mRNA_H-elongata_contig13809.2668.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: D8LC95_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI) HSP 1 Score: 389 bits (1000), Expect = 4.380e-133 Identity = 201/233 (86.27%), Postives = 219/233 (93.99%), Query Frame = 1
Query: 1 LAMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHYAKK 699
LA LHT+AH TAVL+LGAGAVSFTHIVK+AEPVFTAGFSA LLGQTF PVY SL+PIIAGVSLAS+KELSFSWVAFGNAMGSNTASALRGI+GKKQMGKPVGENM+PANLYAVLTVLA CFL+PV+LLVEG+K KPAWDAAIAAGAT+K L++T+L SGL YYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIV+ACI FRTPMTPL+IAGS+IA+ GTLLYSLVKAHY KK
Sbjct: 175 LAALHTVAHVTAVLSLGAGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSLVKAHYEKK 407
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A7R9YBK2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK2_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.020e-96 Identity = 155/233 (66.52%), Postives = 186/233 (79.83%), Query Frame = 1
Query: 1 LAMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHYAKK 699
LA LHT AH TAVL+LGAGAVSFTHIVK+AEP F+A F+A+L+GQ F PVY +LIP+IAGV++AS+KEL+FSWV+FGNAMGSNT SALRGI KK MG P GENM ANLYAVLT + LTP++L++EG K AW AA+AA + + L L SGL YY YNEVAFLAL V+P+THAVGNTIKRVV+I+++ IVF T MTP AIAGSS+AILGTL+Y+L K +Y KK
Sbjct: 151 LASLHTGAHLTAVLSLGAGAVSFTHIVKAAEPAFSALFAAVLMGQVFAAPVYLTLIPVIAGVAVASMKELAFSWVSFGNAMGSNTFSALRGIYAKKNMGNPQGENMNSANLYAVLTCFGIALLTPIALILEGGKMGAAWTAAVAAYGSQQLLLWHALLSGLYYYSYNEVAFLALSQVHPITHAVGNTIKRVVVIIASVIVFGTTMTPTAIAGSSVAILGTLMYALAKNYYQKK 383
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A6U4KWF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KWF3_9STRA) HSP 1 Score: 287 bits (734), Expect = 5.900e-93 Identity = 149/233 (63.95%), Postives = 181/233 (77.68%), Query Frame = 1
Query: 1 LAMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHYAKK 699
LA +HT AHATAVL+LGAGAVSFTHIVK+AEP F+A F+A+ LGQ F PVY +L+P+I GV++AS+KELSFSW++FGNAMGSNT SALRGI KK MG PVGENM ANLYAVLT + + L P++LL EG K+ +W A +AA L +L SGL YYLYNEVAFLAL VNPVTHAVGNTIKRVV+I+++ +VF T MTP A+AGS++AI GTL Y+L K + K
Sbjct: 158 LASMHTAAHATAVLSLGAGAVSFTHIVKAAEPAFSALFAALFLGQVFAAPVYAALVPVIGGVAVASMKELSFSWMSFGNAMGSNTFSALRGIFAKKNMGNPVGENMNAANLYAVLTCMGIGLLFPIALLTEGSKWAASWAAGVAAYGGKALLAKHMLFSGLFYYLYNEVAFLALSKVNPVTHAVGNTIKRVVVILASVVVFGTQMTPTAVAGSTVAIAGTLGYALAKNAFPNK 390
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A7S2SP14_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP14_9STRA) HSP 1 Score: 268 bits (685), Expect = 9.480e-86 Identity = 143/230 (62.17%), Postives = 175/230 (76.09%), Query Frame = 1
Query: 4 AMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQM-GKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHY 690
A+ H H AVL+LGAGAVSFTHIVK++EPV +AG +AI L Q PLPVY SL+PII GV+LAS+ ELSF+W+AFG AM SN ASA R I+ K + GKP+GEN+TP NLYAVLT+L+ L P++L E + W+AA+A+G T K L T+ SG+LYYLYNEVAFLALDSV PVTHAVGNTIKRVVII+++ +VF T +TPL AGS IAI GTL+YSL K +
Sbjct: 150 ALCHLGTHVGAVLSLGAGAVSFTHIVKASEPVVSAGLTAIFLKQIMPLPVYLSLVPIIGGVALASVTELSFTWLAFGAAMMSNVASASRAILSKTVLSGKPMGENLTPQNLYAVLTILSFFMLLPMALAFEAGSIQSVWNAAVASGLTPKYLAQTIAASGILYYLYNEVAFLALDSVAPVTHAVGNTIKRVVIILASIVVFNTQLTPLGAAGSGIAIAGTLMYSLAKNKF 379
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A836CHH7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA) HSP 1 Score: 267 bits (683), Expect = 2.340e-85 Identity = 136/229 (59.39%), Postives = 175/229 (76.42%), Query Frame = 1
Query: 13 HTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHYAKK 699
H I+H +AV+ LGAG+VSFTHIVK+AEP FTA FSAI L Q FP+PVY SL+P++AGV+LAS+KEL+FSW A AMGSN A++ R I+ K+ MG+P G NM ANLY VLT+LA L PV+ ++EG KF WDAA+ G + ++T L SGL +YLYNEVAFLALD+V+PV HAVGNT+KRV II S I+F +TPL + GSS+AI+G L++SLVK +Y++K
Sbjct: 157 HAISHLSAVIGLGAGSVSFTHIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKELNFSWTALCGAMGSNVAASSRAILAKRSMGRPKGTNMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAALLKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKITPLGMVGSSLAIVGVLIFSLVKEYYSRK 385
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A8J6C741_DIALT (TPT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT) HSP 1 Score: 265 bits (678), Expect = 8.000e-85 Identity = 140/229 (61.14%), Postives = 171/229 (74.67%), Query Frame = 1
Query: 1 LAMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAH 687
+A++H I H V++LGAGAVSFTHIVK+AEP F+ SAI FP+PVY +L+P++ GV +AS+ ELSFSWVAF NAMGSNTA +LR I KK M KP GENM ANLY VLT+++ L P +L++EG K K W AAIAAG T+ L T L SGL YYLYNEVAFL LD+V+P+THAVGNTIKRVVII+++ +VF T MTPL GSS+AI G LLYSL K +
Sbjct: 140 IALMHGIGHLCTVISLGAGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLAKQY 368
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A7S1XYR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYR7_9STRA) HSP 1 Score: 262 bits (670), Expect = 1.460e-83 Identity = 135/230 (58.70%), Postives = 176/230 (76.52%), Query Frame = 1
Query: 1 LAMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHY 690
+A HT H V++L AG+VSFTHIVK+AEP F+ SA+ L F LPVY +LIPI+ GV++AS+KELSF+WV+F NAM SNTA ++R I KKQM P+GENM+ NLYAVLT+++ L P++ ++EG+K PAWD+A++AG S LT +L SGL YYLYNEVAFLAL++V+P+THAVGNTIKRVVIIV++ I F+T M+ +I GSSIAI G LLYSL K ++
Sbjct: 144 IATCHTTGHLCTVISLSAGSVSFTHIVKAAEPFFSTVMSAVFLKSFFKLPVYLTLIPIVVGVAMASLKELSFTWVSFLNAMASNTAFSMRAIFSKKQMNAPMGENMSAPNLYAVLTIMSFLGLAPLAGVIEGRKIGPAWDSALSAGLESSELTKKILMSGLSYYLYNEVAFLALNAVHPITHAVGNTIKRVVIIVASVIFFKTKMSMQSIIGSSIAIFGVLLYSLAKQYF 373
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A835ZDI5_9STRA (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA) HSP 1 Score: 261 bits (666), Expect = 4.740e-83 Identity = 132/233 (56.65%), Postives = 173/233 (74.25%), Query Frame = 1
Query: 1 LAMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHYAKK 699
LA LHT +H +AV+ LGAGAV F H+VK+ EP+FTA SA+LL + PLPVY SL+P++ GV+LAS+KELSFSWVAF AMGSN A+A RG++ KKQMG+ NM P NLY V+T++A L P +L+VEG + K W AA AAG TS+++ ++ SGL +YLYNEVAF L+S++ THAVGNT+KRVV++ + +VF +TPL GS++AI G L+YSL K HYAKK
Sbjct: 89 LAALHTTSHISAVIGLGAGAVGFVHVVKALEPLFTAALSALLLQKFMPLPVYASLLPVVGGVALASMKELSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAPNMDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAAGHTSRAIWRGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLTPLGATGSAVAIGGVLVYSLTKNHYAKK 321
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA) HSP 1 Score: 259 bits (661), Expect = 8.270e-82 Identity = 137/232 (59.05%), Postives = 175/232 (75.43%), Query Frame = 1
Query: 4 AMLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKPVGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHYAKK 699
A +H +AH TAV++LGAGAVSFTHI+K+AEP FT+ FSA+ L Q F VY SLIP++ GV++AS+ E FSW+AF +AM +NTASA RGI KK M +P G+NM PANLYAVLT+LA + PV+ LVEG K KPAW+AA+A + + L +++SGL +YLYNEVAFLALDSV+PVTHAVGNTIKRVVII ++ +VF+ P+T GS++AI G LLYSL K+
Sbjct: 174 AAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAV-TSQRQLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPITLQGYIGSAVAIAGVLLYSLAVERTKKR 404
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Match: A0A0G4G2H6_VITBC (TPT domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G2H6_VITBC) HSP 1 Score: 258 bits (658), Expect = 3.810e-81 Identity = 138/230 (60.00%), Postives = 168/230 (73.04%), Query Frame = 1
Query: 7 MLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYGSLIPIIAGVSLASIKELSFSWVAFGNAMGSNTASALRGIVGKKQMGKP--VGENMTPANLYAVLTVLALCFLTPVSLLVEGKKFKPAWDAAIAAGATSKSLTTTVLTSGLLYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVSACIVFRTPMTPLAIAGSSIAILGTLLYSLVKAHY 690
+ HT H AV+ALGAGAVSF HIVK+AEPVFTAG SA +LGQ Y +LIP++AGV LAS KELSF+W +FG AM SN +S+LRGI GKK M P VGEN+T AN Y++LT+++ L P+S E K P W AA+A G T +L V+ SG+ YYLYNEVAFLAL VNPVTHAVGNT+KRVVII+++ +VFR P+TPL GS +AILGTLLYSL K +
Sbjct: 192 LFHTGTHVGAVVALGAGAVSFAHIVKAAEPVFTAGLSAAVLGQYLSPITYSALIPVVAGVGLASAKELSFTWTSFGFAMLSNISSSLRGIFGKKTMSDPKAVGENLTAANQYSLLTIISCIALLPLSAFFEYKTLVPNWQAAVANGVTDLALAKLVVLSGIFYYLYNEVAFLALSRVNPVTHAVGNTMKRVVIILASIVVFRNPITPLGAIGSGVAILGTLLYSLAKQKF 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13809.2668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13809.2668.1 >prot_H-elongata_contig13809.2668.1 ID=prot_H-elongata_contig13809.2668.1|Name=mRNA_H-elongata_contig13809.2668.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp MLHTIAHATAVLALGAGAVSFTHIVKSAEPVFTAGFSAILLGQTFPLPVYback to top mRNA from alignment at H-elongata_contig13809:1379..2380+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13809.2668.1 ID=mRNA_H-elongata_contig13809.2668.1|Name=mRNA_H-elongata_contig13809.2668.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-elongata_contig13809:1379..2380+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13809:1379..2380+ >mRNA_H-elongata_contig13809.2668.1 ID=mRNA_H-elongata_contig13809.2668.1|Name=mRNA_H-elongata_contig13809.2668.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig13809:1379..2380+ (Himanthalia elongata Himel1 dioecious)back to top |