prot_H-elongata_contig103072.258.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103072.258.1
Unique Nameprot_H-elongata_contig103072.258.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: D7G036_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G036_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 4.970e-44
Identity = 60/92 (65.22%), Postives = 78/92 (84.78%), Query Frame = 0
Query:    1 MQEKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCPT 92
            MQ+KLTAPP+FDGPVRDRKCTD+ F L +I++W+ MT+VGI+S+Q+GDV +L+APTDYEGNLCG+D GYED    YY N  GSG+C ++CP+
Sbjct:    1 MQDKLTAPPEFDGPVRDRKCTDIIFTLAIIIMWITMTVVGISSVQQGDVRELLAPTDYEGNLCGFDDGYEDRGKLYYANNVGSGVCEKSCPS 92          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 6.660e-39
Identity = 61/92 (66.30%), Postives = 77/92 (83.70%), Query Frame = 0
Query:    1 MQEKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCPT 92
            MQ+KLTA P+FDGPVR+RKCTD+ F L +I++W+ MT VGI+SIQ+GDV +L+APTDYEGNLCG+D GYEDL   YY N  GSG+C+ TCP+
Sbjct:    4 MQDKLTASPEFDGPVRERKCTDIIFMLAIIIMWITMTAVGISSIQQGDVRELLAPTDYEGNLCGFDDGYEDLGKLYYANNVGSGVCVGTCPS 95          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A7S4J5U8_9STRA (Choline transporter-like protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5U8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.780e-25
Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    3 EKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSG---YEDLPFFYYVNYEGSGICIETCPT 92
            EKL APPDF GPV++R+CTDV  +LLL++ W AMT +G  ++  GD   ++ P DY+GN+CG + G    ED PF YYVN   +G+C++ CP+
Sbjct:    9 EKLQAPPDFSGPVQNRRCTDVLCSLLLVLTWAAMTGLGFYAVSNGDYRVIVYPMDYDGNICGTNYGNIDMEDYPFLYYVNSYSAGVCVKECPS 101          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A7S4R109_9STRA (Choline transporter-like protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R109_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.950e-23
Identity = 42/92 (45.65%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    4 KLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSG---YEDLPFFYYVNYEGSGICIETCPT 92
            KL AP DFDGP ++R+CTDVF +LLL++ W+AMT +G  ++  GD   ++ P DY+GN+CG D G     D  +FY++N    G+C++ CP+
Sbjct:   13 KLIAPADFDGPTKNRRCTDVFCSLLLVIAWIAMTGIGAYAVTNGDYRFVLFPIDYDGNICGTDFGDVDMTDFEYFYFINIFTGGVCVKECPS 104          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A7S3Y2F1_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2F1_HETAK)

HSP 1 Score: 101 bits (252), Expect = 3.960e-23
Identity = 40/89 (44.94%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    3 EKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCP 91
            E + A  DFDGPV++R+CTD+ +  LL+V+W+ MT++G  ++  GD+  ++ P DY+G  CG    YED P  YYV ++G+G+C+E+CP
Sbjct:   10 EPIQAGHDFDGPVKNRRCTDLLWLGLLLVVWICMTVIGKQAVDNGDIDLILHPVDYQGRSCGVGD-YEDKPDLYYVRFDGTGVCVESCP 97          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: B7FYN0_PHATC (Choline transporter-like protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYN0_PHATC)

HSP 1 Score: 101 bits (252), Expect = 4.010e-23
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    3 EKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYE--DLPFFYYVNYEGSGICIETCP 91
            +KL AP DFDGP +DR CTD+   L LI +WVAMT VGI ++  GD   ++ P DY+GN+CG D G +  + P+  YVN    G+C++ CP
Sbjct:    8 DKLVAPADFDGPTKDRHCTDILMLLALIAMWVAMTGVGIYAVTNGDYRLVLYPLDYDGNVCGTDFGLDMTEFPYLLYVNSYTGGVCVKECP 98          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A7S2HA85_9STRA (Choline transporter-like protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HA85_9STRA)

HSP 1 Score: 101 bits (252), Expect = 4.040e-23
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    3 EKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSG---YEDLPFFYYVNYEGSGICIETCP 91
            EKL AP DFDGP +DR CTD+F ++LL+ +W+AMT +G  +   GD   ++ P DY+GN+CG D G     D P+  YVN    G+C++ CP
Sbjct:   18 EKLVAPADFDGPTKDRHCTDIFCSILLLCMWIAMTGLGAYAATNGDFRVILYPLDYDGNICGTDYGSIDMNDYPYLVYVNIFSGGVCVKECP 109          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A6V1T854_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T854_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 1.840e-22
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   11 FDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCP 91
            F  P ++RKCTD  FALLLI  W AMT +G  S+Q+GD+T       Y+G++CG DSG EDLP+ YYV  + +G+C+E+CP
Sbjct:   14 FMSPEKNRKCTDFLFALLLIASWAAMTYLGYQSMQDGDITVFTTGMQYDGSVCGVDSGVEDLPYLYYVRTDLTGVCVESCP 94          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.300e-21
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    4 KLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCPT 92
            KL AP D +G   DR+CTDV F L+LI+ W+AMT +G+  I  G+   L+   DY+G +CG D G +D    YY+ ++G+G+C+E CPT
Sbjct:   17 KLAAPDDIEGGA-DRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPT 104          
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.100e-20
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    6 TAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVTKLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCPT 92
            TAP D +G   DR+CTDV F L+LI+ W+AMT +G+  I  G+   L+   DY+G +CG D G +D    YY+ ++G+G+C+E CPT
Sbjct:    3 TAPDDIEGGA-DRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPT 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103072.258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G036_ECTSI4.970e-4465.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW76_9PHAE6.660e-3966.30Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S4J5U8_9STRA2.780e-2549.46Choline transporter-like protein n=1 Tax=Odontella... [more]
A0A7S4R109_9STRA2.950e-2345.65Choline transporter-like protein n=2 Tax=Ditylum b... [more]
A0A7S3Y2F1_HETAK3.960e-2344.94Choline transporter-like protein n=1 Tax=Heterosig... [more]
B7FYN0_PHATC4.010e-2348.35Choline transporter-like protein n=2 Tax=Phaeodact... [more]
A0A7S2HA85_9STRA4.040e-2346.74Choline transporter-like protein n=1 Tax=Helicothe... [more]
A0A6V1T854_HETAK1.840e-2251.85Choline transporter-like protein n=1 Tax=Heterosig... [more]
D8LIJ7_ECTSI2.300e-2146.07Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L007_9PHAE1.100e-2045.98Choline transporter-like protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 9..80
NoneNo IPR availablePANTHERPTHR12385:SF34CHOLINE TRANSPORTER-LIKE PROTEIN 2coord: 9..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..92
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103072contigH-elongata_contig103072:1093..2222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103072.258.1mRNA_H-elongata_contig103072.258.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103072 1093..2222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103072.258.1 ID=prot_H-elongata_contig103072.258.1|Name=mRNA_H-elongata_contig103072.258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
MQEKLTAPPDFDGPVRDRKCTDVFFALLLIVLWVAMTIVGITSIQEGDVT
KLIAPTDYEGNLCGYDSGYEDLPFFYYVNYEGSGICIETCPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like