M  S ++AVA     + FY+      V  I     +P C+         S+ K+ ++ GD  G + V+    N+++    Q+P+   + + +  ++        H   +  V +V+ + A VTC LDG+++  D+   ++    D    H   V S+ +C  ++FFAS G  R ++ WNPYT   +   +G      +V   +++E+  ++I++S DK V  WD   ++C+Q               F D   + PED +T   +D+   +LVL  + + V      +Q S R+H A +  ALYN  ++Q++SGD  G + VW ++TG++ F + +AH   K++CM FD S+R L TG  DG VKLWNFS+G+
Sbjct: 1666 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSALSP-VSHIDHKDGTPLCLGYTDFHENKSSEKEILMVGDDKGYVSVYPLDANYWL---EQEPKSEGKPDSDGKNKRRRSRTKYHTDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCANYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQIISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPISVKVQTS-RTHLAPIVGALYNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDESKRCLYTGGEDGCVKLWNFSSGQ 2053          
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Match: A0A812RAY7_9DINO (Wdr64 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RAY7_9DINO)

HSP 1 Score: 186 bits (473), Expect = 2.560e-48
Identity = 123/446 (27.58%), Postives = 207/446 (46.41%), Query Frame = 1
Query:  175 YVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGGKRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLTGEFVCRIAGLRSSPTCVDCLQV----SAIKQQVIFGDLDGRLHVWAFGKNFYIISGPQDP----REAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFDIVKRRQLRTFDGHDNH--AVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVLAKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRRARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKGAIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQAHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK 1482
            Y+T GRDG +K WH +   H      +D  + +         SW +                    C W       M  S ++AVA     + FY+      +  I     +P C+         S+ K+ ++ GD  G + V+    N ++   P+       +  ++      + H   +  V +V+ + A VTC LDG+++  D+   ++    D    H   V S+ +CT ++FFAS G  R ++ WNPYT   +   +G      +V   +++E+  ++I++S DK V  WD   ++C+Q               F D   + PED +T   +D+   +LVL  + + V      +Q S R+H A +  AL+N  ++Q++SGD  G + VW ++TG++ F + +AH   K++CM FD  +R L TG  DG VKLWNFS+G+
Sbjct:  166 YITAGRDGFVKVWHPNLTLH----KEIDVGQTS---------SWLSA-------------------CCW-------MQKSRKLAVASSSFRIFFYDSSLSP-ITHIDHKDGTPLCLGYTDSHENKSSEKEILMVGDDKGYVSVYPLDANDWLDQEPKSEGKPDSDGLKVKKMSRTKYHKDWVTKVGFVSQLQAMVTCSLDGEINICDVHTNQRKEGRDAVRLHKKGVHSWCWCTNYKFFASGGSDRQIIIWNPYTQKAMNYLQGHNAPVLDV---LVNEKQHQLISMSVDKVVKVWDILNYQCIQT--------------FTDKTEYKPEDRLTCMAFDEEGPALVLCSSLINVLPVSVKVQTS-RTHLAPIVGALHNDVFHQIISGDNTGTVSVWDIKTGKLEFEFRRAHQDHKMTCMAFDEPKRCLYTGGEDGCVKLWNFSSGQ 553          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13827.2678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB52_9PHAE4.330e-7865.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP1_ECTSI1.510e-7448.44Similar to WD repeat domain 49 n=1 Tax=Ectocarpus ... [more]
A0A6H5L354_9PHAE1.130e-6563.74EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0G4J6Z8_PLABS1.340e-4927.22EF-hand domain-containing protein n=1 Tax=Plasmodi... [more]
A0A812VAD4_9DINO2.540e-4928.06Wdr64 protein n=2 Tax=unclassified Symbiodinium Ta... [more]
A0A7S1A9E2_NOCSC2.580e-4930.60Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A812U6I5_SYMMI3.080e-4928.06Calmodulin n=1 Tax=Symbiodinium microadriaticum Ta... [more]
A0A813C677_9DINO3.470e-4928.06Atg6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13827contigH-elongata_contig13827:2025..7500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score262.3
Seed ortholog evalue4.5e-67
Seed eggNOG ortholog2880.D7FNP1
Preferred nameWDR64
EggNOG free text desc.SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
EggNOG OGsKOG0274@1,KOG0274@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons10
Model size1482
Cds size1461
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929820.5834844-UTR-H-elongata_contig13827:2024..20451622929820.5834844-UTR-H-elongata_contig13827:2024..2045Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13827 2025..2045 +
1691679170.479879-UTR-H-elongata_contig13827:2024..20451691679170.479879-UTR-H-elongata_contig13827:2024..2045Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13827 2025..2045 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929820.5964022-CDS-H-elongata_contig13827:2045..21651622929820.5964022-CDS-H-elongata_contig13827:2045..2165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 2046..2165 +
1691679170.4896607-CDS-H-elongata_contig13827:2045..21651691679170.4896607-CDS-H-elongata_contig13827:2045..2165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 2046..2165 +
1622929820.612253-CDS-H-elongata_contig13827:2459..26091622929820.612253-CDS-H-elongata_contig13827:2459..2609Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 2460..2609 +
1691679170.5024571-CDS-H-elongata_contig13827:2459..26091691679170.5024571-CDS-H-elongata_contig13827:2459..2609Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 2460..2609 +
1622929820.6227107-CDS-H-elongata_contig13827:4064..41721622929820.6227107-CDS-H-elongata_contig13827:4064..4172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 4065..4172 +
1691679170.5171373-CDS-H-elongata_contig13827:4064..41721691679170.5171373-CDS-H-elongata_contig13827:4064..4172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 4065..4172 +
1622929820.635977-CDS-H-elongata_contig13827:4379..45141622929820.635977-CDS-H-elongata_contig13827:4379..4514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 4380..4514 +
1691679170.5305183-CDS-H-elongata_contig13827:4379..45141691679170.5305183-CDS-H-elongata_contig13827:4379..4514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 4380..4514 +
1622929820.6628182-CDS-H-elongata_contig13827:4786..48771622929820.6628182-CDS-H-elongata_contig13827:4786..4877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 4787..4877 +
1691679170.5408316-CDS-H-elongata_contig13827:4786..48771691679170.5408316-CDS-H-elongata_contig13827:4786..4877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 4787..4877 +
1622929820.691635-CDS-H-elongata_contig13827:5411..56341622929820.691635-CDS-H-elongata_contig13827:5411..5634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 5412..5634 +
1691679170.551479-CDS-H-elongata_contig13827:5411..56341691679170.551479-CDS-H-elongata_contig13827:5411..5634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 5412..5634 +
1622929820.7210028-CDS-H-elongata_contig13827:6059..63121622929820.7210028-CDS-H-elongata_contig13827:6059..6312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 6060..6312 +
1691679170.560675-CDS-H-elongata_contig13827:6059..63121691679170.560675-CDS-H-elongata_contig13827:6059..6312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 6060..6312 +
1622929820.734757-CDS-H-elongata_contig13827:6622..68141622929820.734757-CDS-H-elongata_contig13827:6622..6814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 6623..6814 +
1691679170.56866-CDS-H-elongata_contig13827:6622..68141691679170.56866-CDS-H-elongata_contig13827:6622..6814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 6623..6814 +
1622929820.7508016-CDS-H-elongata_contig13827:7118..71861622929820.7508016-CDS-H-elongata_contig13827:7118..7186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 7119..7186 +
1691679170.5769525-CDS-H-elongata_contig13827:7118..71861691679170.5769525-CDS-H-elongata_contig13827:7118..7186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 7119..7186 +
1622929820.7669017-CDS-H-elongata_contig13827:7379..75001622929820.7669017-CDS-H-elongata_contig13827:7379..7500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 7380..7500 +
1691679170.5859888-CDS-H-elongata_contig13827:7379..75001691679170.5859888-CDS-H-elongata_contig13827:7379..7500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13827 7380..7500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13827.2678.1prot_H-elongata_contig13827.2678.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13827 2046..7500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13827.2678.1

>prot_H-elongata_contig13827.2678.1 ID=prot_H-elongata_contig13827.2678.1|Name=mRNA_H-elongata_contig13827.2678.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=487bp
MARAAHMVDLRPLPTGTTPDPRHWGKSSNHRGMIEKARSLVINVERTSIS
AYVTCGRDGTIKFWHKDTFAHIRSINHLDTIKATYSSLVLGRKSWGAEGG
KRGVFPSPARKAVNSIKCAWVCDIQQQMPLSNRIAVACLDRTVSFYEMLT
GEFVCRIAGLRSSPTCVDCLQVSAIKQQVIFGDLDGRLHVWAFGKNFYII
SGPQDPREAAELNGNFSDQIHAGAICHVAYVNDINAAVTCGLDGKVHFFD
IVKRRQLRTFDGHDNHAVFSFVYCTRHRFFASAGMGRGVVFWNPYTMCVL
AKGEGEGHATNNVKHCMIDEESSRVITVSTDKTVCCWDSTTFRCLQARRR
ARREKGGRKPIFKDGRSHHPEDTITAALWDKNRRSLVLAGNTLGVWKNKG
AIQASTRSHEASVTAALYNKYYNQVVSGDTMGNIHVWLVETGEVAFRYGQ
AHGSSKISCMCFDTSQRRLVTGANDGGVKLWNFSNGK
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mRNA from alignment at H-elongata_contig13827:2025..7500+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13827.2678.1 ID=mRNA_H-elongata_contig13827.2678.1|Name=mRNA_H-elongata_contig13827.2678.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5476bp|location=Sequence derived from alignment at H-elongata_contig13827:2025..7500+ (Himanthalia elongata Himel1 dioecious)
CTGGATGAGGGCAATCGCAACATGGCAAGGGCGGCACACATGGTAGATTT GAGACCTTTACCAACTGGAACGACGCCGGATCCACGACATTGGGGCAAGA GCTCGAACCACAGGGGCATGATTGAAAAGGCACGATCACTTGTTAAGAGC TACCGCACCGCAGAGCGGAATAGTTTTTTTCAGGAAGGCACAGTTACAAA CGCACGGCCTGCGTAACGTCGTCCGTGTTTGTTGTCTCGAGCTAACCTGC AGCTTGGGTGGACACCTTAGGCTGTCAGGCTTGTTGGGGCTCGTGAGCCA CTTCTATATCTCATTTGTTTGTATGAACACTGGCGCGTACATCTCAATTG AGGATCGGGTAACCCTCTAGGGAGCTGAAGGGCACAAGTCTTACTTCGGA GGTTCCCACCCGCGTGGTTACACGGCGGGCTTCAGGTGATCAACGTCGAG CGTACGAGTATCAGCGCGTATGTCACGTGCGGAAGGGACGGAACGATCAA GTTTTGGCACAAGGACACATTTGCACACATCCGAAGCATCAACCACCTCG ATACGATCAAAGCTACCTACTCTTCCCTGGTGCTGGTGTGTGCGGCACGG TAAAACAGCGGAAGCTACGCCAGAACTCTCTATGATTCAATTCAATTCAT CGCAGGCCTAATTCTACACCTGAGCTTGTCTCGTGCGTCGCAGGAACGGT TTGAACCCTCTGTGTACGCAGCCTGACATTCGCCCAGCAGACGTAACCAA AAGAATCGATCAAAGCGCTACCGATTGTTACTTCAGGGTTTTGTTGTTGT TGGGAGGGAGGTTGCTTCTGGTTTTGGCTCCATTCTTCATTTCCTCTCCT GCATTGTGTACTGCAGTATACTGTACTGTAGTAAAGTGATAGTGTATAGT GTATAGTGTATAGTGTATACTATAGTGTATGGTGTATAGTATATAGTGTA TAGTGTATAGTGTAAAGTGTATATTGTATAGTATAGTGTATAGTATAGTG TATAGTGTATAGTGTATAGTGTAGTGTATAGTATTTTCCGAACGATATTA AAATCATATACAACTATACAGTAGTCCCCGTAACCCTTCCTAACCACCAC AAACAGTTCTGGTTTGGCATGCCCATATAACATATGATGATGAACAATCA CATACTGTATGATGATTTCGTGCTTAAATGTATTAATAGTTAAAATGTAA ACATTGGAACCTGACGATAGTTGGTCCCCTGGACTACATCTTTCATGGTG CGAAGGAGGCGTGGATGTTCGGAGGGTTGGAATGAGTTCATTTGTTTCTG AACAACAATATAAGAGATGAAATGAAGAATGGAGCTAAAACCAGAAATAA TTTCCCTCCCAAGAAAACCTTGGATTTCTACTTGGTTAACAAATAAATGT AATAATCACATTTCTACATTACACCGGGTTGGAGAATAAACAACAACAAC AACAACAACAACGGCGGACAGTACAGACAGGCGGTGGGTCTCTTTCTTCC GCTACATGCACCAGATTCAACCGGCGTTGAGAGAATGGGCAGACTGACAC GAGACGGGACGGTCAAACCCGTCTCGCAAGACCAAACTCTCACGCGCGAA CGGAGACAGGGAACATTGGATTGGCATATCCCTGTCCAGCTGACCGCAAG AAGGAGGCAATCAATCAAATTCGGTTGACTTGATCCTTATTCTGCTATCT GATGACGTCATGATCTGATATATCTCATCTCATGTGATGACATCATGACC ACACACAGTAAACTCCAATTTCTCGACTATCGAGTTTGCGCTCTTCTTGA CTATCCGAGCTAGGCTACCAAGTCGGGCTTCTGTATAGTATTCTGTGCAG TTGTCGGTATTATTAGTAGTCAGGCGTTTCCCTTCGCTGTACAGTAGAGA CTGTCATTCCTTGACTAGTATTATATCCGAGCTACCCTACCAAGTCATCG AGGGTCTGAACGTACGTGTAGTCCAGTTTTTTCGCCGTAGTCAAAATGAT ATAATTCGTGCGTCGTCATCGCCGAAATTACACCTAGTAGGGGCGAAAGA GTTGGGGTGCGGAGGGAGGCAAGCGGGGCGTTTTCCCCTCGCCAGCTAGG AAAGCGGTGAACTCGATAAAATGTGCTTGGGTATGTGATATACAGCAGGT GAGGTCAGGTCAGGTCAGATCAAGTCAGGTGCACAGTAGTAGCGGGGGGC GGGTGTCAAAGCGGGGGGCAAGGCATAGTTTCGGCAGTTCTTTCCTGCAC CTGGGTGTCACTGCAAGGTACGTATGTTGCCCGAAACGCCGTCGACCCAT CCATGGAATCCTTTGGCAGAAACACTTGTTACTCGTCCCATGTACACGTA ATAAGCAGATGCCTTTGAGCAACAGGATCGCAGTGGCTTGTCTTGACCGC ACGGTGAGCTTCTACGAGATGCTCACGGGCGAATTTGTTTGCAGGATAGC GGGTCTTCGCTCCTCGCCAACCTGTGTCGACTGCCTTCAGGTAGGGCCAG TTGAAAGGAATATTTTGGTTGGGTGATTGTGTCCCTTGAACAGCTGGGAA GATGCCTAGGATTATAGTATTCACCCTACAACTGATTGCGAAAACGGTAC CTACCATCCCTAGACTATACCTACACCTTACGGAGGATGATGTGGATCAA TCGTATAAACGAAGAACGTCTCCGGAAATATATGTGATTGGTGAATTTTA CGGGTTTTGTTTTTTGTTTTACTTGCTGGGCGTATTTTGCGTCGGTCGGT CGGTACCGGAAGGTCAGCGCTATCAAGCAGCAAGTAATCTTCGGTGATTT GGACGGTCGCCTGCACGTTTGGGCTTTCGGCAAGAACTTTTACATCATCT CTGGTAAGTTGTTTGTTGCTGTTATTGGCTTTGATTTGCTGCTGCTGTCG ATTCGCACTGTCAACAACAACACAGCGAAGTGCCCTTGCAACTGCAAGGA TTTGTTGTGGCACAAATTTCAGCCAGCCATAGAGACCAATTGTCACTACT CCCGTTTGTGCCCTCCAAGAGGTGCTCTCCAAGAGGCACGAAGACCCGCG GGTCACATCTTGTTGACCTCCTCTCCCCCCCCCGCATAGCACCAGAGATC CGATATCGATACAAAACCGCCGTCCAATCAGCCGACAACATCTTAATAAA TCCTACCCGAGTTGTTGCGACGATATCCTTAGGGTGTACGGATTACAAAA TAGGCGTAGAGGTGTAATCGATATAAGAAGCGAGAACGATGCCTGGACTT ACTGCGCAGAGCTGCCTCGTGTCGTCAATACCATGACGATCAACAGCCTC CCATTGGCAACGCTTCTGGAAATATTTTCCTTAGAACTCTTTGTTTATTT TTTCTTACTCTTCTTTCGCGGCGCCACCCCGCTATAGGTCCCCAGGATCC TCGCGAGGCAGCCGAACTCAACGGCAACTTCTCGGACCAGATTCACGCGG GGGCTATTTGCCACGTGGCTTACGTCAACGACATCAACGCTGCTGTCACG TGCGGCCTAGATGGCAAGGTGCACTTTTTCGATATCGTAAAGCGGCGACA ACTAAGGACCTTCGATGGGCACGACAACCACGCCGTTTTTTCCTTTGTCT ACTGCACTAGGTGCGGGCCGATACAACATGCTCCGCAAGAAGCTCAGTAC AGATTGGATGAAGTAGGACGATGTAGAACGCATACCTATGTAAGCTAGCA CCTGGACATGAGAGGAAGCGCCTCGAAGAACGTTGCGCACCTGGTGCTGC TCCACACCCTGACGATGAATACTCGGCACGATTATAACACTAAAATATCG CCTTCTACTGGCTCGTCGAAAAAGCGAGAAAGCCCCTGCAGTGCTTCAGT TTCATATTAGAATAACATCTACTGTACCCACGTGGTCAAGATGCATAATC AACAAGTCTTCTGCTCACCCATGAAGGTCGCCGCTCGCTCGCTCCTTCTC TATGTCGACATCCTATACGTGTCACTGTCGTCACTGCCACTGTTACTGTC GCTGTACCGGGATCCAAAAATGTTCGACATAAAAGACATCGCTTCTTCGC GTCCGCGGGCATGGGCCGCGGGGTGGTGTTCTGGAATCCCTACACTATGT GCGTCTTGGCCAAGGGGGAGGGGGAGGGGCACGCTACTAATAACGTAAAA CACTGCATGATAGACGAAGAGAGCAGTCGCGTCATCACGGTCTCCACCGA CAAAACAGTTTGCTGCTGGGACAGCACCACATTCCGATGCCTCCAGGCGA GAAGAAGAGCAAGAAGAGAGAAAGGGGGGAGGAAACCCGTATCTACGGTA GTACTATTATCGTCCACGCCCGTCCATAGCCACAATAATTGCAGTCATTC CTTTGCAAGAAGTCTCCATCGATGCATGTATCATGTTTTACATACATACG AGCTAGGTGCGGTGCGGTACCTGCTGTCGGAGATGGGCTGATACTGCTGT GCTTTCATACCACACCGATGGCTTCTTCTGAGAAGATTGTGCTCTAGCTC CTTCGCTGTTGCGCACGATACACCTTGACTCGTTTTTATTTCACCGGCAT AATATCTCTCCCTCTCTCCCGCCTTTTGTTTCTCTCTCTGGAAAGTAGAT CTTCAAAGACGGCCGCTCGCATCACCCGGAAGACACCATTACCGCAGCTC TGTGGGACAAAAATAGGAGGTCGCTGGTGCTCGCTGGGAATACGCTGGGG GTTTGGAAGAACAAGGGGGCGATCCAAGCCAGCACGCGATCCCACGAGGC GTCGGTGACCGCGGCGCTGTACAATAAGTACTACAACCAGGTGGTGCCGC ACTTTGACGAATGGACTAATGGAGGGAGCCTGAAAAGGCGGCGCGGGCAT GACTGCCAGCGTAGACTCTACGAGCTTCCTTCCCGCAAAAACAAATTATC ATCGCCTAGCGGCCTGATCGTACGTAGCAGTCCGGCCGCGTTCAAAAAGT AGTATAATATCGGATGATAAATAATGCCTTATCAATAATGTCTTACTGCC CTCTCCTCTCGTCTCCTCTTATTCTCTTTCTCCCCTCCCCTCACCTCCCC GCGCCATTCCGCCCTCACCTCCCCGCGCCATTCCGCCGATCAAGGTTGTA TCCGGAGACACCATGGGCAATATTCATGTGTGGCTCGTCGAAACGGGGGA GGTGGCTTTCAGGTACGCCCAGAACGACAAATCCGCAACGTTCCTGCTCC AAACCCTAACGATCCAGACCACTAAACAACCGTGTTTGACTGAGGACACG TTAGGAAAGAAGAGTACATCGTATGAGCGAAGAGCGCTAGTCCATGCCCT AGTGGAGGTCACACGCGCTCGGCCATCTGGACGTGGCCTGGTGACCTGGT CTCAGGTACGGTCAAGCGCACGGCTCATCCAAAATAAGCTGCATGTGCTT TGACACATCACAGAGGAGACTCGTAACCGGGGCGAACGACGGCGGGGTCA AGCTATGGAATTTCAGCAACGGCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig13827:2025..7500+

>mRNA_H-elongata_contig13827.2678.1 ID=mRNA_H-elongata_contig13827.2678.1|Name=mRNA_H-elongata_contig13827.2678.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2922bp|location=Sequence derived from alignment at H-elongata_contig13827:2025..7500+ (Himanthalia elongata Himel1 dioecious)
ATGGCAAGGGCGGCACACATGGTAGATTTGAGACCTTTACCAACTGGAAC
GACGCCGGATCCACGACATTGGGGCAAGAGCTCGAACCACAGGGGCATGA
TTGAAAAGGCACGATCACTTATGGCAAGGGCGGCACACATGGTAGATTTG
AGACCTTTACCAACTGGAACGACGCCGGATCCACGACATTGGGGCAAGAG
CTCGAACCACAGGGGCATGATTGAAAAGGCACGATCACTTGTGATCAACG
TCGAGCGTACGAGTATCAGCGCGTATGTCACGTGCGGAAGGGACGGAACG
ATCAAGTTTTGGCACAAGGACACATTTGCACACATCCGAAGCATCAACCA
CCTCGATACGATCAAAGCTACCTACTCTTCCCTGGTGCTGGTGATCAACG
TCGAGCGTACGAGTATCAGCGCGTATGTCACGTGCGGAAGGGACGGAACG
ATCAAGTTTTGGCACAAGGACACATTTGCACACATCCGAAGCATCAACCA
CCTCGATACGATCAAAGCTACCTACTCTTCCCTGGTGCTGGGGCGAAAGA
GTTGGGGTGCGGAGGGAGGCAAGCGGGGCGTTTTCCCCTCGCCAGCTAGG
AAAGCGGTGAACTCGATAAAATGTGCTTGGGTATGTGATATACAGCAGGG
GCGAAAGAGTTGGGGTGCGGAGGGAGGCAAGCGGGGCGTTTTCCCCTCGC
CAGCTAGGAAAGCGGTGAACTCGATAAAATGTGCTTGGGTATGTGATATA
CAGCAGCAGATGCCTTTGAGCAACAGGATCGCAGTGGCTTGTCTTGACCG
CACGGTGAGCTTCTACGAGATGCTCACGGGCGAATTTGTTTGCAGGATAG
CGGGTCTTCGCTCCTCGCCAACCTGTGTCGACTGCCTTCAGCAGATGCCT
TTGAGCAACAGGATCGCAGTGGCTTGTCTTGACCGCACGGTGAGCTTCTA
CGAGATGCTCACGGGCGAATTTGTTTGCAGGATAGCGGGTCTTCGCTCCT
CGCCAACCTGTGTCGACTGCCTTCAGGTCAGCGCTATCAAGCAGCAAGTA
ATCTTCGGTGATTTGGACGGTCGCCTGCACGTTTGGGCTTTCGGCAAGAA
CTTTTACATCATCTCTGGTCAGCGCTATCAAGCAGCAAGTAATCTTCGGT
GATTTGGACGGTCGCCTGCACGTTTGGGCTTTCGGCAAGAACTTTTACAT
CATCTCTGGTCCCCAGGATCCTCGCGAGGCAGCCGAACTCAACGGCAACT
TCTCGGACCAGATTCACGCGGGGGCTATTTGCCACGTGGCTTACGTCAAC
GACATCAACGCTGCTGTCACGTGCGGCCTAGATGGCAAGGTGCACTTTTT
CGATATCGTAAAGCGGCGACAACTAAGGACCTTCGATGGGCACGACAACC
ACGCCGTTTTTTCCTTTGTCTACTGCACTAGGTCCCCAGGATCCTCGCGA
GGCAGCCGAACTCAACGGCAACTTCTCGGACCAGATTCACGCGGGGGCTA
TTTGCCACGTGGCTTACGTCAACGACATCAACGCTGCTGTCACGTGCGGC
CTAGATGGCAAGGTGCACTTTTTCGATATCGTAAAGCGGCGACAACTAAG
GACCTTCGATGGGCACGACAACCACGCCGTTTTTTCCTTTGTCTACTGCA
CTAGACATCGCTTCTTCGCGTCCGCGGGCATGGGCCGCGGGGTGGTGTTC
TGGAATCCCTACACTATGTGCGTCTTGGCCAAGGGGGAGGGGGAGGGGCA
CGCTACTAATAACGTAAAACACTGCATGATAGACGAAGAGAGCAGTCGCG
TCATCACGGTCTCCACCGACAAAACAGTTTGCTGCTGGGACAGCACCACA
TTCCGATGCCTCCAGGCGAGAAGAAGAGCAAGAAGAGAGAAAGGGGGGAG
GAAACCCACATCGCTTCTTCGCGTCCGCGGGCATGGGCCGCGGGGTGGTG
TTCTGGAATCCCTACACTATGTGCGTCTTGGCCAAGGGGGAGGGGGAGGG
GCACGCTACTAATAACGTAAAACACTGCATGATAGACGAAGAGAGCAGTC
GCGTCATCACGGTCTCCACCGACAAAACAGTTTGCTGCTGGGACAGCACC
ACATTCCGATGCCTCCAGGCGAGAAGAAGAGCAAGAAGAGAGAAAGGGGG
GAGGAAACCCATCTTCAAAGACGGCCGCTCGCATCACCCGGAAGACACCA
TTACCGCAGCTCTGTGGGACAAAAATAGGAGGTCGCTGGTGCTCGCTGGG
AATACGCTGGGGGTTTGGAAGAACAAGGGGGCGATCCAAGCCAGCACGCG
ATCCCACGAGGCGTCGGTGACCGCGGCGCTGTACAATAAGTACTACAACC
AGATCTTCAAAGACGGCCGCTCGCATCACCCGGAAGACACCATTACCGCA
GCTCTGTGGGACAAAAATAGGAGGTCGCTGGTGCTCGCTGGGAATACGCT
GGGGGTTTGGAAGAACAAGGGGGCGATCCAAGCCAGCACGCGATCCCACG
AGGCGTCGGTGACCGCGGCGCTGTACAATAAGTACTACAACCAGGTTGTA
TCCGGAGACACCATGGGCAATATTCATGTGTGGCTCGTCGAAACGGGGGA
GGTGGCTTTCAGGTTGTATCCGGAGACACCATGGGCAATATTCATGTGTG
GCTCGTCGAAACGGGGGAGGTGGCTTTCAGGTACGGTCAAGCGCACGGCT
CATCCAAAATAAGCTGCATGTGCTTTGACACATCACAGAGGAGACTCGTA
ACCGGGGCGAACGACGGCGGGGTCAAGCTATGGAATTTCAGCAACGGCAA
GGTACGGTCAAGCGCACGGCTCATCCAAAATAAGCTGCATGTGCTTTGAC
ACATCACAGAGGAGACTCGTAACCGGGGCGAACGACGGCGGGGTCAAGCT
ATGGAATTTCAGCAACGGCAAG
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