prot_H-elongata_contig13737.2629.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13737.2629.1
Unique Nameprot_H-elongata_contig13737.2629.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length653
Homology
BLAST of mRNA_H-elongata_contig13737.2629.1 vs. uniprot
Match: D7FK98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK98_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.510e-51
Identity = 188/567 (33.16%), Postives = 238/567 (41.98%), Query Frame = 0
Query:    1 MLALDTLQWSTLAPHPLSFVAPAVHGHTAVEDPTHSGRIIVFGGRGGTHWNTEVVLTFNSKRHFWSIAVCDTTIRSPSSASERRASFTSTTAKPPAEEAGRLRVTFGDPAKNSQSADGISMIAGRREEPVSVQKQSWSKVHITPHTRALMFLSLHTPIPISTLHADSSVTTQYAGNEAGRGVNTADKLPHHRSGHTCFIWDPRDTARSSSGTIAGVGSTGGSTSNTKPDAITGAENRPSERSDRDASEPSPKR-SWNRGHDNEEMAASENGGGVS-----------------------------------------------EQRGDRAEGP-------LPKPCIIMFGGSALRAGGGYAEAELHVLEDPPLEANIKVQHSEKGDETTVERGRISSIDEASGAPKGATAKRHSITKFETRTNAVLLEVHSIRQLGNQKLA---SKREDDMSYVESRIQSSILGERQKTRKVASGEEKINTPLSPHLDTASQCH----------HPNR-------------QVKAFLADTRSVDPNHRPASAPAH----SGGVDGSASGLNKTRGGSR 482
            MLALDTLQWSTL PHPL F APA+HGHTAVEDP H+GR+I+FGGRGG  WNT+V LTF  +++ WS+AVCD     P    E  A+ TS  A+     A  LRVT  D     ++        G  +EP +                         P P S  + D          E G+           R GHTCF+WDPR  A + +    G                 GA   P           SPKR S NRG      +   NG                                                     R  R   P       LP PCI+ FGGSALR GGGYA A LHVLE P  E N           ++   G ++S++ A+ APK       +  KF++ TN+VLL+VHS+RQLGN++L    S   +D+SY++ ++QS +LG   +T +    +E  N+  SP   TA              HP               +VKAFLAD R  +   RP SAPAH     GG  G      K  GG R
Sbjct:  256 MLALDTLQWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKSWNTQV-LTFQFRKNLWSMAVCDMAEPPPD---ELNANQTSA-ARGKRSSASPLRVTILDNPVIGRTEPS----RGGSDEPKAA------------------------PAPPSPNNTDDERPQHEPLGEPGQQAK--------RHGHTCFVWDPRQAALACNDGGGGXXXXXXX----XXXXXDGARGLPV----------SPKRGSQNRG------SGRSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRNRRTPTPSSPTDESLPHPCIVTFGGSALRTGGGYARAALHVLETPAPEDNDSDNDGGGRKASSPSTGILASLELAADAPK------QTFNKFQSFTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVGGRTLEADGSDEDRNSKTSPAATTAGGSKAKTRADVKPPHPGAGRLGSFPTGYEQARVKAFLADARPANARIRPVSAPAHLVEPGGGSGGILDKGRKAAGGRR 755          
BLAST of mRNA_H-elongata_contig13737.2629.1 vs. uniprot
Match: A0A6H5JRA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA7_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.450e-50
Identity = 182/581 (31.33%), Postives = 245/581 (42.17%), Query Frame = 0
Query:    1 MLALDTLQWSTLAPHPLSFVAPAVHGHTAVEDPTHSGRIIVFGGRGGTHWNTE----VVLTFNSKRHFWSIAVCDTTIRSPSSASERRASFTSTTAKPPAEEAGRLRVTFGDP---AKNSQSADGISMIAGRREEPVSVQKQSWSKVHITPHTRALMFLSLHTPIPISTLHA-------------------DSSVTTQYAGNEAGRGVNTADKLPHHRSGHTCFIWDPRDTARSSSGTIA-------------------------------------GVGSTGGSTSNTKPDAITGAENR-----PSERSDRDASEPSPKRSWNRGHDNEEMAASENGGGVSEQRGDRAEGPLPKPCIIMFGGSALRAGGGYAEAELHVLEDPPLEANIKVQHSEKGDE-------TTVERGRISSIDEASGAPKGATAKRHSITKFETRTNAVLLEVHSIRQLGNQKLA---SKREDDMSYVESRIQSSILGERQKTRKVASGEEKINTPLS-------------PH-------------LDTASQCHHPN--------------RQVKAFLADTRSVDPNHRPASAPAH 463
            MLALDTLQWS L PHPL F APA+HGHTAVEDP H+GR+I+FGGRGG +WNT+     VLT   +++ WS+AVCD     P   +  ++S    T+K     A  LRVT  D     K   S  G          P S       +    P         +  P P S+L                             A  E       A  +PH R GHTCF+WDPR  A + +G  A                                       G+ GG++  + P    G EN      PS R           RS NR                +       +  LP PCI+ FGGSALR GGGYA A LHVLE P  E   +       D+       ++   G ++S++ A+GAPK       +  KF++ TN+VLL+VHS+RQLGN++L+   S   DD+SY++ ++QS +LG   +T +    +E  N+  +             PH              D+ ++   P+               QVKAF+AD R  +   RP SAPAH
Sbjct:  296 MLALDTLQWSILEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQGGNGKVLTCQFRKNLWSMAVCDMGEPPPDELNANQSS----TSKGKRSSASPLRVTILDNPVIGKTQPSRGGSDEPIAAPATP-SPNNTDDERPQNEPRREPGQQPKVKNPPPSSSLAGILASGGLKXXXXXXXXXXXXXXXXXXKAATEHSAAAMVA-MMPHQRHGHTCFVWDPRQAALACNGGGAEAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNCGAGGGASRKSSPKRPRGGENXXXXPLPSSRKXXXXXXXXX-RSRNR---------------RTPMPSSPTDESLPHPCIVTFGGSALRTGGGYARAALHVLETPAPEDGGRGNDDNDSDKDGGGRKGSSPSTGILASLESAAGAPK------QTFNKFQSFTNSVLLKVHSLRQLGNEQLSFGDSYNPDDLSYIDLKVQSVVLGVGGRTLEADGSDEDRNSTTAEGSRAIKRANVKPPHPCAGRLGSYQSIFSDSKTRVTQPSVCNTTRAGGFWSGFPQVKAFIADARPPNARIRPVSAPAH 848          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13737.2629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK98_ECTSI1.510e-5133.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRA7_9PHAE1.450e-5031.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 6..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13737contigH-elongata_contig13737:755..5562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13737.2629.1mRNA_H-elongata_contig13737.2629.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13737 755..5568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13737.2629.1 ID=prot_H-elongata_contig13737.2629.1|Name=mRNA_H-elongata_contig13737.2629.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=653bp
MLALDTLQWSTLAPHPLSFVAPAVHGHTAVEDPTHSGRIIVFGGRGGTHW
NTEVVLTFNSKRHFWSIAVCDTTIRSPSSASERRASFTSTTAKPPAEEAG
RLRVTFGDPAKNSQSADGISMIAGRREEPVSVQKQSWSKVHITPHTRALM
FLSLHTPIPISTLHADSSVTTQYAGNEAGRGVNTADKLPHHRSGHTCFIW
DPRDTARSSSGTIAGVGSTGGSTSNTKPDAITGAENRPSERSDRDASEPS
PKRSWNRGHDNEEMAASENGGGVSEQRGDRAEGPLPKPCIIMFGGSALRA
GGGYAEAELHVLEDPPLEANIKVQHSEKGDETTVERGRISSIDEASGAPK
GATAKRHSITKFETRTNAVLLEVHSIRQLGNQKLASKREDDMSYVESRIQ
SSILGERQKTRKVASGEEKINTPLSPHLDTASQCHHPNRQVKAFLADTRS
VDPNHRPASAPAHSGGVDGSASGLNKTRGGSRRERLAKPNCPGTAGVLST
KGAGGDQVFVRSATLSPMPLRANFTTTSLLPRRSTTCMLGPAMANSNLVE
GSREATASGARGIHREASRVGVRKSYESSTLGGGLRDGSCAEITRGTLSL
PSSAPAGGAMHTRFGRRGRPFILPRPTMAAHNGRMLMEFEWATASLYDTG
TI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller