prot_H-elongata_contig13622.2559.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13622.2559.1
Unique Nameprot_H-elongata_contig13622.2559.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: A0A6H5KIQ9_9PHAE (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ9_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.940e-32
Identity = 66/112 (58.93%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    1 TSIGKWKGIERVSADPTRVINPKDRDHRGRYDDNGDQQPLLSGDVLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAACSPDMKAMLLSGITGTRG 112
            T IGKWKGIER  AD  R +  +             QQ +LSGDVLVFDRGQKCW+GPARSLR  LACG ED LSAV EPETC Y AVLETP ACS   +  L++G++G  G
Sbjct:  558 TLIGKWKGIERAEADDVRQLQQQH------------QQLILSGDVLVFDRGQKCWNGPARSLRVALACGTEDSLSAVTEPETCTYEAVLETPGACSSAQRDALIAGVSGGAG 657          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: D7G0Y2_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y2_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 3.160e-31
Identity = 65/112 (58.04%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    1 TSIGKWKGIERVSADPTRVINPKDRDHRGRYDDNGDQQPLLSGDVLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAACSPDMKAMLLSGITGTRG 112
            T IGKWKGIER  AD  R +  +             QQ +LSGDVLVFDRGQKCW+GPARSLR  LACG ED LSAV EPETC Y AVLETP ACS   +  L++ + G  G
Sbjct:  501 TLIGKWKGIERAKADDMRQLQQQH------------QQLVLSGDVLVFDRGQKCWNGPARSLRVALACGTEDSLSAVTEPETCTYEAVLETPGACSSAQRDALIASVAGGAG 600          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: A0A7S4DL14_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL14_HETAK)

HSP 1 Score: 73.6 bits (179), Expect = 3.730e-14
Identity = 38/94 (40.43%), Postives = 47/94 (50.00%), Query Frame = 0
Query:    2 SIGKWKGIERVSADPTRVINPKDRDHRGRYDDNGDQQPLLSGDVLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAAC 95
            ++G WKG   +                    D  D     S + L+F+ G KCW+GP RS+R  L C   D L +VEEPE CAY AVL TPAAC
Sbjct:   66 NLGNWKGFGEI--------------------DKPDNLHNYSEEGLLFEGGDKCWNGPQRSMRVLLVCSERDKLLSVEEPEVCAYRAVLATPAAC 139          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: K3X1Z1_GLOUD (Glucosidase 2 subunit beta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1Z1_GLOUD)

HSP 1 Score: 68.6 bits (166), Expect = 3.570e-11
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   33 DNGDQQPLLSGDVLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAACSPDMKA 101
            DNGD+        + F +GQKCW+GP RS++  LACG E+ + +V+EP TC Y  +L+TP AC+ D+ A
Sbjct:  545 DNGDKDYAR----MQFIKGQKCWNGPERSVQVRLACGQENEIVSVDEPSTCVYEMLLQTPLACTQDVLA 609          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: A0A7S0CNR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CNR4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.940e-10
Identity = 35/94 (37.23%), Postives = 43/94 (45.74%), Query Frame = 0
Query:    1 TSIGKWKGIERVSADPTRVINPKDRDHRGRYDDNGDQQPLLSGDVLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAA 94
            T++GKW G E+ +  P                             LVF  G KCW+GP RS   F  CGPE  L + +EPETC Y  V+ETP A
Sbjct:  117 TNLGKWHGFEQSNNRP----------------------------ALVFKDGDKCWNGPKRSAWIFPICGPETKLISADEPETCKYEFVMETPIA 182          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: A0A2R5GW61_9STRA (Glucosidase 2 subunit beta n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW61_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.960e-10
Identity = 38/95 (40.00%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    1 TSIGKWKGIERVSADPTRVINPKDRDHRGRYDDNGDQQPLLSGDVLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAAC 95
            TS+GK+KG    S+ P  V +P              + PL     L F  G KCW+GP RS+     CG E+ + +V+EP TCAY  V+ETP AC
Sbjct:  497 TSLGKFKGWS-SSSGPVCVEDPVTG-----------EMPLQGCASLSFADGAKCWNGPKRSVDVRFRCGIENEIISVDEPSTCAYAIVVETPFAC 579          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: A0A7S0NJN8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NJN8_MICPS)

HSP 1 Score: 60.8 bits (146), Expect = 4.580e-9
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   45 VLVFDRGQKCWHGPARSLRAFLACGPE-DVLSAVEEPETCAYTAVLETPAACSP 97
             +VFD G++CW+GPARS+   L CG   + L+  EEP  C Y A L TPAAC P
Sbjct:  104 TMVFDGGERCWNGPARSITVSLRCGGGGNRLADAEEPSRCEYAATLYTPAACDP 157          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: A0A6A6LUN3_HEVBR (Glucosidase 2 subunit beta n=5 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LUN3_HEVBR)

HSP 1 Score: 62.4 bits (150), Expect = 5.260e-9
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   45 VLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAAC 95
             ++F  G +CW+GPARSLR  L CG ++ L+ ++EP  C Y A L TPA C
Sbjct:  659 TMIFSNGDRCWNGPARSLRVKLRCGLKNELTDIDEPSRCEYVAFLSTPALC 709          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: C1EJ26_MICCC (Glucosidase 2 subunit beta n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EJ26_MICCC)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-8
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 0
Query:   35 GDQQPLLSGD--VLVFDRGQKCWHGPARSLRAFLACGPE-DVLSAVEEPETCAYTAVLETPAACSP 97
            G  QP+   D   +VF+ G++CW+GPARS+   L CG   + L+ VEEP  C Y A L TPAAC P
Sbjct:  400 GTMQPVDVKDPRTMVFNGGERCWNGPARSITVSLRCGGGGNKLADVEEPSRCEYAAKLYTPAACDP 465          
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Match: UPI000B76DE81 (glucosidase 2 subunit beta-like isoform X4 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76DE81)

HSP 1 Score: 61.2 bits (147), Expect = 1.300e-8
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   45 VLVFDRGQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAAC 95
             ++F  G +CW+GPARSL+  L CG ++ L+ ++EP  C Y A L TPA C
Sbjct:  471 TMIFSNGDRCWNGPARSLKVKLRCGLKNELTDIDEPSRCEYVAFLSTPALC 521          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13622.2559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5KIQ9_9PHAE1.940e-3258.93Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. ... [more]
D7G0Y2_ECTSI3.160e-3158.04Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A7S4DL14_HETAK3.730e-1440.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K3X1Z1_GLOUD3.570e-1146.38Glucosidase 2 subunit beta n=1 Tax=Globisporangium... [more]
A0A7S0CNR4_9STRA2.940e-1037.23Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A2R5GW61_9STRA7.960e-1040.00Glucosidase 2 subunit beta n=1 Tax=Hondaea ferment... [more]
A0A7S0NJN8_MICPS4.580e-951.85Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A6A6LUN3_HEVBR5.260e-949.02Glucosidase 2 subunit beta n=5 Tax=Hevea brasilien... [more]
C1EJ26_MICCC1.280e-848.48Glucosidase 2 subunit beta n=1 Tax=Micromonas comm... [more]
UPI000B76DE811.300e-847.06glucosidase 2 subunit beta-like isoform X4 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036607Glucosidase 2 subunit beta-likePFAMPF13015PRKCSH_1coord: 43..99
e-value: 1.5E-16
score: 60.4
IPR009011Mannose-6-phosphate receptor binding domain superfamilyGENE3D2.70.130.10coord: 1..96
e-value: 2.2E-13
score: 52.2
IPR039794Glucosidase II beta subunit-likePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 31..97
IPR026874Glucosidase 2 subunit betaPANTHERPTHR12630:SF1GLUCOSIDASE 2 SUBUNIT BETAcoord: 31..97
NoneNo IPR availableSUPERFAMILY50911Mannose 6-phosphate receptor domaincoord: 44..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13622contigH-elongata_contig13622:5920..6255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13622.2559.1mRNA_H-elongata_contig13622.2559.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13622 5920..6255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13622.2559.1 ID=prot_H-elongata_contig13622.2559.1|Name=mRNA_H-elongata_contig13622.2559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
TSIGKWKGIERVSADPTRVINPKDRDHRGRYDDNGDQQPLLSGDVLVFDR
GQKCWHGPARSLRAFLACGPEDVLSAVEEPETCAYTAVLETPAACSPDMK
AMLLSGITGTRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036607PRKCSH
IPR009011Man6P_isomerase_rcpt-bd_dom_sf
IPR039794Gtb1-like
IPR026874Glucosidase_2_bsu