prot_H-elongata_contig13466.2455.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13466.2455.1
Unique Nameprot_H-elongata_contig13466.2455.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
[Close]
BLAST of mRNA_H-elongata_contig13466.2455.1 vs. uniprot
Match: D8LQZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQZ1_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 6.440e-34
Identity = 56/83 (67.47%), Postives = 75/83 (90.36%), Query Frame = 0 
Query:   90 GSAGAMADDMLIELVGQDYGMMAMLRNDKFKSLIVFLRNIPPNEWVSEVSKTYPGDDEVKGMLGQVGKLMKMMDYYESKKPRK 172
            G++GA+ D++L +LVGQDYGM+A+LRNDKFK LIV LRN+PP+EWV+EV++TYP DDEVK M+GQVGKLM+M+DYY+  +P+K
Sbjct:  146 GASGAIEDELLAQLVGQDYGMLALLRNDKFKGLIVLLRNLPPDEWVAEVARTYPDDDEVKSMMGQVGKLMRMIDYYQKNQPKK 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13466.2455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQZ1_ECTSI6.440e-3467.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13466contigH-elongata_contig13466:3237..7895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13466.2455.1mRNA_H-elongata_contig13466.2455.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13466 3209..8277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13466.2455.1 ID=prot_H-elongata_contig13466.2455.1|Name=mRNA_H-elongata_contig13466.2455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MNASDRLGRRYLPLKSLSCEGDWPRPHTVATAIGRQHRPMARFTVKLLST
AEGADGEDIIMDAPKEKEITTGIGATSEGETANSSAEPLGSAGAMADDML
IELVGQDYGMMAMLRNDKFKSLIVFLRNIPPNEWVSEVSKTYPGDDEVKG
MLGQVGKLMKMMDYYESKKPRK*
back to top