prot_H-elongata_contig134427.2442.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig134427.2442.1
Unique Nameprot_H-elongata_contig134427.2442.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Match: A0A6H5JYC8_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC8_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.860e-21
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    3 LVDSWLEGIGLGYAVPIFSGQGINTPDMLSELDVVDFPELGISNHNDRKKV 53
            LVDSWL GIGLGYAVPIF+GQGI++PDMLSELDVVDFPELGIS+ NDRKK+
Sbjct:    4 LVDSWLNGIGLGYAVPIFAGQGIDSPDMLSELDVVDFPELGISDQNDRKKL 54          
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Match: A0A836CN55_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN55_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 7.090e-12
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 MGLVDSWLEGIGLGYAVPIFSGQGINTPDMLSELDVVDFPELGISNHNDRKKV 53
            M LV++WL GIGLGYA+P F  QG+  P+ LS L + +F  LG++N  DRKK+
Sbjct:    1 MVLVETWLSGIGLGYAIPTFKAQGVIVPEKLSRLSLDEFEGLGVTNTEDRKKL 53          
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Match: A0A7S1ZZ94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZ94_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.700e-10
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 MGLVDSWLEGIGLGYAVPIFSGQGINTPDMLSELDVVDFPELGISNHNDRKKV 53
            MGLV +WL GIGLG+A+P F   GI TP  L+EL++  + +LG+ + N+RKK+
Sbjct:   76 MGLVTTWLNGIGLGHAIPAFRAAGIVTPTDLAELELHMYEDLGVKSSNERKKL 128          
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Match: A0A448Z7E2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7E2_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.490e-9
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 MGLVDSWLEGIGLGYAVPIFSGQGINTPDMLSELDVVDFPELGISNHNDRKKV 53
            MGLV +WL GIGLG  VP F   GI +P  L++LDV  F  LG++N +DR+K+
Sbjct:    1 MGLVSTWLNGIGLGSVVPTFEAAGIVSPSHLADLDVAYFESLGVTNPDDRRKL 53          
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Match: A0A1Z5KT23_FISSO (Kinesin-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KT23_FISSO)

HSP 1 Score: 59.7 bits (143), Expect = 4.660e-9
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 MGLVDSWLEGIGLGYAVPIFSGQGINTPDMLSELDVVDFPELGISNHNDRKKV 53
            MGLV +WL GIGL YAVP F   GI+ P  L++LDV  F  LG+ +  DR+K+
Sbjct:    1 MGLVATWLNGIGLSYAVPTFHAAGIDNPAALAQLDVSHFEALGVKDGEDRRKL 53          
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Match: D8LAW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW3_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.710e-7
Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = 0
Query:   24 GINTPDMLSELDVVDFPELGISNHNDRKKV 53
            GI++PDMLSELDVVDFPELGIS+ NDRKK+
Sbjct:   56 GIDSPDMLSELDVVDFPELGISDQNDRKKL 85          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134427.2442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JYC8_9PHAE2.860e-2186.27SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CN55_9STRA7.090e-1252.83SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S1ZZ94_9STRA5.700e-1050.94Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A448Z7E2_9STRA2.490e-952.83Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5KT23_FISSO4.660e-952.83Kinesin-like protein n=2 Tax=Fistulifera solaris T... [more]
D8LAW3_ECTSI2.710e-783.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainPFAMPF07647SAM_2coord: 4..53
e-value: 4.5E-7
score: 29.9
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 1..53
score: 10.584
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 2..53
e-value: 1.3E-9
score: 40.0
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 4..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig134427contigH-elongata_contig134427:376..534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig134427.2442.1mRNA_H-elongata_contig134427.2442.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig134427 370..534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig134427.2442.1 ID=prot_H-elongata_contig134427.2442.1|Name=mRNA_H-elongata_contig134427.2442.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MGLVDSWLEGIGLGYAVPIFSGQGINTPDMLSELDVVDFPELGISNHNDR
KKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf