prot_H-elongata_contig1367.2588.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1367.2588.1
Unique Nameprot_H-elongata_contig1367.2588.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length506
Homology
BLAST of mRNA_H-elongata_contig1367.2588.1 vs. uniprot
Match: D7FLV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV0_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 1.290e-111
Identity = 248/513 (48.34%), Postives = 313/513 (61.01%), Query Frame = 0
Query:   40 RRANELDMKILEAVLGAVSDAGQFEVAIRLLQQMRTAGKIPTKACYLYALRAASKWGRWDVVESLMTEMRVLGVGVVPPRAEGEEGESFVQ---------GTRKASRVLSSDCYPPLIEACAQAAAWEKAIKAYREGFVVGRR--EVKTVNYRVYECVLKACVATRDGHTALEVIRRQAAEPGLVQAIS---TSSAIGDRDESSGGPPDRRCWCLAAEALGRAGMIKEGHGVLRAMVNSGMPVRESTRVDVPSLMPLPSAEGG-FDWHRRXXXXXXXPARNKR--------GLP--LYLTFRRETVIRQVID--STRDDLVS---------EAGHASVESSKKRIAGLKLSKGVINGEACAAAAVAAAGGEREGRKRDLRLGRLLVSDWMDKNSKIKREVRSDVVVALGCKQRRMREFSETLALQKQESTL------------GEPSHCVDLFRRDASSSVQSTEASPMHLRPGGRRGRNEALTLRIHMRRTPGVLGRENGSKSELRGVEGKP 504
            ++A    MK LE VL AVS+AGQFEVA+RL+QQMR AG  P+K CYLY LRAASKWGRWDV+ESLM +MR L VGVV  +      +  V          G +   R+LSSDCY PL+EA AQA+ WE+AI+AY+EGFVVGR   E   V YRV+ECVLKACV   DG TALEVI RQAAEP  +Q +S   T+   G   E SGGPPDRRCWCLAAEALGRAGMI+EGH VL AMV+SG+P+REST+ DVPSLMPLP+  GG F+W   XXXXXXX              GLP    +   +E V+R+ +   S+R+D                 +V+ SK  ++G++  KGV+NGE C AAAVAAA     G ++ L +G LL +D   + S+++R+V+      L  K+RRMREFS  L  ++Q+  L            G  +  + + + D  + V  T    + LRPGGRRGRNEALTLR+ +R      GR  G     RG   +P
Sbjct:  514 KQAARTHMKTLEVVLSAVSEAGQFEVAMRLVQQMRAAGGTPSKKCYLYTLRAASKWGRWDVIESLMKDMRALRVGVVAEKETDAMDDGVVVNNGEGKGGGGEQHRPRMLSSDCYAPLVEAYAQASMWERAIEAYQEGFVVGREGGEAGPVKYRVFECVLKACVEVSDGRTALEVIGRQAAEPKALQKLSSAITTEGEGKGTELSGGPPDRRCWCLAAEALGRAGMIQEGHRVLMAMVDSGIPLRESTKTDVPSLMPLPTTGGGGFEWDXXXXXXXXXXXXXXXXXXXXXXPGLPPPAAMAEMQEAVVRERLGLFSSREDGTGGGSALTGGPRESRNAVQVSKSYLSGMEFPKGVVNGEGCTAAAVAAA---TNGGEKTLGMGWLLANDLASEKSEMERDVQEG---GLERKRRRMREFS--LKRREQQKKLERICTTGAGYRSGRLNGGLPVGKAD-DAGVGVTAG--LDLRPGGRRGRNEALTLRMRVR------GRRMGILRSFRGANDRP 1009          
BLAST of mRNA_H-elongata_contig1367.2588.1 vs. uniprot
Match: A0A6H5L7D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D9_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 1.420e-78
Identity = 193/405 (47.65%), Postives = 242/405 (59.75%), Query Frame = 0
Query:  138 VLSSDCYPPLIEACAQAAAWEKAIKAYREGFVVGRR--EVKTVNYRVYECVLKACVATRDGHTALEVIRRQAAEPGLVQAIS---TSSAIGDRDESSGGPPDRRCWCLAAEALGRAGMIKEGHGVLRAMVNSGMPVRESTRVDVPSLMPLPS-AEGGFDWHRRXXXXXXXPARNKR--------GLP--LYLTFRRETVIRQ---VIDSTRD-----DLVSEAGHAS---VESSKKRIAGLKLSKGVINGEACAAAAVAAAGGEREGRKRDLRLGRLLVSDWMDKNSKIKREVRSDVVVALGCKQRRMREFSETLALQKQESTLGEPSHCVDLFRR-----------DASSSVQSTEASPMHLRPGGRRGRNEALTLRIHMRRTPGVLGRENGSKSELRGVEGKP 504
            +LSSDCY PL+EA AQA+ WE+AI+AY+EGFVVGR   E   V YRVYECVLKACV   DG TALEVI RQAAEP  +Q +S   T+   G   E SGGPPDRRCWCLAAEALGRAGMI EGH VL AMV+SG+P+REST+ DVPSLMP+P+ A GGF+W++ XXXXXXX              GLP    +   +E V+R+   +  S  D       V+     S   V+ SK  ++G++  KGV+NGE C AAAVAAA   + G K  L +G LL +D   + S+++R V+      L  K+RRMREFS     Q+++      +   D   R           DA   V    A+ + LRPGGRRGRNEALTLR+ +R      G+  G     RG   +P
Sbjct:    1 MLSSDCYAPLVEAYAQASMWERAIEAYQEGFVVGREGGEAGPVKYRVYECVLKACVEVSDGRTALEVIGRQAAEPKALQKMSSTITTEGEGKGAELSGGPPDRRCWCLAAEALGRAGMINEGHRVLMAMVDSGIPLRESTKTDVPSLMPVPTTAGGGFEWNQXXXXXXXXXXXXXXXXXXXXXPGLPPPAAVAEMQEAVVRERLGLFSSWEDGRGGGSAVTGGPRESRNAVQVSKNYLSGVEFPKGVVNGEGCTAAAVAAA--TKSGEK-TLGMGWLLANDLTSEKSEMERGVQEG---GLERKRRRMREFSLKRREQQKKLQRIRTTGAGDRSGRINGGLPVGKADDAGVGV----AAGLDLRPGGRRGRNEALTLRMRVR------GKRMGILRSFRGANDRP 389          
BLAST of mRNA_H-elongata_contig1367.2588.1 vs. uniprot
Match: A0A6H5L472_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L472_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.300e-22
Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   27 IDEKTADDLALGARRANELDMKILEAVLGAVSDAGQFEVAIRLLQQMRTAGKIPTKACYLYALRAASKWGRWDVVESLMTEMRVLGVGVV 116
            +  K  + +A   ++A    MK LE VL AVS+AGQFEVA+RL+QQMR AG  P+K CYLY LRAASKWGRWDV+ESLM +MR L VGVV
Sbjct:  549 LKRKKVEAVAKAKKQAARTHMKTLEVVLSAVSEAGQFEVAMRLVQQMRAAGGTPSKKCYLYTLRAASKWGRWDVIESLMKDMRALRVGVV 638          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1367.2588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLV0_ECTSI1.290e-11148.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7D9_9PHAE1.420e-7847.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L472_9PHAE1.300e-2262.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 38..229
e-value: 5.2E-15
score: 57.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1367contigH-elongata_contig1367:8797..11937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1367.2588.1mRNA_H-elongata_contig1367.2588.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1367 8340..11973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1367.2588.1 ID=prot_H-elongata_contig1367.2588.1|Name=mRNA_H-elongata_contig1367.2588.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp
MVERQTTPARGVVSRQAERKRAAMVKIDEKTADDLALGARRANELDMKIL
EAVLGAVSDAGQFEVAIRLLQQMRTAGKIPTKACYLYALRAASKWGRWDV
VESLMTEMRVLGVGVVPPRAEGEEGESFVQGTRKASRVLSSDCYPPLIEA
CAQAAAWEKAIKAYREGFVVGRREVKTVNYRVYECVLKACVATRDGHTAL
EVIRRQAAEPGLVQAISTSSAIGDRDESSGGPPDRRCWCLAAEALGRAGM
IKEGHGVLRAMVNSGMPVRESTRVDVPSLMPLPSAEGGFDWHRRRRRRRR
RPARNKRGLPLYLTFRRETVIRQVIDSTRDDLVSEAGHASVESSKKRIAG
LKLSKGVINGEACAAAAVAAAGGEREGRKRDLRLGRLLVSDWMDKNSKIK
REVRSDVVVALGCKQRRMREFSETLALQKQESTLGEPSHCVDLFRRDASS
SVQSTEASPMHLRPGGRRGRNEALTLRIHMRRTPGVLGRENGSKSELRGV
EGKPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf