prot_H-elongata_contig13726.2621.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13726.2621.1
Unique Nameprot_H-elongata_contig13726.2621.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
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BLAST of mRNA_H-elongata_contig13726.2621.1 vs. uniprot
Match: D7FWH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH3_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.190e-38
Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 0 
Query:    1 MRALNNAVVEAGSSMIGGKENEDALQVLTELLAQEVIDPNVGDEILWTRYGGSPLHQACSLDLPEATRALLEHGASLVQAFNKKTPLEVALTKKGSRCVKVIMDHIEKLEKQARASR 117
            ++AL NAV+   SS +   E+  AL++L ELLA++ +DPN GDE LW  YGGSPL+QAC+LDLP   +ALL+HGAS+VQ +  +TPL+ AL +K SRCVKVIM+HIEKLE QAR  R
Sbjct:   51 LQALCNAVI---SSSVDEDEDPHALKLLAELLAEDGVDPNAGDEALWDNYGGSPLYQACALDLPCTAKALLDHGASVVQVYKGQTPLQAALAQKKSRCVKVIMEHIEKLETQAREGR 164
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BLAST of mRNA_H-elongata_contig13726.2621.1 vs. uniprot
Match: A0A835ZIH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIH7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.320e-16
Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = 0 
Query:    1 MRALNNAVVEAGSSMIGGKENED---ALQVLTELLAQEVIDPNVGDEILWTRYGGSPLHQACSLDLPEATRALLEHGASLVQAFNKK----------TPLEVALTKKGSRCVKVIMDHIEKLE 110
            MRAL N VV A +   G ++ +    ++++L ELL  + +DPN G++ +   +GG+PLH A SLD P+   ALLEHGAS+V AF             TPLE+AL +        ++DH+ +LE
Sbjct:   52 MRALCNCVVSAANGEDGVEDRQPPQHSVELLKELLDMQGVDPNCGNQQILRAHGGTPLHLAVSLDAPKCADALLEHGASVVTAFQXXXXXXXXXXGVTPLELALQQGRGSWRDKLLDHVFRLE 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13726.2621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWH3_ECTSI2.190e-3858.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZIH7_9STRA6.320e-1639.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..120
e-value: 3.9E-11
score: 45.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 28..108
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 26..105
e-value: 2.2E-7
score: 31.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 50..77
score: 8.853
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 50..77
score: 8.87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13726contigH-elongata_contig13726:6637..8163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13726.2621.1mRNA_H-elongata_contig13726.2621.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13726 5823..8190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13726.2621.1 ID=prot_H-elongata_contig13726.2621.1|Name=mRNA_H-elongata_contig13726.2621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MRALNNAVVEAGSSMIGGKENEDALQVLTELLAQEVIDPNVGDEILWTRY
GGSPLHQACSLDLPEATRALLEHGASLVQAFNKKTPLEVALTKKGSRCVK
VIMDHIEKLEKQARASRRKSSSRCHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt