mRNA_H-elongata_contig135527.2513.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig135527.2513.1
Unique NamemRNA_H-elongata_contig135527.2513.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO)

HSP 1 Score: 387 bits (994), Expect = 9.380e-129
Identity = 188/251 (74.90%), Postives = 211/251 (84.06%), Query Frame = 1
Query:    1 QNGASTVTTQFVEEPLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNAGPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLN-IALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNG     T FV+EPLFIRNGRDLAAL+FNDVLYTEA RT+LIL    IL  AGPY +S RQEGFTT G SH +HAMAA SSSTRHAWYAKWQ HRVLRPEAYGGLLHFV   +++ + LP SI SNTELLN VES+NQAQNGGTNQVFLLPMAV EGSP HPAYPSGHA+NLGAY+TVLKAFLGFE GQRCFPSP +SNDAGTDRI + PS  DR+G C++++G++E GLTYEGELNKV +NV +GRSHL
Sbjct:  284 QNGGPPEDTLFVDEPLFIRNGRDLAALSFNDVLYTEAFRTILILFNESILAEAGPYGSSTRQEGFTTLGTSHYIHAMAAGSSSTRHAWYAKWQVHRVLRPEAYGGLLHFVINNLIDDVPLPASIVSNTELLNAVESLNQAQNGGTNQVFLLPMAVGEGSPVHPAYPSGHAINLGAYLTVLKAFLGFELGQRCFPSPMISNDAGTDRIPFVPSDGDRVGTCINEDGEEEVGLTYEGELNKVTSNVAIGRSHL 534          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: B7ZGM5_9PHAE (Putative vanadium-dependent bromoperoxidase 7 (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM5_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 2.550e-101
Identity = 158/253 (62.45%), Postives = 187/253 (73.91%), Query Frame = 1
Query:    1 QNGASTVTTQFVE--EPLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNA-GPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNG S V T+F++  EPLFIRNGRDLA L+FND LYTEA R  LIL    +L  + GPY  S+RQ+GFTTFG SHI+ AMA++SSSTRHAWY KWQ HRVLRPEAYGGLLH      +   LP SI  NT+LL+RVE+ N   N    + FLLPMA A+GSP HPAYPSGHA+NLG YIT LKAF+GFE GQ+CFP+P  S+D G  R+ Y P+ T+ L  CV  +G+   GLT EGELNKVA+NVI+GRSHL
Sbjct:   65 QNGDSDVVTEFIDPAEPLFIRNGRDLANLSFNDQLYTEAFRAALILFSESVLGGSIGPYAESLRQQGFTTFGESHILAAMASSSSSTRHAWYTKWQVHRVLRPEAYGGLLHNTLMKDVITPLPQSILGNTDLLSRVEANNMRMNPDGEKTFLLPMATAQGSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNPVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHL 317          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA)

HSP 1 Score: 315 bits (808), Expect = 1.970e-100
Identity = 162/252 (64.29%), Postives = 186/252 (73.81%), Query Frame = 1
Query:    1 QNGASTVTTQF-VEEPLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNA-GPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNGAS V T F  E P FIRNGRDLA ++F D+LYTEA R  LIL     L  + GPYE + RQ+GF TFGA HI+ AM +ASSSTRHAWY KWQ HR+LRPEAYGGL+H      +   LP SI  NTELLNRVE  NQ  NG   + FLLPMA A+GSP HPAYPSGHA+N+GAYIT LKAFLGFE GQRCFP P VSN+ GT+RI Y PS  + +G C++D G    GLTYEGELNKV+ANV++GRSHL
Sbjct:  316 QNGASDVDTTFDSENPRFIRNGRDLATISFRDLLYTEAFRAALILFTQGALGGSIGPYEEAERQQGFATFGAPHILTAMGSASSSTRHAWYQKWQVHRMLRPEAYGGLVHNTLMKNVITPLPDSILRNTELLNRVEVHNQKMNGDGEKTFLLPMASAQGSPTHPAYPSGHAINVGAYITSLKAFLGFEAGQRCFPDPVVSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHL 567          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA)

HSP 1 Score: 314 bits (804), Expect = 1.020e-99
Identity = 162/252 (64.29%), Postives = 187/252 (74.21%), Query Frame = 1
Query:    1 QNGASTVTTQFVEE-PLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNA-GPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNGAS V T   +E P FIRNGRDLA++AF D+LYTEA R  LIL     L  + GPYE + RQ+GF TFGA HI+ AM +ASSSTRHAWY KWQ HR+LRPEAYGGL+H      +   LP SI  NTELLNRVE  NQ  NG   + FLLPMA A+GSP HPAYPSGHA+N+GAYIT LKAFLGFE GQRCFP P VSN+ GT+RI Y PS  + +G C++D G    GLTYEGELNKV+ANV++GRSHL
Sbjct:  327 QNGASDVDTIIDKENPRFIRNGRDLASIAFRDLLYTEAFRAALILFTQGALGGSIGPYEEAERQQGFATFGAPHILTAMGSASSSTRHAWYQKWQVHRMLRPEAYGGLVHNTLMKNVITPLPDSILRNTELLNRVEVHNQKMNGDGEKTFLLPMASAQGSPTHPAYPSGHAINVGAYITSLKAFLGFEAGQRCFPDPVVSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHL 578          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 2.790e-98
Identity = 165/259 (63.71%), Postives = 190/259 (73.36%), Query Frame = 1
Query:    1 QNGASTVTTQFVEE--PLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNA-GPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGT-----NQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKV-SNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNGAS V T+FV+E  PLFIRNGRDLAALAF D+LYTEA R  L++    IL +A GPY TS RQ GF TFG  HI+ ++AA+SSSTRHAWYAKWQ HRVLRPEAYGGL+H    G L+  LP +I  NTELLNRV + N   NG       +  +LLPMAVAEGSP HPAYPSGHA+NLGAYIT LKAFLGFE GQRC+    V SND GT RI+Y P   +    C+  NG +  GLTYEGELNKVA+NVI+GRSH+
Sbjct:  281 QNGASKVKTEFVDEDKPLFIRNGRDLAALAFTDLLYTEAFRAALVMFRQGILSSAEGPYSTSERQVGFATFGEPHILTSLAASSSSTRHAWYAKWQVHRVLRPEAYGGLVHNTLTGRLHTPLPKAILQNTELLNRVRTHNAKCNGDGKGGHGDGTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLGDLVVSNDEGTKRIEYVPRKGE---TCIDQNGREVQGLTYEGELNKVASNVIIGRSHI 536          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 2.290e-96
Identity = 158/252 (62.70%), Postives = 183/252 (72.62%), Query Frame = 1
Query:    1 QNGASTVTTQFVEE-PLFIRNGRDLAALAFNDVLYTEALRTVLILL-ENKILDNAGPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNGAS + T F EE P FIRNGRDLA +A  D LYTEA R  LIL  E  +    GPY  + RQ+GF TFG  HI+ AMA+ASSSTRHAWYAKWQ HR+LRPEAYG L+H      +   LP SI  NTELLNRVE  NQ  N    + FLLPMA A+GSP HPAYPSGHA+N GAYIT LKAFLG+E GQ+CFP+P VSND GT RI Y+PS  + +G CV++ G    GLTYEGELNK++ANV+LGRSH+
Sbjct:  317 QNGASKLETTFDEENPRFIRNGRDLATIALRDQLYTEAFRAALILFTEGALGGEVGPYAEAERQQGFATFGEPHILTAMASASSSTRHAWYAKWQVHRMLRPEAYGALVHNTLMRDVITPLPDSILRNTELLNRVEVHNQRMNPDGEKTFLLPMAAAQGSPTHPAYPSGHAINNGAYITALKAFLGYEAGQKCFPNPVVSNDEGTKRIKYKPSGREIVGECVNEKGKLVEGLTYEGELNKISANVLLGRSHI 568          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.060e-95
Identity = 155/253 (61.26%), Postives = 185/253 (73.12%), Query Frame = 1
Query:    1 QNGASTVTTQFVE--EPLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNA-GPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL 750
            QNG S V T+F++  EPLFIRNGRDLA L+FND LYTEA R  LIL    +L  + GPY  S+RQ+GFTTFG SHI+ AMA++SSSTRHAWY KWQ HRVLRP+AYGGLLH      +   LP SI  NT+LL+RV + N   N    + FLLPMA A+GSP HPAYPSGHA+NLG YIT LKAF+GFE GQ+CFP+   S+D G  R+ Y P+ T+ L  CV  +G+   GLT EGELNKVA+NVI+GRSHL
Sbjct:  282 QNGDSDVVTEFIDPAEPLFIRNGRDLANLSFNDQLYTEAFRAALILFSESVLGGSIGPYAESLRQQGFTTFGESHILAAMASSSSSTRHAWYTKWQVHRVLRPQAYGGLLHNTLMKDVITPLPQSILGNTDLLSRVAANNIRMNPDGEKTFLLPMATAQGSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNLVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHL 534          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 7.950e-54
Identity = 106/238 (44.54%), Postives = 135/238 (56.72%), Query Frame = 1
Query:   49 FIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNAG---PYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGT---NQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRS 744
            +IRN RDL+ L   D + TEA R  LILLE   +   G   PY  S RQ GF  +G SH++  +  A  S + AWY KW  H  +RPEA+GG +H V  G LN+ +  S+  NTELL RV   N   NG     ++ +LL  AV EGSP HP+YP+GHA   GA+ TVLKA +G ERG  CF  PKV +D G   +D+        G C          LT+EGE+NK+A NV  GR+
Sbjct:  319 YIRNSRDLSRLVAADTVNTEAYRAALILLEQGAISGPGSNGPYAGSSRQAGFVNYGVSHLMRLVGTAELSQKSAWYQKWNVHMFVRPEAFGGTIHNVLLGKLNVDINPSLLKNTELLERVAERNGVINGRPGVLDRTYLLSQAVIEGSPTHPSYPAGHATQNGAFATVLKALVGLERGSDCFRDPKVPDDEGLTLLDF-------TGDC----------LTFEGEINKLAVNVAFGRN 539          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA)

HSP 1 Score: 189 bits (480), Expect = 1.950e-52
Identity = 107/252 (42.46%), Postives = 140/252 (55.56%), Query Frame = 1
Query:    1 QNGASTVTTQFVEE-PLFIRNGRDLAALAFNDVLYTEALRTVLILLENKILDNAG---PYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRS 744
            QNG   V  + ++  P +IRNGRDL+ +A  D + TEA R+ LIL+E   +   G   PY    RQ GF  +G SH +  + +   S R +WY KW  H   RPEA GG +H V  G L+I    SI +N EL ++VE+ N  +  G    FLLP  V EGSP HP+YPSGHAV  GA+ T+LKA +G ERG  CF  P V +D G   + +                  +  LT+EGE+NK AANV LGR+
Sbjct:  295 QNGEFPVEPEILDPVPRYIRNGRDLSTMAATDTINTEAYRSALILIEQDAISRFGINGPYVADGRQSGFVNYGISHTMRLVGSGELSMRSSWYQKWNVHLYARPEAIGGTIHNVLNGDLDITFADSIINNDELFSKVEARNM-EITGIPSTFLLPQTVREGSPTHPSYPSGHAVQNGAFSTILKALVGLERGLECFNDPVVPSDDGLTLLPF------------------DGCLTFEGEINKYAANVALGRN 527          
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.020e-49
Identity = 108/265 (40.75%), Postives = 146/265 (55.09%), Query Frame = 1
Query:    1 QNGASTVT-TQFVEEPLFIRNGRDLAALAFNDVLYTEALRTVLILLE------NKILDNA----GPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRPEAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGT---NQVFLLPMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQPSPTDRLGVCVSDNGDDEAG-LTYEGELNKVAANVILGRSHL 750
            QNG S  +     +E  +IRN RDL+ L   D + TEA R  LILL+       +   +A    GPY  S RQ GF  +G SH++  +  A  + + AWY KW  H  +RPEA+GG +H V  G L++ +  S+  NT+LL+RV + N   NG     ++ +LL  A+ EGSP HP+YP+GHA   GA+ TVLKA +G ERG  CF  P   +D G   + Y               GDD    LT+EGE+NK+A NV LGR+ L
Sbjct:  302 QNGGSPDSEADLDDEDRYIRNSRDLSRLVATDTVNTEAYRAALILLDPDQGADGRAAISAPGLNGPYADSSRQAGFVNYGVSHLMRLVGTAELAQKSAWYQKWNVHMFVRPEAFGGSIHNVLLGKLDVEIAPSLLKNTDLLDRVAARNGEINGRPGVLDRTYLLSQALPEGSPTHPSYPAGHATQNGAFATVLKALVGLERGSVCFNDPVFPDDEGLTLLPY--------------TGDDGNNCLTFEGEINKLAVNVALGRNML 552          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135527.2513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K7ZUA3_ASCNO9.380e-12974.90Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascop... [more]
B7ZGM5_9PHAE2.550e-10162.45Putative vanadium-dependent bromoperoxidase 7 (Fra... [more]
A0A3G3BM34_SACJA1.970e-10064.29Vanadium-dependent bromine peroxidase n=1 Tax=Sacc... [more]
A0A411NJW8_SACJA1.020e-9964.29Vanadium-dependent bromoperoxidase (Fragment) n=3 ... [more]
D8LTP5_ECTSI2.790e-9863.71Vanadium-dependent bromoperoxidase n=2 Tax=Ectocar... [more]
Q7X9V0_9PHAE2.290e-9662.70Vanadium-dependent bromoperoxidase 2 n=2 Tax=Lamin... [more]
B7ZGM1_9PHAE2.060e-9561.26Putative vanadium-dependent bromoperoxidase 3 n=4 ... [more]
B7ZGM6_9PHAE7.950e-5444.54Putative vanadium-dependent iodoperoxidase 3 n=1 T... [more]
A0A3G3BM28_SACJA1.950e-5242.46Vanadium-dependent iodine peroxidase n=1 Tax=Sacch... [more]
Q4LDE6_9PHAE1.020e-4940.75Vanadium-dependent iodoperoxidase 1 n=1 Tax=Lamina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135527contigH-elongata_contig135527:12..1776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.4
Seed ortholog evalue1.9e-82
Seed eggNOG ortholog2880.D8LTP5
EggNOG OGs2EKT6@1,2SQKZ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size751
Cds size750
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135527.2513.1prot_H-elongata_contig135527.2513.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig135527 12..1775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929804.787968-CDS-H-elongata_contig135527:11..2841622929804.787968-CDS-H-elongata_contig135527:11..284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 12..284 +
1691679164.0761464-CDS-H-elongata_contig135527:11..2841691679164.0761464-CDS-H-elongata_contig135527:11..284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 12..284 +
1622929804.8029704-CDS-H-elongata_contig135527:546..6541622929804.8029704-CDS-H-elongata_contig135527:546..654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 547..654 +
1691679164.0857477-CDS-H-elongata_contig135527:546..6541691679164.0857477-CDS-H-elongata_contig135527:546..654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 547..654 +
1622929804.8163948-CDS-H-elongata_contig135527:887..10461622929804.8163948-CDS-H-elongata_contig135527:887..1046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 888..1046 +
1691679164.0935783-CDS-H-elongata_contig135527:887..10461691679164.0935783-CDS-H-elongata_contig135527:887..1046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 888..1046 +
1622929804.8338006-CDS-H-elongata_contig135527:1320..14941622929804.8338006-CDS-H-elongata_contig135527:1320..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 1321..1494 +
1691679164.102046-CDS-H-elongata_contig135527:1320..14941691679164.102046-CDS-H-elongata_contig135527:1320..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 1321..1494 +
1622929804.849708-CDS-H-elongata_contig135527:1739..17751622929804.849708-CDS-H-elongata_contig135527:1739..1775Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 1740..1775 +
1691679164.110682-CDS-H-elongata_contig135527:1739..17751691679164.110682-CDS-H-elongata_contig135527:1739..1775Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig135527 1740..1775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig135527.2513.1

>prot_H-elongata_contig135527.2513.1 ID=prot_H-elongata_contig135527.2513.1|Name=mRNA_H-elongata_contig135527.2513.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
QNGASTVTTQFVEEPLFIRNGRDLAALAFNDVLYTEALRTVLILLENKIL
DNAGPYETSMRQEGFTTFGASHIVHAMAAASSSTRHAWYAKWQAHRVLRP
EAYGGLLHFVRAGMLNIALPTSIASNTELLNRVESINQAQNGGTNQVFLL
PMAVAEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSND
AGTDRIDYQPSPTDRLGVCVSDNGDDEAGLTYEGELNKVAANVILGRSHL
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mRNA from alignment at H-elongata_contig135527:12..1776+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig135527.2513.1 ID=mRNA_H-elongata_contig135527.2513.1|Name=mRNA_H-elongata_contig135527.2513.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1765bp|location=Sequence derived from alignment at H-elongata_contig135527:12..1776+ (Himanthalia elongata Himel1 dioecious)
CAGAACGGTGCGTCGACTGTGACAACCCAATTCGTAGAGGAGCCGCTCTT CATCCGCAACGGACGTGACCTGGCCGCTCTCGCCTTCAATGATGTCCTGT ACACCGAAGCCCTCCGCACGGTTCTCATCTTGCTCGAGAACAAAATCCTC GATAACGCCGGTCCTTACGAGACCTCAATGCGCCAGGAAGGTTTTACGAC CTTCGGGGCATCACATATCGTTCATGCCATGGCCGCCGCAAGCTCCTCCA CCCGCCACGCTTGGTACGCAAAGGTGGGCAGGGATCACGTACATTCGGAA GATGACCAGTCCCAAAGATCGTCCGATGACCAACAAGGGTCGAGTATGCT ACCGGTGTTATCATTTTCAATCCTTACAATATGCTGCCAGAGGATCGAGT CTTCCTCGCCAGGAACGAGTCAAGCGTTTCTTTAAGCTCGACTCTTGTCT GAGAGCATTCCCCTTCCCTCACCCCTGGATGTGTGGGATTTTTTCTCTGA CCCAATCCATTCAACGCCCTGCACTTGCTCGGCAGTGGCAAGCTCACCGT GTTCTTAGGCCCGAGGCTTACGGGGGTCTTCTGCACTTCGTGCGCGCAGG AATGCTGAACATCGCGCTTCCCACGTCGATCGCCAGCAATACGGTATGCC CCACTATCGACCCACTGTTCACTTTTGATGGCGGATCAAATGATTTGTCA TTACGCGTTACATCATCCGTGGGACGTTAGGGGTGAATAGGAAAGAACGC AGGCCATTAACCCCAGCCATATTCCCTGCCGATATTTAGTTATCTTTTAC TTCGTCGGAGAATTTAATACATACACATCGATCATCTATTTATGCTCGGA TCGCGGACTGCTGTGGGATTGCTCAGGAGCTCCTCAACCGAGTGGAGAGT ATCAACCAGGCACAGAACGGTGGTACCAATCAGGTCTTCCTCCTCCCGAT GGCTGTCGCTGAAGGTTCGCCCGCGCACCCCGCATACCCCAGCGGACACG CTGTCAATCTCGGTGCTTACATCACTGTGCTCAAGGTAAGAATACCGATC CCGGTTTCCCAAATAAATAGCTCGATATCTGTTTGATGAGCCCCTTCCTT GTATATGACCTGCAGTCGTGAATTGCTAGCCTCGTTCCGTTATTCCACAG CGATCGCATCCCAACGAGCTAGCTCGCCTTGGAACTTTGAAACATCTTTG GCCCGCGCTCAGAGTACGGCTTGTCAGAAAGAAAAACAAGAAACAGCCGC CAATGTTACTATTTGATCATTCCCCCGACTTTTGTTGGTATTTTGCTCCA TATTACAAGGCTTTCCTCGGCTTCGAGCGCGGGCAGAGGTGCTTCCCTTC GCCAAAGGTCTCAAATGACGCTGGTACGGATCGCATCGATTACCAACCAT CTCCAACGGATCGCTTGGGGGTCTGCGTGAGCGATAACGGGGACGACGAG GCTGGGCTCACGTACGAGGGCGAGCTTAACAAAGTAAGTCGATATATCCG GATCATATTGTCGGGCGCTATTCAATCAGCTGGCATGATTCATCCGTATT CCTTTCGCCTTGGGATGGCAAAGGACACCTTTAACTTTGAGATCGTACTA TTCTTTCTATATCGACGCTGAAAATGAATTATTTTCATGTTGCGTAAATT GACAACGGTGTTGAACGTGGAAGCGCTCTGATTTGCGGCGAATATTCCAC ACACCACCCCTATTTCAACTGTGGCCAGGTGGCCGCGAACGTCATCTTGG GCCGATCGCATCTCG
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Coding sequence (CDS) from alignment at H-elongata_contig135527:12..1776+

>mRNA_H-elongata_contig135527.2513.1 ID=mRNA_H-elongata_contig135527.2513.1|Name=mRNA_H-elongata_contig135527.2513.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig135527:12..1776+ (Himanthalia elongata Himel1 dioecious)
CAGAACGGTGCGTCGACTGTGACAACCCAATTCGTAGAGGAGCCGCTCTT
CATCCGCAACGGACGTGACCTGGCCGCTCTCGCCTTCAATGATGTCCTGT
ACACCGAAGCCCTCCGCACGGTTCTCATCTTGCTCGAGAACAAAATCCTC
GATAACGCCGGTCCTTACGAGACCTCAATGCGCCAGGAAGGTTTTACGAC
CTTCGGGGCATCACATATCGTTCATGCCATGGCCGCCGCAAGCTCCTCCA
CCCGCCACGCTTGGTACGCAAAGCAGAACGGTGCGTCGACTGTGACAACC
CAATTCGTAGAGGAGCCGCTCTTCATCCGCAACGGACGTGACCTGGCCGC
TCTCGCCTTCAATGATGTCCTGTACACCGAAGCCCTCCGCACGGTTCTCA
TCTTGCTCGAGAACAAAATCCTCGATAACGCCGGTCCTTACGAGACCTCA
ATGCGCCAGGAAGGTTTTACGACCTTCGGGGCATCACATATCGTTCATGC
CATGGCCGCCGCAAGCTCCTCCACCCGCCACGCTTGGTACGCAAAGTGGC
AAGCTCACCGTGTTCTTAGGCCCGAGGCTTACGGGGGTCTTCTGCACTTC
GTGCGCGCAGGAATGCTGAACATCGCGCTTCCCACGTCGATCGCCAGCAA
TACGTGGCAAGCTCACCGTGTTCTTAGGCCCGAGGCTTACGGGGGTCTTC
TGCACTTCGTGCGCGCAGGAATGCTGAACATCGCGCTTCCCACGTCGATC
GCCAGCAATACGGAGCTCCTCAACCGAGTGGAGAGTATCAACCAGGCACA
GAACGGTGGTACCAATCAGGTCTTCCTCCTCCCGATGGCTGTCGCTGAAG
GTTCGCCCGCGCACCCCGCATACCCCAGCGGACACGCTGTCAATCTCGGT
GCTTACATCACTGTGCTCAAGGAGCTCCTCAACCGAGTGGAGAGTATCAA
CCAGGCACAGAACGGTGGTACCAATCAGGTCTTCCTCCTCCCGATGGCTG
TCGCTGAAGGTTCGCCCGCGCACCCCGCATACCCCAGCGGACACGCTGTC
AATCTCGGTGCTTACATCACTGTGCTCAAGGCTTTCCTCGGCTTCGAGCG
CGGGCAGAGGTGCTTCCCTTCGCCAAAGGTCTCAAATGACGCTGGTACGG
ATCGCATCGATTACCAACCATCTCCAACGGATCGCTTGGGGGTCTGCGTG
AGCGATAACGGGGACGACGAGGCTGGGCTCACGTACGAGGGCGAGCTTAA
CAAAGCTTTCCTCGGCTTCGAGCGCGGGCAGAGGTGCTTCCCTTCGCCAA
AGGTCTCAAATGACGCTGGTACGGATCGCATCGATTACCAACCATCTCCA
ACGGATCGCTTGGGGGTCTGCGTGAGCGATAACGGGGACGACGAGGCTGG
GCTCACGTACGAGGGCGAGCTTAACAAAGTGGCCGCGAACGTCATCTTGG
GCCGATCGCATCTCGTGGCCGCGAACGTCATCTTGGGCCGATCGCATCTC
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