prot_H-elongata_contig103050.256.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103050.256.1
Unique Nameprot_H-elongata_contig103050.256.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 5.070e-14
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0
Query:   18 DPEIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            +P+IPFPFEPY VQKQLMRKIY TLE GG+GIFESPTGT
Sbjct:   20 EPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGT 58          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.130e-11
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    5 ILTDEVGKSDGGLD--PEIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            +L D    S+G +   P IPFPF PY VQ+QLM  +Y   ERGG+GIFESPTGT
Sbjct:    1 MLADAQQNSEGDMTFVPSIPFPFPPYEVQQQLMTHLYTAFERGGIGIFESPTGT 54          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: A0A7S0NLH8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NLH8_MICPS)

HSP 1 Score: 58.5 bits (140), Expect = 1.290e-8
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:   23 FPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            FPFEPY +Q  LMR +Y TLERGG+G+FESPTGT
Sbjct:   31 FPFEPYPIQLDLMRGLYRTLERGGIGVFESPTGT 64          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: UPI0018CFF1EB (ATP-dependent DNA helicase DDX11-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018CFF1EB)

HSP 1 Score: 58.5 bits (140), Expect = 1.360e-8
Identity = 23/37 (62.16%), Postives = 33/37 (89.19%), Query Frame = 0
Query:   20 EIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            E PFPF+PY +Q++ M+++Y+TLE+ G+GIFESPTGT
Sbjct:    5 EFPFPFKPYDIQQKFMKELYLTLEKRGLGIFESPTGT 41          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: A0A556U148_BAGYA (ATP-dependent DNA helicase DDX11 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556U148_BAGYA)

HSP 1 Score: 58.2 bits (139), Expect = 1.850e-8
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:   14 DGGLDPEIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            DG  +   PFPF PY +Q++ M  +YI LE+G VGIFESPTGT
Sbjct:    3 DGNGESRFPFPFNPYPIQERFMEALYIVLEQGKVGIFESPTGT 45          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: UPI000907367C (ATP-dependent DNA helicase DDX11 isoform X5 n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=UPI000907367C)

HSP 1 Score: 58.2 bits (139), Expect = 1.850e-8
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   10 VGKSDGGLDPEIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            VG  +GG+    PFPF PY +Q++ M  +Y  LE GGVGIFESPTGT
Sbjct:   55 VGAREGGV--RFPFPFAPYRIQEEFMAALYRALEAGGVGIFESPTGT 99          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: A0A5B8MRF8_9CHLO (DNA helicase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MRF8_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 1.860e-8
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0
Query:   23 FPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            FPFEPY VQK LMR +Y TLE GGVG+ ESPTGT
Sbjct:   14 FPFEPYDVQKDLMRAVYRTLEHGGVGVLESPTGT 47          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: A0A6P3X819_DINQU (probable ATP-dependent RNA helicase DDX11 isoform X1 n=2 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3X819_DINQU)

HSP 1 Score: 58.2 bits (139), Expect = 1.860e-8
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0
Query:   20 EIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            E PFPF PY +QKQ M+++Y  LE GG+G+FESPTGT
Sbjct:    6 EFPFPFPPYEIQKQFMKELYNCLESGGLGLFESPTGT 42          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: A0A151NIF8_ALLMI (Putative ATP-dependent RNA helicase DDX11 isoform B n=4 Tax=Alligator TaxID=8495 RepID=A0A151NIF8_ALLMI)

HSP 1 Score: 58.2 bits (139), Expect = 1.860e-8
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   10 VGKSDGGLDPEIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            VG  +GG+    PFPF PY +Q++ M  +Y  LE GGVGIFESPTGT
Sbjct:    9 VGAREGGV--RFPFPFAPYRIQEEFMAALYRALEAGGVGIFESPTGT 53          
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Match: UPI0009073E1F (ATP-dependent DNA helicase DDX11 isoform X1 n=4 Tax=Alligator mississippiensis TaxID=8496 RepID=UPI0009073E1F)

HSP 1 Score: 58.2 bits (139), Expect = 1.860e-8
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   10 VGKSDGGLDPEIPFPFEPYLVQKQLMRKIYITLERGGVGIFESPTGT 56
            VG  +GG+    PFPF PY +Q++ M  +Y  LE GGVGIFESPTGT
Sbjct:   55 VGAREGGV--RFPFPFAPYRIQEEFMAALYRALEAGGVGIFESPTGT 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103050.256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY7_ECTSI5.070e-1484.62Helicase ATP-binding domain-containing protein n=1... [more]
A0A835YWY4_9STRA9.130e-1157.41Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S0NLH8_MICPS1.290e-873.53Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
UPI0018CFF1EB1.360e-862.16ATP-dependent DNA helicase DDX11-like n=1 Tax=Plut... [more]
A0A556U148_BAGYA1.850e-858.14ATP-dependent DNA helicase DDX11 n=1 Tax=Bagarius ... [more]
UPI000907367C1.850e-857.45ATP-dependent DNA helicase DDX11 isoform X5 n=1 Ta... [more]
A0A5B8MRF8_9CHLO1.860e-876.47DNA helicase n=2 Tax=Chloropicon primus TaxID=1764... [more]
A0A6P3X819_DINQU1.860e-864.86probable ATP-dependent RNA helicase DDX11 isoform ... [more]
A0A151NIF8_ALLMI1.860e-857.45Putative ATP-dependent RNA helicase DDX11 isoform ... [more]
UPI0009073E1F1.860e-857.45ATP-dependent DNA helicase DDX11 isoform X1 n=4 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103050contigH-elongata_contig103050:1448..1615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103050.256.1mRNA_H-elongata_contig103050.256.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103050 1445..1615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103050.256.1 ID=prot_H-elongata_contig103050.256.1|Name=mRNA_H-elongata_contig103050.256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
MSLNILTDEVGKSDGGLDPEIPFPFEPYLVQKQLMRKIYITLERGGVGIF
ESPTGT
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