prot_H-elongata_contig13502.2473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13502.2473.1
Unique Nameprot_H-elongata_contig13502.2473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1033
Homology
BLAST of mRNA_H-elongata_contig13502.2473.1 vs. uniprot
Match: D7FNI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI5_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 1.080e-132
Identity = 419/1163 (36.03%), Postives = 524/1163 (45.06%), Query Frame = 0
Query:    1 QVERTVCSVSEKLLMHGRSAEASRLLRLASRLSGKPVRVDGQCVINPNDPVALVPARPLLEHPYAAISFLLELSGSQD-SRARLAKT-----------------------------LYPAFAPS------GAGEL-SELAGDLSRLWSSDSEE----EGKDEEKNIWGLSQEAGERGPGEPSESLQN-DGLDEGLDTREWLEAFE--GEAKSDSAGSSA-QTDGERFPFSIFVYFSLSYGKRVTVLLLWVPSGCPPHT---EYRLFQRPTAPRRPVLRHKYGARCVGADIRSLPDVAG----DSGGVPFIRPCQTLEAYQS-ASTAGFSRRRSVPEAYVVRDALHMLQGLPGDTFVLVEERDG----GPGCACRSRH----------------------------------------FSLSSSAESDLAVASLSPGALAGAIGDFVRVGNVAEYLRAFVADAV-ELPTAADAQIPCGERR----HGHVTQAFGAYASGQEGGGNGETLVGVLLLLRPHVESLEFIARVVKAGVGSWFANHSGQN-------------TRAVENAGN-----LRERTGRLLAALHESLVADALL---ERTVLDSLGL-EVAACAPRRCGLLLHVFFEVLAPYLSLINTWITEGRIQDPHGELFFSQTGGSDSGGSSAVERHGKGSSGSFVEGGIRNRYT---DPVVHVWDMGIVLHSKALPPFLAPLASAVALAGQDVLLMRKVRALVASAPHSDHFAGAQGAARRFVVCLWFPGVPRLEQALKSRSSGIGPGLGCESESLSLASRLFESLDTLAMRVHHSSSSGDHAGLEFENRLGRKYAEEVARVSGDGRVVSEIAKVDRQSSAHWMETAGGYGGKDEKGGKSFSRQDWDRNNFIDESVFEGQNGIAALAGEESKECQGKENAAIIDAAASGGGHAGEEYSLSTTGMDGVV-LPAVTQGHAWAARSLVAAQSTEARRPDERAQKPCAHGNARSSAACETDGTDQQMQGFFWGTARLALSPDATLRRSLHPTLAPPCPPISRGGVSVRLGERALNAKLTGGGIASRTFDRERIRRRGDDGVQDEKSVAKAA--DEVVAVFPPSVVLECCLLSPLWEHCRLTDSSCLGMFVEELEIVRLAGVLRGVYMSPSGTASCSPLFRFRETLFSLLGSFP 1033
            +VE  +CS +EK +MHG++  A+RLL LAS L+GKP+RV+G  + +         A P LEHPYAA++  L LSGSQ  + AR A+                                PA          GA EL +   GD SRLWSSDS+E    EG  EE       QE  E G G  S +L   + +DEG  TREWL+AFE  GE    +AG +A + + ER      V  + +  + V  L    P    P+T      L +R + P  P  RH YG+ C+GADIRSL    G    D  G  F+RPCQTLEA Q+    A   RRRS+PEA VVR ALHML GL GD FV     D     G   + + RH                                        FSLS SA SDLAVASLSP ALAG +GD VRVG+  EYLRAFV DA      AA+A      +R    HG        + S     G+GET+VG+L LLRP  ESLE   ++V+ G G W                     T A  + G      L ERTGRLL+ LH++LV+ AL+         S G+ + AA APRR G LLH+F EVLAPYL L+++WITEGR+ DPHGELFFS+ GG                    + G  R       DPVVHVWD GIVLHSKALPPFLAPLA AVALAGQD+ LMR+VRALV                                    SR +  G      SE+ SLA  L ESL  LA RV  ++ +G            +K  ++ A  +G G         DR+S                                            AA++                               +S++G+DG++ L    +G               A++ DE                           GFF GTA+LAL P A  +R LHP+LAPP PP +RG      G R  +  + G     R      +R  G           +A   DEV    PP++VLE CLL  L EHCRL  SSCL +F +EL IV +AGVLR VY+SP G  + +PL RFR  LF LLG+ P
Sbjct:   57 KVEAAICSFAEKFVMHGKTVNATRLLLLASSLTGKPMRVEGHRM-DTGGVNKTAAASPPLEHPYAALALALALSGSQRWAAAREAEVEGDEKEGDTPDAESVEGXXXXXXXXXXXXXXPARDEEEGEERQGAAELLAGFEGDSSRLWSSDSDEGSELEGGPEE-------QEEEEDGVGSFSSALPVVEDVDEG-GTREWLQAFEDDGEGSPRAAGYTAGEIEAERSGRWGKVENNGASTQLVEPLAPSYPPSSSPNTGVDSKNLARRASHP--PAARHNYGSPCIGADIRSLGGRRGAHDGDVHGSSFLRPCQTLEACQTRGGKAVGRRRRSIPEAEVVRAALHMLAGLSGDIFVRRVRGDASDTRGEQLSQQERHRAVGARGTGXXXXXXXXXXXXXDRWDVVSGSARARRGQEWFSLSESAASDLAVASLSPEALAGVLGDLVRVGSTVEYLRAFVTDAEGSASVAAEAAAAVLRQRVPRGHGEGRDTAVEHDSSSTSSGSGETIVGLLSLLRPEAESLELTRQLVEDGAGWWXXXXXXXXXXXXXXXXXXXXXTGAERHVGGGSGAGLHERTGRLLSVLHDALVSSALVGIGPTPPEKSRGVGDTAARAPRRRGWLLHMFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXADNIGGHNRQATAVGRDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXSRKARTGAMASPGSETFSLAETLSESLRRLAERVRRANDAGPSR---------KKDQDDGAGCTGRG---------DRRSGXXXX------------------------------XXXXXXXXXAAVS------------------------------PVSSSGLDGIIDLEESREG---------------AKQDDE--------------------------LGFFGGTAQLALKPGAMFQRPLHPSLAPPSPPSTRGPSPAVGGRRIASCFIAGMSRRGRGGGSSDVRGAGGYPXXXXXXXXEATMEDEVAKALPPTMVLETCLLGALREHCRLASSSCLSVFADELGIVSIAGVLRDVYLSPGGAKTDAPLSRFRGVLFGLLGALP 1083          
BLAST of mRNA_H-elongata_contig13502.2473.1 vs. uniprot
Match: A0A6H5L6D8_9PHAE (GCP_N_terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D8_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 7.350e-131
Identity = 436/1254 (34.77%), Postives = 540/1254 (43.06%), Query Frame = 0
Query:    1 QVERTVCSVSEKLLMHGRSAEASRLLRLASRLSGKPVRVDGQCVINPNDPVALVPARPLLEHPYAAISFLLELSGSQ------------DSR------------------ARLAKTLYPAFAPSGAGEL-SELAGDLSRLWSSDS----------EEEGKDEEKNIWGLSQEAGERGPGEPSESLQNDGLDEGLDTREWLEAFE--GEAKSDSAGSSA-QTDGERFPFSIFVYFSLSYGKRVTVLLLWVPSGCPPHTEYRLFQRPTAPRR----PVLRHKYGARCVGADIRSLPDVAG----DSGGVPFIRPCQTLEAYQS-ASTAGFSRRRSVPEAYVVRDALHMLQGLPGDTFVLVEERD----GGPGCACRSRH----------------------------------------FSLSSSAESDLAVASLSPGALAGAIGDFVRVGNVAEYLRAFVADAV-ELPTAADAQIPC-------------------------GERR---HGHVTQAFGAYASG-------------------QEGGG-----------------NGETLVGVLLLLRPHVESLEFIARVVKAGVGSWFANHSGQ---------------NTRAVENAGN-----LRERTGRLLAALHESLVADALL---ERTVLDSLGL-EVAACAPRRCGLLLHVFFEVLAPYLSLINTWITEGRIQDPHGELFFSQTGGSDSGGSSAVERHGKGSSGSFVEGGIRNRYT----DPVVHVWDMGIVLHSKALPPFLAPLASAVALAGQDVLLMRKVRALVASAPHSDHFAGAQGAARRFVVCLWFPGVPRLEQALKSRSSGIGPGLGCESESLSLASRLFESLDTLAMRVHHSSSSG--------DHAGLEFENRLGRKYAEEVARVSGDGRVVSEIAKVDRQSSAHWMETAGGYGGKDEKGGKSFSRQDWD-------RNNFIDESVFEGQNGIAALAGEESKECQGKENAAIIDAAASGGGHAGEEYSLSTTGMDGVVLPAVTQGHAWAARSLVAAQSTEARRPDERAQKPCAHGNA--------------RSSAACETDGTDQQMQGFFWGTARLALSPDATLRRSLHPTLAPPCPPISRGGVSVRLGERALNAKLTG--GGIASRTFDRERIRRRGDDGVQDEKSVAKAADEVVAVFPPSVVLECCLLSPLWEHCRLTDSSCLGMFVEELEIVRLAGVLRGVYMSPSGTASCSPLFRFRETLFSLLGSFP 1033
            +VE  +CSV+EK +MHG++  A+RLL LAS L+GKP+RV+G  +       A   A P LEHPYAA++  L LSGSQ            D R                   R A+         GA EL +   GD SRLWSSDS          EE+ ++EE  +  LS       PG          +DEG  TREWL+AFE  GE    + G +A + + ERF     V    + G    +     PS  PP +           RR    P  RH YGA C+GADIR+L    G    D  G  F+RPCQTLEA Q+    A   RRRS+PEA VVR ALHML GL GD FV     D    GG     + RH                                        FSLS SA SDLAVASLSP ALAG + D +RVG+ AEYLRAFVADA      AA+A                             G+ R   HG  TQAF A                       Q+G G                 +GET+VG+L LLRP  ESLE   ++V+ G G W A                    +T A  + G      L ERTGRLL+ LH++LV+ AL+         S G+ +  A APRR G LLHVF EVLAPYL L+++WITEGR+ DPHGELFFS+ GG                  +   GG   + T    DPVVHVWD GIVLHSKALPPFLAPLA AVALAGQD+ LMR+VRALV                                     R +G G      SE+ SLA  L ESL  LA RV  ++ +G        D AG     R  R+                 ++ V        ++     GGK   G  S S +  +                  G    A  A E+++E      AA      +  G  G + S       GV +  V      ++          A  PD   ++  A                    +A     G D ++ GFF GTA+LAL P A  +R LHP+LAPP PP +R       G R  +  +TG                         E+  A   DEV    PP++VLE CLL  L EHCRL  SSCL +F +EL  V +AGVLR VY+SP G  + +PL RFR  LF LLG  P
Sbjct:   57 KVEAAICSVAEKFVMHGKTVNATRLLLLASSLTGKPMRVEGHRMDTGGVNKAAA-ASPPLEHPYAALALALALSGSQRWAAAKEAEVEGDEREGDTPDAESIEGGGCGGSGRSARDEEXXEEREGAAELLAGFEGDSSRLWSSDSDXXXXXXXGPEEQEQEEEDGVGSLSSAL----PGVED-------VDEG-GTREWLQAFEDDGEGSPRADGCTAGEIETERFGHRGKVE---NNGASTQLAEPLAPSYSPPSSPNTGVDSKNLTRRASHPPAARHNYGAPCIGADIRNLGGRRGARDGDVDGASFLRPCQTLEACQTRGGEAVGRRRRSIPEAEVVRAALHMLAGLSGDIFVRRVNGDASDTGGEQLPQKGRHGAAGTRGTGXXXRTGGGSSGPSRRWGVVTGSASARRGQEWFSLSESAASDLAVASLSPEALAGVLEDLLRVGSTAEYLRAFVADAEGSASVAAEAXXXXXXXXXXXXXXXXXXXXXXASKSYGRGKERGPKHGLTTQAFVACVRRHLESFEDTVARRDRWLYRRQQGQGXXXXXXXXXXXXXXXXXSGETIVGLLSLLRPEAESLELTRQLVEDGAGWWVATPXXXXEGVWPRNRRRRRTGDTNAERHVGGGSGAGLHERTGRLLSVLHDALVSSALVGIGPTPPEKSRGVGDTEALAPRRRGWLLHVFCEVLAPYLRLVDSWITEGRLLDPHGELFFSRIGGXXXXXXXXXXXXXXXXXXADNIGGHNRQATAVGGDPVVHVWDTGIVLHSKALPPFLAPLAPAVALAGQDISLMRRVRALVGXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXERKAGTGAMSSPGSETFSLAETLSESLRQLAGRVRRANDAGPSRKKDQDDGAGCTGRGRGDRRSGGXXXXXXXXXXXXXAVSPVSSSGLGGIVDLEESRGGKHGDGRNSASTESEEGATSPAXXXXXXXXXXXXGTEAEATAATEKNRESGSVSVAAPEGEDVTNDGSDGGDCS-------GVGVGGVRDRRTGSSGFGDGGXGGPATSPDVLTEEASADVGGDXXXXXXXXXXXXXXXAAEGANQGDDPEL-GFFGGTAQLALKPGAMFQRPLHPSLAPPSPPSTRQPSPAVGGRRTASCFITGISHXXXXXXXXXXXXXXXXXXXXXXEEDEATMEDEVAKALPPTMVLETCLLGALREHCRLASSSCLAVFADELGTVSIAGVLRDVYLSPGGAKTDAPLSRFRGVLFGLLGGLP 1279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13502.2473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNI5_ECTSI1.080e-13236.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6D8_9PHAE7.350e-13134.77GCP_N_terminal domain-containing protein n=1 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 487..615
e-value: 9.4E-12
score: 45.2
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 225..995

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13502contigH-elongata_contig13502:842..6373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13502.2473.1mRNA_H-elongata_contig13502.2473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13502 842..6373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13502.2473.1 ID=prot_H-elongata_contig13502.2473.1|Name=mRNA_H-elongata_contig13502.2473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1033bp
QVERTVCSVSEKLLMHGRSAEASRLLRLASRLSGKPVRVDGQCVINPNDP
VALVPARPLLEHPYAAISFLLELSGSQDSRARLAKTLYPAFAPSGAGELS
ELAGDLSRLWSSDSEEEGKDEEKNIWGLSQEAGERGPGEPSESLQNDGLD
EGLDTREWLEAFEGEAKSDSAGSSAQTDGERFPFSIFVYFSLSYGKRVTV
LLLWVPSGCPPHTEYRLFQRPTAPRRPVLRHKYGARCVGADIRSLPDVAG
DSGGVPFIRPCQTLEAYQSASTAGFSRRRSVPEAYVVRDALHMLQGLPGD
TFVLVEERDGGPGCACRSRHFSLSSSAESDLAVASLSPGALAGAIGDFVR
VGNVAEYLRAFVADAVELPTAADAQIPCGERRHGHVTQAFGAYASGQEGG
GNGETLVGVLLLLRPHVESLEFIARVVKAGVGSWFANHSGQNTRAVENAG
NLRERTGRLLAALHESLVADALLERTVLDSLGLEVAACAPRRCGLLLHVF
FEVLAPYLSLINTWITEGRIQDPHGELFFSQTGGSDSGGSSAVERHGKGS
SGSFVEGGIRNRYTDPVVHVWDMGIVLHSKALPPFLAPLASAVALAGQDV
LLMRKVRALVASAPHSDHFAGAQGAARRFVVCLWFPGVPRLEQALKSRSS
GIGPGLGCESESLSLASRLFESLDTLAMRVHHSSSSGDHAGLEFENRLGR
KYAEEVARVSGDGRVVSEIAKVDRQSSAHWMETAGGYGGKDEKGGKSFSR
QDWDRNNFIDESVFEGQNGIAALAGEESKECQGKENAAIIDAAASGGGHA
GEEYSLSTTGMDGVVLPAVTQGHAWAARSLVAAQSTEARRPDERAQKPCA
HGNARSSAACETDGTDQQMQGFFWGTARLALSPDATLRRSLHPTLAPPCP
PISRGGVSVRLGERALNAKLTGGGIASRTFDRERIRRRGDDGVQDEKSVA
KAADEVVAVFPPSVVLECCLLSPLWEHCRLTDSSCLGMFVEELEIVRLAG
VLRGVYMSPSGTASCSPLFRFRETLFSLLGSFP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041470GCP_N
IPR007259GCP