prot_H-elongata_contig13704.2610.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13704.2610.1
Unique Nameprot_H-elongata_contig13704.2610.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length716
Homology
BLAST of mRNA_H-elongata_contig13704.2610.1 vs. uniprot
Match: A0A6H5KNL3_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 3.340e-68
Identity = 280/754 (37.14%), Postives = 349/754 (46.29%), Query Frame = 0
Query:    1 MSQDEGSDSEPELVVQPRGHWDKTLAQSDVATHMKLGEMHVNAAAYAAVRAQAKGNNLSGMNSSHAXXXXXXXXHHLQAAQAQFQSIPGNSHISAPPQGMQMGRXXXXXXXXXXXXSQAHGMGMMGGMGAMHQGGPSMSGNSSGGYAGGERGTLGGASAAAPGGDGFRQHRQLHQQN-----------RHQQMEQHVYSELMSEGD----GGGRGPMGSGHVFSPPLPVVGGQGGGRQGGGMSSLGVAPGGGGAVGIVNAKALLPGTATSRPAQSSTVASLSKLLEGLEQTLDCPLEEEMYTPIDKRNSFCAQMLNIAQVLEDDPSMHVRQEIEDTKINPGNPLASNLMQKRRSSVSELAAYLHDMLEDGESSRTIATAPGWTLPPPVP--PGQVE--YPSRDGNENGVGGTRGTYKRAFDSDYGSYHSTNLDSSASGNPTAASGAPSNRCSGLAVAPGRWDGAMKREGGAGSSHDNDSPRSNPKRSRASPPPPIVAPFCGDTMKRPECGTRIEDVQGQEQGREGDAVVSRRGSRRMSLEGRRGSGRFTTSPNLVQALTCLASALPGHSDSEESKDGGDNSKASDHGAPSARKGGLASV------TIKNEES--TRKEEEXDSAVEAAVAAMAAETAKHKDRTGTTLASLAGRGGSTAINDVLTNFSIDRALEQLKSDD---------GKDDDETVEGRVDAS---QRGMRHRASVYVLMHAIATVNTANEGEWGQQEGQEPLDCPGTSVAAAI 715
            MSQ+EGSDSEPELVVQ RGHW+K+L  +DVATHM+LGEMH++AAA  A R                XXXXXX  HHLQAAQA  Q +PG    S  P G+ +G            X                   P +  +SS        G +  +SA  P     + H Q H+             +H+       +E  S  D    GG  G +G    + PPL  VGG+    +G  M          GA  +    +   G    RP Q+  V SLS+LLE LE TL+ PL EEMYTPI +RNSFCAQM+NIAQVLE+DPS+    E E           S L QKRRSSV+ELA YL DML++GES+R I   PGWTLPPP+P  PG +E  +PSR+G+ +G    R T+KR    D+ SY    +  +            S + +G   AP         E G GS         N KR+R  P    +A       + P              GR G         RRMS    R + +   SP++VQALTCLAS LP  SDSEE+      S A+  GA                 T  N E     K  E     EAA A             G  +     R GS AINDV+T FSID+ALEQLK +D                 E R + +   Q   + RASVYVLMHAIA V+TAN+  +G++E   PLD  G    AAI
Sbjct:  118 MSQEEGSDSEPELVVQARGHWEKSLGPTDVATHMRLGEMHMSAAALGAARXXXXXXXXXXXXXX-XXXXXXXAVHHLQAAQAHIQGVPGGDS-SRGPGGVVVGMPEMDAARGLPPXXXXXXX-------XXXXKSPFLRASSS--------GNVDRSSAQQP-----QPHMQQHRXXXXXXXXXXXXMQHRFGGASPMAEQSSPHDDARGGGDAGSLG----YMPPLAAVGGR---EEGMPM----------GAPTVEEVGSSARGMGDFRPGQTPMVLSLSRLLENLEHTLEAPLAEEMYTPIGQRNSFCAQMVNIAQVLEEDPSLQQGAEGESRSRR-----CSYLAQKRRSSVTELAYYLQDMLDEGESNRMITNTPGWTLPPPMPSAPGSLEGAFPSREGSGSG---NRVTFKRTAPEDFESYGEYGMAGNVGXXXXXXXXXSSRQAAGGMGAPQD----ASNEVGPGSF--------NLKRARGGPQ---MAERFPSGREGPVGAGXXXXXXXXXXGRHG---------RRMSEA--RMNAKVAASPSVVQALTCLASGLPETSDSEENTQ---ESTAAAVGAAXXXXXXXXXXXXXXXGTGVNREGFMPHKVSEERPGGEAAAA-------------GREMPLPNPRRGSKAINDVVTKFSIDQALEQLKGEDEGGXXXXXXXXXXXXXXEDRGEPNPCEQSSDKQRASVYVLMHAIAAVDTANDEMFGEEE---PLD--GVETEAAI 777          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13704.2610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNL3_9PHAE3.340e-6837.14HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13704contigH-elongata_contig13704:3036..7315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13704.2610.1mRNA_H-elongata_contig13704.2610.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13704 527..7390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13704.2610.1 ID=prot_H-elongata_contig13704.2610.1|Name=mRNA_H-elongata_contig13704.2610.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=716bp
MSQDEGSDSEPELVVQPRGHWDKTLAQSDVATHMKLGEMHVNAAAYAAVR
AQAKGNNLSGMNSSHAAAAAAAAAHHLQAAQAQFQSIPGNSHISAPPQGM
QMGRHLSPPPQSMDMGSQAHGMGMMGGMGAMHQGGPSMSGNSSGGYAGGE
RGTLGGASAAAPGGDGFRQHRQLHQQNRHQQMEQHVYSELMSEGDGGGRG
PMGSGHVFSPPLPVVGGQGGGRQGGGMSSLGVAPGGGGAVGIVNAKALLP
GTATSRPAQSSTVASLSKLLEGLEQTLDCPLEEEMYTPIDKRNSFCAQML
NIAQVLEDDPSMHVRQEIEDTKINPGNPLASNLMQKRRSSVSELAAYLHD
MLEDGESSRTIATAPGWTLPPPVPPGQVEYPSRDGNENGVGGTRGTYKRA
FDSDYGSYHSTNLDSSASGNPTAASGAPSNRCSGLAVAPGRWDGAMKREG
GAGSSHDNDSPRSNPKRSRASPPPPIVAPFCGDTMKRPECGTRIEDVQGQ
EQGREGDAVVSRRGSRRMSLEGRRGSGRFTTSPNLVQALTCLASALPGHS
DSEESKDGGDNSKASDHGAPSARKGGLASVTIKNEESTRKEEEEDSAVEA
AVAAMAAETAKHKDRTGTTLASLAGRGGSTAINDVLTNFSIDRALEQLKS
DDGKDDDETVEGRVDASQRGMRHRASVYVLMHAIATVNTANEGEWGQQEG
QEPLDCPGTSVAAAI*
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