prot_H-elongata_contig13539.2504.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13539.2504.1
Unique Nameprot_H-elongata_contig13539.2504.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length243
Homology
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: D7G6U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U7_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 6.850e-73
Identity = 131/242 (54.13%), Postives = 172/242 (71.07%), Query Frame = 0
Query:    3 SKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQ-TGNGPSVILEGGLADVSVALAKLTYTS 243
            SKT+Q+IV A+ND P + G   + AEEDT + V G++V+DPDCDD PRG++E+ + ASNGT+Q  GSVA LYLMEA  G+LK+RGKTGPVNAALAGL Y G AE+SG D +V T DDLG+SG G  L +S+S+++ V+  NDPPLI  P EL++  GGVLF +ED+ +PLG FGV+D D+ F+R  +S   G+VG   I+ +  ++ + ST E  T  G SV  EG   +VS AL  LTYTS
Sbjct:  986 SKTIQIIVDAINDGPSLTGPLAIEAEEDTSITVNGVAVQDPDCDDAPRGVLEITVAASNGTVQFIGSVAGLYLMEALPGSLKVRGKTGPVNAALAGLSYEGVAEFSGTDKIVVTADDLGHSGTGSQLSASWSIDVLVSASNDPPLIQAPPELDLIVGGVLFVVEDESSPLGVFGVSDIDDPFLRVTVSARVGNVGYGGIE-EVGMVAVASTDETPTATGSSVSFEGTADEVSDALGSLTYTS 1226          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A6H5KBW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW5_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 1.510e-71
Identity = 126/241 (52.28%), Postives = 165/241 (68.46%), Query Frame = 0
Query:    3 SKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTYTS 243
            +KT+++IV A+ND P + G   +  EEDTP+ V G++V+DPDCDD PRG++E+ + ASNGT+Q  GSVA LYLMEA  G+LK+RGKTGPVNAALAGL Y G AE+SG D +V T DDLG+SG G  L +S+S+ + V+  NDPPLI  P EL++  GGVLF +ED+ +PLG FGV+D D+ F+R  +S   G+VG   I+    + V          G SV  EG   +VS AL  LTYTS
Sbjct: 1010 TKTIEIIVDAINDGPSLIGPLAIEVEEDTPITVNGVAVQDPDCDDAPRGVLEITVAASNGTVQFIGSVAGLYLMEALPGSLKVRGKTGPVNAALAGLSYEGVAEFSGTDRIVVTADDLGHSGTGSQLSASWSIEVLVSASNDPPLIQAPPELDLIAGGVLFVVEDESSPLGVFGVSDMDDPFLRVTVSARVGNVGYGGIEEVGMVAVASRDETPPATGSSVSFEGTADEVSDALGSLTYTS 1250          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI0019BDBD8B (Pre-peptidase C-terminal domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019BDBD8B)

HSP 1 Score: 98.2 bits (243), Expect = 1.150e-19
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 0
Query:    4 KTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVA-SLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEF--VRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTY 241
            +T  + V AVND PI    N  +  EDT +A+ GIS+ D D   +P  +    ++  +GTLQLG +   ++      S ++   G    +NAAL+GL Y G   ++G DTL  T +D G +G G     S  + ITVAPVND P+I+ P    +         ED    L    V D D+    +  I+S+  G++  D + A SS + + +T +                ++ A+A LTY
Sbjct: 1884 QTFTINVTAVNDAPIFTLPNPPSVSEDTTLAIAGISLADVDSGSSPLVVA---LSVVSGTLQLGNTAGLTITAGSNNSSSVAFSGNLNDINAALSGLSYRGNLNFNGADTLTLTANDQGATGAGAIGIDSRVLGITVAPVNDAPVITIPGSQTVD--------EDTNLLLSGISVTDADSNPNPITVIVSSTNGTLTLDPLVAGSSTLTLTNTLDA---------------INTAIANLTY 2098          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI001CC9CAF3 (cadherin-like domain-containing protein n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CC9CAF3)

HSP 1 Score: 95.1 bits (235), Expect = 1.250e-18
Identity = 71/244 (29.10%), Postives = 112/244 (45.90%), Query Frame = 0
Query:    3 SKTVQVIVGAVNDRPIIN-GLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIR--GKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEF--VRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTY 241
            S T  + V   ND+P++      L A++    A+ GI++ DPD      G V + ++A+NG L +G      ++    + +  +R  G    VN AL  L Y   + + G DT+   V+D GN+GVGG L  S S+++ V P+N PPLI+ P            A ED    +    ++D D     V   ++ + G V    + + S + ++  T  Q  N   V   G LA V+  L  L Y
Sbjct:  590 SNTFDIAVTPANDQPVLTLPTGTLTADQGANAAISGITISDPD---VANGSVTVTLSAANGLLSVGLKTGLTFIQGTGTQDATMRFSGTLSTVNTALTSLIYRSNSTFKGTDTIAINVNDNGNTGVGGPLSDSKSLDVVVTPINKPPLITLPASP--------IANEDTNLTISGISISDIDGNGGPVTVSLTAVHGVVS---LSSTSGITLVTGTGSQDRN---VTFTGTLASVNAVLNNLVY 816          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI001BAEFBC7 (Ig-like domain-containing protein n=1 Tax=Acaryochloris marina TaxID=155978 RepID=UPI001BAEFBC7)

HSP 1 Score: 95.1 bits (235), Expect = 1.360e-18
Identity = 64/193 (33.16%), Postives = 95/193 (49.22%), Query Frame = 0
Query:    3 SKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPS---GNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTI 192
            ++TV + V  VND P++      A +E+T + V GIS+ D D D    G +E+ ++A+NG + L   +  L   +        L  RG    +N AL+ L Y G A Y+G DTL   V+DLGN+G GGAL  S ++NI VA  N  P+    + L +       A +   TPL      D D + +   +  I
Sbjct:  852 TQTVDIAVTPVNDAPLLTVPGAQAVDENTDLVVSGISINDVDVD---SGELEVTLSATNGVMSLS-QITGLAFTQGDGITDSTLIFRGTLSDINQALSNLIYRGNANYNGFDTLSIAVNDLGNTGEGGALTDSTTINIAVAATNSAPVADPDKTLTV-------AEDSGATPLAINAPTDSDGDVLTVTVDEI 1033          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A7Y7CTW5_9GAMM (Tandem-95 repeat protein (Fragment) n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A7Y7CTW5_9GAMM)

HSP 1 Score: 94.4 bits (233), Expect = 2.510e-18
Identity = 79/243 (32.51%), Postives = 120/243 (49.38%), Query Frame = 0
Query:    6 VQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGI----SVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGN--LKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPS-VILEGGLADVSVALAKLTY 241
            V++ V  VND P+I      +  EDT V   G     S+   D D     ++E+ + A NG L LG S+ +L ++    G   + +RG    +++A  GL Y   A ++G DTL   +DDLGNSG GGAL    S +ITV+ VND P++S P +++++        ED L   GT        + V    STI  ++     + D +L  +     Q+GNG S V + G  A +  A+  L+Y
Sbjct: 4391 VRIYVTGVNDAPVITFTGSPSTSEDT-VLTYGSGETQSITIADIDAGASDLLEMTVRADNGALTLG-SMTNLSVVGGADGTSLVTVRGTLTDLDSAFDGLVYTPDANFNGTDTLTVKLDDLGNSGSGGALSHEVSQSITVSAVNDAPVLSVPSDISVN--------EDSLIYFGTNETQQIIFDDVDVTASTIM-TLQLSASNGDITLGSVAGLASQSGNGTSSVTVTGTQAVLRSAIEGLSY 4622          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A844MYE7_9CYAN (DUF4347 domain-containing protein n=1 Tax=Scytonema sp. UIC 10036 TaxID=2304196 RepID=A0A844MYE7_9CYAN)

HSP 1 Score: 94.0 bits (232), Expect = 3.320e-18
Identity = 75/253 (29.64%), Postives = 127/253 (50.20%), Query Frame = 0
Query:    2 VSKTVQVIVGAVNDRPIINGLNL-LAAEEDTPVAVVG---ISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGN--LKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGA------LRSSFSVNITVAPVNDPPLISTPRELNISGGG-VLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTY 241
            ++ +V + V ++ND P+ N LN  L   EDTP+   G   IS+ D D  + P   VE+++TA+NGT+ L  S   L   +  +G+  +   G    +N ALAG+ +    E SG  ++     DLGNSG+         L ++ ++NI +  VNDPP+   P +L       ++F+ E+         ++DPD      I  T   + GT  +   + L + +  ++   N  ++IL G +AD++ ALA +T+
Sbjct: 2106 ITNSVSIDVQSINDAPVNNVLNKELTTLEDTPIVFSGNNLISISDIDAGNQP---VEVILTATNGTIALS-STKELQFTQGSNGSNGMMFTGTIANINTALAGMTFNPTPEASGSASIKIRTSDLGNSGIPNTPDDEEVLTATDTININIQSVNDPPINQVPGKLTTDEDKPIVFSKENG----NLISISDPDAG-ANPIQVTFVVTNGTLSLSGTTGLNIWNGNSDGLNNA-TMILSGTIADINTALAGMTF 2348          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A537MBV0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MBV0_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 3.670e-18
Identity = 67/196 (34.18%), Postives = 94/196 (47.96%), Query Frame = 0
Query:    6 VQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTL---QLGGSVASLYLMEAPSGNLKIRGKTGPVNAALA---GLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGS 195
            V V VGAVND P+      +AA ED PVA+ G+SV D D + +   I   L     GT     + G + +  +    SG++ + G    +NA LA   G+ Y  AA+Y+G DTL  T  D G+ G GGAL  S +V IT+AP ND P             G +   ED  +     G +D D + +   +   FG+
Sbjct:  523 VVVTVGAVNDAPVNVVGGAVAASEDVPVAITGLSVSDVDANPSADVISVTLSVGHGGTTVRTDVVGGLTAADISGNGSGSVVLSGTQNAINATLAAANGVVYASAADYNGSDTLTMTTSDNGHGGSGGALGDSDTVAITIAPTNDAP--------TAPASGSVSTNEDTPSAATAIGASDVDGDTLSYSVKPGFGA 710          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: T0QLQ2_SAPDV (Cadherin domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QLQ2_SAPDV)

HSP 1 Score: 92.8 bits (229), Expect = 8.520e-18
Identity = 71/233 (30.47%), Postives = 110/233 (47.21%), Query Frame = 0
Query:   25 LAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPP--------LISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNG------PSVILEGGLADVSVALAKLTYTS 243
            +A +EDTP  + G+ V D D  DT    V++ +   +G  QL  S A L ++E   G L ++G    +N AL    Y+GA  Y GQD++V T +DLGN+G GG  ++S ++ + +  V DPP        L STP +  +   G L   +   +      V D D    R +  +I  +VG   +   + L   H T   T +G       +  + G + D++ AL  L Y S
Sbjct: 5484 IAIDEDTPYTLHGLVVTDDDAADTFGSEVQVTLACEHGHFQLDTSTAGLDILEEEPGLLHVQGPLELINYALQRATYVGALNYFGQDSIVVTANDLGNTGTGGPQQASATMAVVITSVCDPPTWASTPPALFSTPEDTPLLLSGALRLQDVDAS------VMDVD----RVLTLSISVAVGGVLLATHAGL---HVTASSTNDGVGHLYYSTATIAGTVDDLNAALRGLMYLS 5703          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI001CA75A4E (Ig-like domain-containing protein n=1 Tax=Leptothermofonsia sichuanensis TaxID=2917832 RepID=UPI001CA75A4E)

HSP 1 Score: 92.4 bits (228), Expect = 1.110e-17
Identity = 80/249 (32.13%), Postives = 118/249 (47.39%), Query Frame = 0
Query:    3 SKTVQVIVGAVNDRPIINGLN-LLAAEEDTPVAVVGISVEDPDCDDT----PRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEF----VRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGP-SVILEGGLADVSVALAKLTY 241
            ++T+ V + AVND P++  +N  +   EDTP+ + GISV D D   +       +++  + A+ GT  + G+  SL         L I G    VNAAL  L Y G  +Y G D  + TV+DLGN+G+GGAL  + +++I V PVNDPP       L    G V  A +  L   G   +   D +     VR  +S   G++         ++     TT    NG  S   EG +  ++ ALA L Y
Sbjct: 1795 TQTLTVNINAVNDAPVLTLVNSTITGAEDTPILLSGISVTDVDAGTSNIQVTVSVLQGTLNATPGTTTVTGAGTSL---------LTITGAQNAVNAALNTLTYQGNLDYFGPDEAIVTVNDLGNTGIGGALTDTRTLSINVTPVNDPPTF-----LAFPTGPVPVAEDTNLIFTGGRAIVVTDVDSGPNPVRLTLSVNNGTL---------TMNTSGLTTIAGANGSQSATYEGTINAITTALASLVY 2020          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6U7_ECTSI6.850e-7354.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBW5_9PHAE1.510e-7152.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0019BDBD8B1.150e-1931.12Pre-peptidase C-terminal domain-containing protein... [more]
UPI001CC9CAF31.250e-1829.10cadherin-like domain-containing protein n=1 Tax=Ko... [more]
UPI001BAEFBC71.360e-1833.16Ig-like domain-containing protein n=1 Tax=Acaryoch... [more]
A0A7Y7CTW5_9GAMM2.510e-1832.51Tandem-95 repeat protein (Fragment) n=1 Tax=Oceano... [more]
A0A844MYE7_9CYAN3.320e-1829.64DUF4347 domain-containing protein n=1 Tax=Scytonem... [more]
A0A537MBV0_9PROT3.670e-1834.18Uncharacterized protein (Fragment) n=1 Tax=Alphapr... [more]
T0QLQ2_SAPDV8.520e-1830.47Cadherin domain-containing protein n=1 Tax=Saprole... [more]
UPI001CA75A4E1.110e-1732.13Ig-like domain-containing protein n=1 Tax=Leptothe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040853RapA2, cadherin-like domainPFAMPF17803Cadherin_4coord: 5..67
e-value: 2.7E-5
score: 24.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13539contigH-elongata_contig13539:7070..7798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13539.2504.1mRNA_H-elongata_contig13539.2504.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13539 7070..7798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13539.2504.1 ID=prot_H-elongata_contig13539.2504.1|Name=mRNA_H-elongata_contig13539.2504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
IVSKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPR
GIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLE
YIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLIST
PRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDE
IDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTYTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040853RapA2_cadherin-like