mRNA_H-elongata_contig135447.2505.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: D8LFI2_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI2_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.920e-72 Identity = 117/164 (71.34%), Postives = 137/164 (83.54%), Query Frame = 1
Query: 22 GAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQLMDLTLVPEE 513
GA++LGV SD+YGRR FL+AT+LVV+FGL T A SFWWLL FR +VGVGAGGMEVPFDLL E++ + K RIL+ VQV WA GSLFVG AWAVLSFG+SWR LAL+SA+PPLTVL CFSFIPESPRWL+A+GR +EAK VLRKIA NGI+L +T+VPEE
Sbjct: 83 GAIVLGVFSDVYGRRPAFLVATLLVVLFGLSTTFATSFWWLLLFRSLVGVGAGGMEVPFDLLGELITHREKSRILVDVQVMWAMGSLFVGFAAWAVLSFGHSWRLLALVSAVPPLTVLFCFSFIPESPRWLIANGRVQEAKEVLRKIANKNGIELTAITIVPEE 246
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A6H5JGP7_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP7_9PHAE) HSP 1 Score: 227 bits (579), Expect = 1.010e-67 Identity = 112/166 (67.47%), Postives = 134/166 (80.72%), Query Frame = 1
Query: 16 QAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQLMDLTLVPEE 513
+ GA++LGV SD+YGRR FL+AT+LVV+FGL T A SFWWLL FR +VGVGAGGM VPFDLL E++ + K RIL+ VQV WA GSLFVG AWAVL FG+SWR LAL+SA+P LTVL CFSFIPESPRWL+A+GR +EA+ VLRKIAG NGI+ +T+ PEE
Sbjct: 288 RVGAIVLGVFSDLYGRRPAFLVATLLVVLFGLSTTFATSFWWLLLFRSLVGVGAGGMGVPFDLLGELITHREKSRILVDVQVMWAMGSLFVGFAAWAVLFFGHSWRLLALVSAVPSLTVLFCFSFIPESPRWLIANGRVQEAEEVLRKIAGKNGIEFTTITIAPEE 453
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A3D1JEE6_9CHLR (Arabinose efflux permease n=2 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A3D1JEE6_9CHLR) HSP 1 Score: 129 bits (325), Expect = 1.520e-32 Identity = 66/170 (38.82%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 1 IYINLQAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGG-MEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQLMDLTLVP 507
I++ + AGA + G +SD+ GR++GF+ + +FGL + APSF WL+A R + G G GG + V + + +E +P + + R L+ ++ WA G++F +AW ++ WRWL +SA+P L + +IPESPR+LM G+ ++A VLR++A NG L D TL P
Sbjct: 66 IFLGMLAGAWLWGRLSDLIGRKIGFISTVAIDSIFGLASAFAPSFGWLVALRALTGFGVGGTLPVDYSIFAEYLPAEKRGRYLVLLEAFWALGAVFAAGLAWLIVPH-LGWRWLLGISAIPGLIIFFIRRYIPESPRYLMISGKPEQATAVLRQVAAENGRTLADFTLAP 234
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A9V5I0_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5I0_MONBE) HSP 1 Score: 127 bits (319), Expect = 2.890e-31 Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 22 GAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNG 477
GA+I G ++D YGR+ + LV + G+ + AP+F L+A R VG+G GGM VPFD+L+E +P +++ + LMG++ W G+LFV +AWA+LS WR L L ++P + +L F F+PESP WL+ GR ++A VLR+ NG
Sbjct: 103 GALIFGPMADRYGRKAATFASAALVAIAGVASAFAPNFEVLVALRAFVGLGIGGMAVPFDILAEFMPSEYRGKALMGIEFFWTFGTLFVNGLAWAMLS-AEGWRLLVGLCSVPVVLAMLSFPFMPESPHWLLTVGRSEDAVVVLRRAGELNG 253
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A2K1LA88_PHYPA (MFS domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA88_PHYPA) HSP 1 Score: 125 bits (313), Expect = 2.180e-30 Identity = 68/162 (41.98%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 1 IYINLQAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQL 486
+++ + GA I G+VSD+ GRR+GFL V FGL++ +P++W+LL R +VG G GG V F L E +P + L+ + V W GS+ L+AW +L +SWR L +SALP L +L+ +S++PESPR+LM G + A+ VLR++A NG L
Sbjct: 103 VFVGIFVGAYIWGLVSDIKGRRVGFLATAVFTFFFGLLSAWSPTYWFLLLARTLVGFGLGGSSVIFSLCMEFLPASSRGFWLVFLNVLWTVGSVSSALLAWVILP-NHSWRILVAVSALPFLLLLVFYSWVPESPRYLMVKGDIEGAREVLRQVAYINGRSL 263
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A1Y1IFI0_KLENI (Transporter family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFI0_KLENI) HSP 1 Score: 121 bits (303), Expect = 6.580e-29 Identity = 63/158 (39.87%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 1 IYINLQAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTN 474
+++ + G+ G+VSD +GRR+GF V +VFGL++ +P++W+LL R +VG G GG V F L E +P + L+ V+ W GS+ L+AW V+ WRWL SA P L +L+ + +PESPR+LM GREK + VL+++A N
Sbjct: 108 VFLGVFLGSNCWGIVSDEWGRRVGFFATAVFTLVFGLLSAVSPAYWFLLVSRALVGFGLGGGSVIFSLFMEFIPSSRRGFWLVCVEFFWTIGSVAQALLAWIVMPT-LQWRWLVAFSATPFLLLLIFYPVLPESPRYLMVKGREKSSLAVLQRMAVRN 264
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A2P2QLF7_RHIMU (Uncharacterized protein MANES_14G000300 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2QLF7_RHIMU) HSP 1 Score: 115 bits (288), Expect = 8.910e-28 Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 1 IYINLQAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQL 486
++ + GA G VSD++GRR GFL+ ++ GL++ AAPS+ LL RG VG+G GG V E VP +++ ++ W G++F +AW V+ WRWL LSALP +L+ +S PESPR+L GR+ +A +L K+A NG +L
Sbjct: 69 VFAGMLVGAYSWGTVSDLFGRRKGFLVTAIITSSAGLLSAAAPSYTVLLIARGFVGLGLGGGPVLLSWFLEYVPAQNRGTWMVIFSAFWTIGTIFEAALAWIVMP-RLGWRWLLGLSALPSFLLLMFYSITPESPRYLCLKGRKNDAHRILEKVAELNGKKL 229
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A819U8V2_9BILA (Hypothetical protein n=6 Tax=Rotaria TaxID=231623 RepID=A0A819U8V2_9BILA) HSP 1 Score: 117 bits (294), Expect = 1.270e-27 Identity = 59/158 (37.34%), Postives = 98/158 (62.03%), Query Frame = 1
Query: 1 IYINLQAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTN 474
++ + GA + G+++D YGRR ++ +L +FGL+T AP+++W+L R +VG G L+ E +P + I++ +++ W+ GS+F LMA ++ Y WR L +LSALP V C F+PESPR+ +A GR+++A++VL+ IA TN
Sbjct: 76 VFAGMMCGAFLFGILADKYGRRRVIFLSAILNTIFGLLTAFAPNYYWMLLARTLVGFALSGAAQGSTLMLEYLPSSTRATIIIVIELFWSLGSIFEYLMAMFIVPI-YGWRVLTILSALPISVVAFCMYFVPESPRYYVASGRQEKAEDVLKTIALTN 232
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: A0A7S3UUM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUM5_HETAK) HSP 1 Score: 115 bits (287), Expect = 6.970e-27 Identity = 65/169 (38.46%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 1 IYINLQAGAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQLMDLTLVP 507
+++ GA G ++D+ GRR + I+ V + VFG+ T A ++ +LAFRG+VG G GG VPFD L+E+ P + + + + W GS+ AW +L Y WR LAL+ A P + +L + + ESPRWL+A GRE EA+ L A NG L + L P
Sbjct: 97 VFVGETIGAFFFGELADLKGRRYSYAISLVFMAVFGVATYFAGNYAEVLAFRGLVGFGVGGCCVPFDYLAEVAPPAWRGKACLCSSLWWGFGSVLTTGSAWLLLD-AYGWRVLALVCAAPVVLAMLALATLHESPRWLLAQGREPEARAALIAGARLNGKDLGEFRLAP 264
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Match: UPI0015885EB9 (organic cation/carnitine transporter 7-like isoform X3 n=1 Tax=Populus alba TaxID=43335 RepID=UPI0015885EB9) HSP 1 Score: 114 bits (285), Expect = 8.300e-27 Identity = 67/163 (41.10%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 22 GAMILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAGGMEVPFDLLSEIVPRKHKRRILMGVQVTWAGGSLFVGLMAWAVLSFGYSWRWLALLSALPPLTVLLCFSFIPESPRWLMAHGREKEAKNVLRKIAGTNGIQLMDLTLVPE 510
G+ G+VSD +GRR GFL AT+L GL++ +P++ +L+ R +VG G GG V E VP H+ + ++ + WA GS+F +AW V+ WRWL S LP +LL +S +PESPR+L GR +A N+L KIA N QL LVP+
Sbjct: 86 GSFFWGLVSDHHGRRKGFLGATLLTCGAGLLSAFSPNYAYLVILRCLVGSGLGGGSVFSSWFLEFVPASHRGKRMLLLSWFWAFGSIFEAFLAWMVMP-RLGWRWLLAASCLPAFALLLFYSHVPESPRYLCMKGRINDAYNILEKIALLNQSQLPPGELVPD 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135447.2505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig135447.2505.1 >prot_H-elongata_contig135447.2505.1 ID=prot_H-elongata_contig135447.2505.1|Name=mRNA_H-elongata_contig135447.2505.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp MILGVVSDMYGRRLGFLIATVLVVVFGLMTVAAPSFWWLLAFRGMVGVGAback to top mRNA from alignment at H-elongata_contig135447:174..930- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig135447.2505.1 ID=mRNA_H-elongata_contig135447.2505.1|Name=mRNA_H-elongata_contig135447.2505.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=757bp|location=Sequence derived from alignment at H-elongata_contig135447:174..930- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig135447:174..930- >mRNA_H-elongata_contig135447.2505.1 ID=mRNA_H-elongata_contig135447.2505.1|Name=mRNA_H-elongata_contig135447.2505.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=972bp|location=Sequence derived from alignment at H-elongata_contig135447:174..930- (Himanthalia elongata Himel1 dioecious)back to top |