prot_H-elongata_contig13670.2590.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig13670.2590.1
Unique Name	prot_H-elongata_contig13670.2590.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	433

Homology

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BLAST of mRNA_H-elongata_contig13670.2590.1 vs. uniprot
Match: A0A6H5KTR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR9_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.270e-15
Identity = 149/272 (54.78%), Postives = 168/272 (61.76%), Query Frame = 0

Query:   42 APKGQVLAGSGGLTDLLGIGAADSXXXXXXXXXXXXXARDGSI----SSSSKAGKIKSTAPPPNEKGLPEGFFDEDVEPPQVVVGAGGRSDKDEASTGR---QSDAAEGFGPKRAAELAXXXXXXXXXXXXXXXERLAALKAAGAVQAVAVAAISPAEVGDVGAAGEEEGEA---APKGSALPEGFFDDPEVDAKSRGVDLKAKKKQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLAVLMNKFESVGHKRRR 303
            AP+GQV A   GLT LLGIGA DS XXXXXXXXXXXX          + ++              +GLP GFFDED+                         Q+     FG +RAAELA  XXXXXXXXX    E+LAA++AAG +   A  A   A                  AP GSALPEGFFDDPE+DAKSRGVDLKA+KK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLA+LMNK ES+  ++R+
Sbjct:  125 APRGQVQAEGVGLTGLLGIGAGDSSXXXXXXXXXXXXXXXXXXRHPGTDAAPVSXXXXXXXXXXPEGLPAGFFDEDLAXXXXXXXXXXXXXXXXXXXXXXRPQAPPVGRFGAERAAELAAEXXXXXXXXXLREAEKLAAMRAAGLLVVAADGATGGAAADXXXXXXXXXXXXXXXAPNGSALPEGFFDDPEMDAKSRGVDLKAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLALLMNKSESIITRKRK 396

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BLAST of mRNA_H-elongata_contig13670.2590.1 vs. uniprot
Match: A0A835ZL64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL64_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 9.560e-5
Identity = 23/52 (44.23%), Postives = 41/52 (78.85%), Query Frame = 0

Query:  379 MREVAVASAPMDAAAADIASMLKGRKRKQQEELEEAFAGEYVPMDPLNWRAR 430
            +R+V+ A AP D AA ++++ML+ +++K+++   EAF G+YVP+DP +WRA+
Sbjct:  430 LRDVSGARAPDDGAALEVSNMLRSKRKKRRQAEREAFEGDYVPLDPSDWRAK 481

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig13670.2590.1 vs. uniprot

BLAST of mRNA_H-elongata_contig13670.2590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KTR9_9PHAE	2.270e-15	54.78	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835ZL64_9STRA	9.560e-5	44.23	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 247..281

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig13670	contig	H-elongata_contig13670:2939..6256 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig13670.2590.1	mRNA_H-elongata_contig13670.2590.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig13670 2830..6479 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig13670.2590.1 ID=prot_H-elongata_contig13670.2590.1|Name=mRNA_H-elongata_contig13670.2590.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=433bp
MLALLVAKKAGNGTGQKTARCVSPPKVQVQRVKAAPTTGSAAPKGQVLAG
SGGLTDLLGIGAADSSSDDDEEKNNGGKARDGSISSSSKAGKIKSTAPPP
NEKGLPEGFFDEDVEPPQVVVGAGGRSDKDEASTGRQSDAAEGFGPKRAA
ELAAEAAAEAEADAARDAERLAALKAAGAVQAVAVAAISPAEVGDVGAAG
EEEGEAAPKGSALPEGFFDDPEVDAKSRGVDLKAKKKQEEQSDWKEFMSF
AEEVKKVEKEEEQEEEAVEEDKEQYEELEQATMMGRLAVLMNKFESVGHK
RRRPSSSSGGNRETGDPVESGSPSSGSNLSNKADIGKGGDARQLEGMDKE
EMAWQSSSARKSSKRKDVEMSVEKTVTAMREVAVASAPMDAAAADIASML
KGRKRKQQEELEEAFAGEYVPMDPLNWRARGR*