prot_H-elongata_contig135294.2492.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135294.2492.1
Unique Nameprot_H-elongata_contig135294.2492.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
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BLAST of mRNA_H-elongata_contig135294.2492.1 vs. uniprot
Match: A0A6H5KCA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCA8_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 5.440e-23
Identity = 51/81 (62.96%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:    1 TKQPRLLYTIRNPLLHKASIFFESVCRFGQHIKE-GKIDQEEATRDRT----AKNPMYTFCRDAAMWLDSPMFFKVYRNMQ 76
            TK PR+L TIRNPLLHKASIFFESVCRFGQHI + G IDQE AT  R      +   Y FCRD  MW+ S  F KVYRN +
Sbjct:  180 TKTPRVLITIRNPLLHKASIFFESVCRFGQHISDNGTIDQEAATLARVNGKGVETEQYNFCRDPEMWVGSKQFDKVYRNFE 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135294.2492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KCA8_9PHAE5.440e-2362.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135294contigH-elongata_contig135294:798..1779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135294.2492.1mRNA_H-elongata_contig135294.2492.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135294 798..1779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135294.2492.1 ID=prot_H-elongata_contig135294.2492.1|Name=mRNA_H-elongata_contig135294.2492.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
TKQPRLLYTIRNPLLHKASIFFESVCRFGQHIKEGKIDQEEATRDRTAKN
PMYTFCRDAAMWLDSPMFFKVYRNMQ
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