prot_H-elongata_contig135345.2499.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig135345.2499.1
Unique Name	prot_H-elongata_contig135345.2499.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	128

Homology

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: D7G926_ECTSI (Transmembrane 9 superfamily member n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G926_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.320e-77
Identity = 117/127 (92.13%), Postives = 123/127 (96.85%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            +QAVPF EI+++LALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWS FTI VGGILPYGAVFIEMFFILQSLWMGNYYYVFGFL+LVF+ILIVTCADIAMVFCYFQLCAEDY W
Sbjct:  395 TQAVPFVEIIKVLALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSCFTITVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLMLVFIILIVTCADIAMVFCYFQLCAEDYHW 521

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A835ZB63_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB63_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.230e-58
Identity = 96/127 (75.59%), Postives = 106/127 (83.46%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            +QAVPF  +  +L LWF IS+P+VFLGAY GYR+P   YPV TSNIPRQIPD PWFL   FTIAVGGILP+GAVF+EMFFIL S+WMG YYYVFGFL LVFLIL+VTCADI MV CYFQLCAEDY W
Sbjct:  445 TQAVPFLTMAALLLLWFGISMPLVFLGAYLGYRRPALEYPVETSNIPRQIPDTPWFLAPIFTIAVGGILPFGAVFVEMFFILSSMWMGQYYYVFGFLFLVFLILLVTCADITMVLCYFQLCAEDYHW 571

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A836CR71_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR71_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.990e-55
Identity = 91/127 (71.65%), Postives = 107/127 (84.25%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            +QAVPF  +  +L LWF +SVP+VFLGA+ GYR+    +PV TSNIPR+IP+QP+FL   FTIAVGGILP+GAVF+EMFFIL S+WMG YYYVFGFL LVFLIL+VTCAD+ MVFCYFQLCAEDY W
Sbjct:  458 TQAVPFLSMAALLLLWFGVSVPLVFLGAFLGYRRAPLEFPVETSNIPREIPEQPFFLSPIFTIAVGGILPFGAVFVEMFFILSSMWMGQYYYVFGFLFLVFLILLVTCADVTMVFCYFQLCAEDYHW 584

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A7S1E6H1_9STRA (Transmembrane 9 superfamily member n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E6H1_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.570e-54
Identity = 80/127 (62.99%), Postives = 103/127 (81.10%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            + AVPF  ++ +L LWF IS P+VF GAYFGY++    +PV TS+IPRQIPDQPWF+   FT+A+GGILP+GA F+E++FIL S+WM  YYYVFGFLLLV+ ILI+TCA+I ++FCYFQLC E+Y W
Sbjct:   36 TDAVPFTTMIVLLVLWFGISTPLVFFGAYFGYKQDAIEFPVNTSSIPRQIPDQPWFMGIPFTLAIGGILPFGACFVELYFILASVWMDQYYYVFGFLLLVYFILIITCAEITVLFCYFQLCGENYHW 162

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A7R9VNS0_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VNS0_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.490e-53
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            S AVPF  ++ +L LWF IS P+VF GAYFGY++    +PV TSNIPRQIPDQPWF+   FT+ VGGILP+GA F+E++FIL S+WM  YYYVFGFLLLVFLIL++TCA+I ++F YFQLC E+Y W
Sbjct:  116 SDAVPFTTMIVLLVLWFGISTPLVFFGAYFGYKQDAIEFPVNTSNIPRQIPDQPWFMGIPFTLLVGGILPFGACFVELYFILSSVWMDQYYYVFGFLLLVFLILLITCAEITVLFTYFQLCGENYHW 242

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: V4JWX3_EUTSA (Transmembrane 9 superfamily member (Fragment) n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4JWX3_EUTSA)

HSP 1 Score: 174 bits (440), Expect = 1.360e-52
Identity = 77/127 (60.63%), Postives = 102/127 (80.31%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            S A+PF  +  ++ LWF ISVP+VF+G+Y GY+KP    PV T+ IPRQ+P+QPW++   F+I +GGILP+GAVFIE+FFIL S+W+  +YY+FGFL +VFLILIVTCA+I +V CYFQLC+EDY W
Sbjct:   16 SGAIPFGTMFALVCLWFGISVPLVFIGSYLGYKKPAIEDPVKTNKIPRQVPEQPWYMKPRFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFLILIVTCAEITVVLCYFQLCSEDYNW 142

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A7S4BHG5_CHRCT (Transmembrane 9 superfamily member n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BHG5_CHRCT)

HSP 1 Score: 175 bits (443), Expect = 1.470e-52
Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            S AVPF  +  +L LWF IS+P+VFLGAYFGYR+     PV  + IPRQ+P+Q W++  +F++ VGG+LP+GAVFIE+FFIL S+W+  +YYVFGFLLLVF+ILI+TCA+I MV CYFQLCAEDY W
Sbjct:   54 SGAVPFGTLCALLVLWFGISMPLVFLGAYFGYRRKPLDLPVRVNQIPRQVPEQVWYMQPAFSVTVGGVLPFGAVFIELFFILSSIWLHQFYYVFGFLLLVFIILIITCAEITMVMCYFQLCAEDYHW 180

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A7S1ZE55_TRICV (Transmembrane 9 superfamily member n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZE55_TRICV)

HSP 1 Score: 183 bits (464), Expect = 5.510e-52
Identity = 85/127 (66.93%), Postives = 103/127 (81.10%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            S AVPFA +V +L LWF IS P+VF GAYFGY++    +PV TSNIPRQIPDQPWF+   FT+ VGGILP+G+ F+E++FIL S+WM  YYYVFGFLLLVF ILIVTCA+I ++FCYFQLC E+Y W
Sbjct:  470 SDAVPFATMVVLLVLWFGISTPLVFFGAYFGYKQDAIEFPVNTSNIPRQIPDQPWFMGIPFTLIVGGILPFGSCFVELYFILSSVWMDQYYYVFGFLLLVFFILIVTCAEITVLFCYFQLCGENYHW 596

[Close]

BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A7S4F1H2_CHRCT (Transmembrane 9 superfamily member n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1H2_CHRCT)

HSP 1 Score: 175 bits (443), Expect = 9.830e-52
Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            S AVPF  +  +L LWF IS+P+VFLGAYFGYR+     PV  + IPRQ+P+Q W++  +F++ VGG+LP+GAVFIE+FFIL S+W+  +YYVFGFLLLVF+ILI+TCA+I MV CYFQLCAEDY W
Sbjct:  123 SGAVPFGTLCALLVLWFGISMPLVFLGAYFGYRRKPLDLPVRVNQIPRQVPEQVWYMQPAFSVTVGGVLPFGAVFIELFFILSSIWLHQFYYVFGFLLLVFIILIITCAEITMVMCYFQLCAEDYHW 249

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BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Match: A0A1J3DKF0_NOCCA (Transmembrane 9 superfamily member (Fragment) n=2 Tax=rosids TaxID=71275 RepID=A0A1J3DKF0_NOCCA)

HSP 1 Score: 174 bits (441), Expect = 2.020e-51
Identity = 77/127 (60.63%), Postives = 102/127 (80.31%), Query Frame = 0

Query:    1 SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLVFLILIVTCADIAMVFCYFQLCAEDYRW 127
            S A+PF  +  ++ LWF ISVP+VF+G+Y GY+KP    PV T+ IPRQ+P+QPW++   F+I +GGILP+GAVFIE+FFIL S+W+  +YY+FGFL +VFLILIVTCA+I +V CYFQLC+EDY W
Sbjct:  153 SGAIPFGTMFALVCLWFGISVPLVFIGSYLGYKKPAIEDPVKTNKIPRQVPEQPWYMKPGFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFLILIVTCAEITIVLCYFQLCSEDYNW 279

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot

BLAST of mRNA_H-elongata_contig135345.2499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G926_ECTSI	1.320e-77	92.13	Transmembrane 9 superfamily member n=2 Tax=Ectocar...	[more]
A0A835ZB63_9STRA	1.230e-58	75.59	Transmembrane 9 superfamily member n=1 Tax=Tribone...	[more]
A0A836CR71_9STRA	1.990e-55	71.65	Transmembrane 9 superfamily member n=1 Tax=Tribone...	[more]
A0A7S1E6H1_9STRA	2.570e-54	62.99	Transmembrane 9 superfamily member n=2 Tax=Thalass...	[more]
A0A7R9VNS0_9STRA	2.490e-53	64.57	Transmembrane 9 superfamily member n=1 Tax=Pseudic...	[more]
V4JWX3_EUTSA	1.360e-52	60.63	Transmembrane 9 superfamily member (Fragment) n=2 ...	[more]
A0A7S4BHG5_CHRCT	1.470e-52	62.99	Transmembrane 9 superfamily member n=1 Tax=Chrysot...	[more]
A0A7S1ZE55_TRICV	5.510e-52	66.93	Transmembrane 9 superfamily member n=1 Tax=Trieres...	[more]
A0A7S4F1H2_CHRCT	9.830e-52	62.99	Transmembrane 9 superfamily member n=1 Tax=Chrysot...	[more]
A0A1J3DKF0_NOCCA	2.020e-51	60.63	Transmembrane 9 superfamily member (Fragment) n=2 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004240	Nonaspanin (TM9SF)	PFAM	PF02990	EMP70	coord: 1..127 e-value: 5.3E-50 score: 170.6
IPR004240	Nonaspanin (TM9SF)	PANTHER	PTHR10766	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	coord: 1..127
None	No IPR available	PANTHER	PTHR10766:SF92		coord: 1..127
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..80
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 121..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 81..91
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..54
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 92..120
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	TMHMM	TMhelix		coord: 54..76
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 96..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig135345	contig	H-elongata_contig135345:183..1232 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig135345.2499.1	mRNA_H-elongata_contig135345.2499.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig135345 183..1232 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig135345.2499.1 ID=prot_H-elongata_contig135345.2499.1|Name=mRNA_H-elongata_contig135345.2499.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
SQAVPFAEIVEILALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQI
PDQPWFLWSSFTIAVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLLLV
FLILIVTCADIAMVFCYFQLCAEDYRW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004240	EMP70