prot_H-elongata_contig135846.2529.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135846.2529.1
Unique Nameprot_H-elongata_contig135846.2529.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
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BLAST of mRNA_H-elongata_contig135846.2529.1 vs. uniprot
Match: A0A6H5KTW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 6.320e-11
Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0 
Query:   71 YETRLRLLTLQGQWLEMEGRVMAERMTTTAGDGGRENTPSSDQAGAANSLGAAIASLEEAANLGNRLVSSPARVDATRGVPMTTSPLAECARTSGVVEAAGEATLRLAKLCEKLAIGD 188
            +ETRLRLLTLQGQWLE +G ++AE                     AA S  A++ASLE+A  LG+ L   P R   +     +    +    T G VEA GEA LRLAKLC+ ++ GD
Sbjct:   91 HETRLRLLTLQGQWLETKGHLLAENXXXXXXXXXX----------AAESFRASLASLEKATELGDSLTVRPPRSKLSPTPGSSDGNASGTTPTPGAVEATGEAMLRLAKLCDTMSAGD 198
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BLAST of mRNA_H-elongata_contig135846.2529.1 vs. uniprot
Match: D8LKP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP6_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.500e-10
Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0 
Query:   71 YETRLRLLTLQGQWLEMEGRVMAERMTTTAGDGGRENTPSSDQAGAANSLGAAIASLEEAANLGNRLVSSPARVDATRGVPMTTSPLAECARTSGVVEAAGEATLRLAKLCEKLAIGD 188
            +ETRLRLLTLQGQWLE +G ++AE                     AA S  A++ASLE+A  LG+ L   P     +     +T   +    T G VEA GEA LRLAKLC+ ++ GD
Sbjct:  987 HETRLRLLTLQGQWLETKGLLLAENXXXXXXXXXX----------AAESFCASLASLEKATELGDGLTVRPTGSKQSPTPGSSTGNASGTTPTPGAVEATGEAMLRLAKLCDAMSAGD 1094
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135846.2529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTW4_9PHAE6.320e-1141.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKP6_ECTSI2.500e-1041.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135846contigH-elongata_contig135846:277..1751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135846.2529.1mRNA_H-elongata_contig135846.2529.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135846 277..1753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135846.2529.1 ID=prot_H-elongata_contig135846.2529.1|Name=mRNA_H-elongata_contig135846.2529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
NRADALEKRAATTSGVLRLINGTTRQQHAAMLEAEARRVAVAAGGSGEGG
DSGDVESGGGWGWKSEGAGAYETRLRLLTLQGQWLEMEGRVMAERMTTTA
GDGGRENTPSSDQAGAANSLGAAIASLEEAANLGNRLVSSPARVDATRGV
PMTTSPLAECARTSGVVEAAGEATLRLAKLCEKLAIGDGFVDA
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