mRNA_H-elongata_contig13430.2435.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13430.2435.1
Unique NamemRNA_H-elongata_contig13430.2435.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 4.520e-77
Identity = 131/303 (43.23%), Postives = 185/303 (61.06%), Query Frame = 1
Query:    7 ARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPNSAYRERMGTTPFQMITGRPPATAMSVLAGEDGDEWTVEELDVSG-----EQMYAWQEDLRRDVMKRVREQRERVRELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGE-YRVQIAWVGLEDEEPTWEPMSTI 897
            A+ +L WC + GVP+ + SD ATH    V+  +   LGV   F VAN  WS+GT ERM REVV T +AV  ERRR   +W   + AVQWA N+AYRER  +TP+ ++ GR P T+ S LA   G+ W ++ LD +      + +   Q  L + + ++V   R R R  + RG LP F VGDYV+VARV + G   KL  TWTGPWRVV    +HV  V+  V G+ ++VHV R+  YADS L V +++++VF+ +  QG+ EM  ++++G  PA  G  Y V++ W G E++E TW+P+S I
Sbjct:   93 AQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDI 393          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 8.810e-72
Identity = 131/303 (43.23%), Postives = 185/303 (61.06%), Query Frame = 1
Query:    7 ARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPNSAYRERMGTTPFQMITGRPPATAMSVLAGEDGDEWTVEELDVSG-----EQMYAWQEDLRRDVMKRVREQRERVRELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGE-YRVQIAWVGLEDEEPTWEPMSTI 897
            A+ +L WC + GVP+ + SD ATH    V+  +   LGV   F VAN  WS+GT ERM RE+V T +AV  ERRR   +W   + AVQWA N+AYRER  +TP+ ++ GR P T+ S LA   G+ W ++ LD +      + +   Q  L + V ++V   R R R  + RG LP F VGDYV+VARV + G   KL  TWTGPWRVV    +HV  V+  V G+ ++VHV R+  YADS L V +++++VF+ +  QG+ EM  ++++G  PA  G  Y V++ W G E++E TW+P+S I
Sbjct: 1316 AQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDI 1616          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 6.560e-53
Identity = 114/300 (38.00%), Postives = 166/300 (55.33%), Query Frame = 1
Query:    7 ARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPNSAYRERMGTTPFQMITGRPPATAMSVLAGEDGDEWTVEELDVSG-----EQMYAWQEDLRRDVMKRVREQRERVRELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMS 891
            A+ +L WC   GVP+ + SD A+H    ++  + + LGV   F VAN  WS+GT ERM REVV T +A+  E R    +W   + AVQWA N+A+RER G+TP+ ++ GR P TA+S LA   G EW V+ LD        + +   Q  L ++V+ +V+  R + R  +  G LP F VGDYV+VA                        E  HV  V+  V+GE ++VHV R+  YAD++L + AE++EVF+    QG+FEM  ++ +       G + V++ WVG + EE TWE +S
Sbjct: 1418 AQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVA-----------------------AERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELS 1693          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6A3JAA2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JAA2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.080e-34
Identity = 101/309 (32.69%), Postives = 161/309 (52.10%), Query Frame = 1
Query:    1 VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPN-SAYRERMGTTPFQMITGRPPATAMSVL---AGEDGDEWTVEELDVSGEQMYAWQEDLRRDVMKRVRE-----QRERVRELSGRGHLPL-FEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            VAA A+L W A +G+PK   SD  TH   ++++ ++SRL V   F      W +GTVER+NR+V+   RA+  E      EWP  L A+Q   N +A +   G +P ++  G P ++A+ V+   A E   E  +E  D+ G+Q+    E+LR  + +  RE     +R+R++++      P+ F+VGD+VL +R+ +     KL+  W GP++V+     H   +E  VTG   EVH  R+  YADS+L       E+ E+   QG    V      +       + + ++WVGL+  E +WEP  T+
Sbjct:  167 VAAEALLMWAARYGIPKTLLSDQGTHFRNEMMRHMASRLKVEQNFTPVYSPWLNGTVERLNRDVLQVLRALLLEYALDYHEWPYLLPALQANLNHTAVQSLAGHSPVEVFAGLPASSALDVIVAPASETNGERVIEIGDL-GDQL----ENLRASLHQMHREVTDAKERKRLQDMMTHKGTPVNFDVGDFVLWSRIDQRLPNNKLLGQWVGPFKVIEA-LPHSFKIEHLVTGRVYEVHASRLKFYADSTLNT---TDELLELASSQGMVVGVSGFLEHRFNEEFERWELLVSWVGLQAIENSWEPWDTL 466          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6G0MN46_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MN46_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.860e-34
Identity = 90/305 (29.51%), Postives = 158/305 (51.80%), Query Frame = 1
Query:    1 VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPNSAYRERMGT-TPFQMITGRPPATAMSVLAGE--DGDEWTVEELDVSGEQMYAWQEDLRRDVMKRVREQRERVR---ELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            VAA  +  WCA +G+P+   SD   H   +V++ + +RL V   F      W +GTVER+N++V+   RA+  E      EWP  L A+Q   N    + +G  +P ++ TG P ++ +  +     D D   V +    GEQ+ + ++ L  ++ K V + +ER R     + +G +  FEVGD+VL +R+ +     KL+  W GP++V+  +  H  V++  ++G   +VHV R+  YAD+ L    +  E+ E+   QG    V+ I        +  + + ++W+ L+  E +WEP++T+
Sbjct: 1088 VAAETLSMWCARYGIPEMLMSDQGAHFRNEVVKHLRARLKVEQVFSPVYTPWLNGTVERLNKDVLQVVRALLMEYALDTHEWPYLLPALQANLNHTPVQSLGDHSPVELFTGHPASSPLDTVVSHRADADPLLVVDFACVGEQLESLRDSLH-EMHKEVLDTKERKRLQDMATHKGSVVNFEVGDFVLWSRIDQRLSNNKLLGQWVGPFKVIEAKP-HSFVIQHLISGREYDVHVSRLKFYADAEL---NQTEELLELVSSQGMMLGVEAICDHLFNHTLERWELLVSWMALQAIENSWEPLTTL 1387          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6A4BC46_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BC46_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.050e-34
Identity = 106/311 (34.08%), Postives = 158/311 (50.80%), Query Frame = 1
Query:    1 VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPN-SAYRERMGTTPFQMITGRPPATAMSVL--AGEDGDEW--TVEELDVSGEQMYAWQEDLRRDVM---KRVREQRER-VRELSGRGHLPL---FEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            VAA A+L W + FGVP  + SD  +H   +VI  +S RL     F +A   W +G+VER+NR+++   +A+  E +    +WP  L  VQ + N S         P ++ TG P  +A+  +   GE G     T+++L  S EQ     + LR D+    K V+ +RER  +    R H      F VGDYVL +RV +     KL   W GP+RVV G +++   VE  + G T +VH  R+  YAD SL V     E+ +    QG    V+ I   +  + +  Y V++ W+GLE  E +WEP+ T+
Sbjct:  346 VAASAILDWYSRFGVPTVWVSDTGSHFKSKVIAELSRRLKGRQEFILAYSPWKNGSVERVNRDILQVLKALALEFKVSVHDWPYLLPLVQSSINHSPVPSLANRAPIELFTGLPCPSALDTVFFPGEKGRGRVATLDQLRPSTEQQL---DKLRADIRNMHKYVKAERERQAQRYRARPHYEQRVNFSVGDYVLRSRVDEKLHANKLRVMWVGPYRVV-GSADYYFTVEHLINGRTMDVHPSRLKMYADDSLNV---TEELIDHIASQGTLLAVEAIVEYRMNSDMRAYEVKVKWLGLETVEDSWEPLKTM 649          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6A3I112_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I112_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.910e-34
Identity = 96/301 (31.89%), Postives = 157/301 (52.16%), Query Frame = 1
Query:   25 WCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPN-SAYRERMGTTPFQMITGRPPATAMSVL---AGEDGDEWTVEELDVSGEQMYAWQEDLRRDVMKRVRE-----QRERVRELSGRGHLPL-FEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            W A +G+PK   SD  TH   ++++ +++RL V   F      W +GTVER+NR+V+   RA+  E      EWP  L A+Q   N +A +   G +P ++ TG P ++A+ V+   A E   E  +E  D+ G+Q+    E+LR  + +  RE     +R+R++++      P+ F+VGD+VL +R+ +     KL+  W GP++V+     H   +E  VTG   EVH  R+  YADS+L       E+ E+   QG    V      +       + + ++WVGL+  E +WEP+ T+
Sbjct:    2 WAARYGIPKTLLSDQGTHFRNEMMRHMAARLKVEQNFTPVYSPWLNGTVERLNRDVLQVLRALLLEYALDYHEWPYLLPALQANLNHTAVQSLAGHSPVEVFTGLPASSALDVIVAPASETNGERVIEIGDL-GDQL----ENLRASLHQMHREVTDAKERKRLQDMMTHKGTPVNFDVGDFVLWSRIDQRLPNNKLLGQWVGPFKVIEA-LPHSFKIEHLVTGRVYEVHASRLKFYADSTLNT---TDELLELASSQGMVVGVSGFLEHRFNEEFERWELLVSWVGLQAIENSWEPLHTL 293          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6A3DQC9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DQC9_9STRA)

HSP 1 Score: 140 bits (352), Expect = 9.610e-34
Identity = 91/308 (29.55%), Postives = 159/308 (51.62%), Query Frame = 1
Query:    1 VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQ----WAPNSAYRERMGTTPFQMITGRPPATAMSVLAGE--DGDEWTVEELDVSGEQMYAWQEDLRRDVMKRVREQRERVR---ELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            VAA  +  WCA +G+P+   SD   H   +V++ + +RL V   F      W +GTVER+N++V+   RA+  E      EWP  L A+Q      P  + R+    +P ++ TG P ++ +  +     D D   V +    GEQ+ + ++ L  ++ K V + +ER R     + +G +  FEVGD+VL +R+ +     KL+  W GP++V+  +  H  V++  ++G   +VHV R+  YAD+ L    +  E+ E+   QG    V+ I        +  + + ++W+GL+  E +WEP++T+
Sbjct:  341 VAAETLSMWCARYGIPEMLMSDQGAHFRNEVVKHLRARLKVEQVFSPVYTPWLNGTVERLNKDVLQVVRALLMEYALDTHEWPYLLPALQANLNHTPVQSLRDH---SPVELFTGLPASSPLDTVVSHRADADPLLVVDFACVGEQLESLRDSLH-EMHKEVLDIKERKRLQDMATHKGSVVNFEVGDFVLWSRIDQRLPNNKLLGQWVGPFKVIEAKP-HSFVIQHLISGREYDVHVSRLKFYADAEL---NQTEELLELVSSQGMMLGVEAICDHLFNHTLERWELLVSWMGLQAIENSWEPLTTL 640          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6A3J5U5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J5U5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.250e-33
Identity = 94/307 (30.62%), Postives = 158/307 (51.47%), Query Frame = 1
Query:    1 VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPNSAYRERMG-TTPFQMITGRPPATAMSVL----AGEDGDEWTVEELDVSGEQMYAWQEDLRRDVMKRVREQRERVR---ELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            VAA AVL W   +G+P  +TSD  TH    +++ +  RL V+H F +    W +GTVER+NR+++   R +  E +     W   L  VQ   N      +G   P ++ TG    T +  +    + +  D+    +L+V  ++++ W+E L+  +   V++++ER R    ++ RG L  F VGDYVL +RV +  R  KL+  W GP+RV     E   ++E  +TG+T  VH  R+  + D+S+ V     E+ E    QG    V+ I   +      ++ + ++W GL+  E +WEP+S++
Sbjct:  763 VAASAVLDWAKRYGLPAMWTSDNGTHFKNTLMENLRERLKVLHTFVLVYTPWVNGTVERLNRDILQVMRVLLLEYQLDTKSWEYLLPLVQANLNQTPVASLGGKAPLELFTGLQVPTQLDTMLIPRSMQTKDKLMTIDLEVVEDELHEWRESLQA-MHAEVKDRKERTRLYQSMAKRGKLENFTVGDYVLWSRVDERLRGNKLMVRWVGPYRVTEAR-EFSFMIEHLLTGDTLGVHGSRLKFFDDASMEVN---EEILEHVSKQGIVMAVEQIREHRYNNVAQQWELLVSWRGLQYVEDSWEPLSSL 1064          
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Match: A0A6G0K007_9STRA (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6G0K007_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.230e-33
Identity = 102/308 (33.12%), Postives = 161/308 (52.27%), Query Frame = 1
Query:    1 VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANVSWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPN-SAYRERMGTTPFQMITGRPPATAMS--VLAGEDGDEWTVE----ELDVSGEQMYAWQEDLRRDVMKRVREQRERVRELSGRGH-LPL-FEVGDYVLVARVWKPGRVRKLIQTWTGPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVFEMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI 897
            VAA A+L W + FG+P  + SD  +H T +VI  ++ RL     F +A   W +G+VER+NR+++   +A+  E +   ++WP  L  VQ + N S  +      P ++ TG P    +   VL G+     ++     +LD    Q+ A  + + + V K VRE R+ +R  S R +  P+ F +GDYVL +RV +     KL  TW GP+RV  G  E+   VE  VT ++  VH  R+  YADSSL V AE+    +    QG    V+ +   +    +  + +++ W GLE+ E +WEP+ +I
Sbjct:  227 VAAAAILDWHSRFGIPPTWVSDSGSHFTSKVIGELNRRLKAQQKFTLAYTPWKNGSVERVNRDIIQVLKALILEFKVSAADWPYLLPLVQSSINHSPVQSLANKAPIKLFTGLPCPNILDTVVLPGKKARLVSLPKERPDLDNKLRQLRASLKVMHKAV-KEVRE-RQALRYRSRRHYEQPVNFSIGDYVLRSRVDEKLHANKLSVTWVGPYRVT-GAIEYYFTVEHLVTRKSTNVHPSRLKHYADSSLNVSAEL---IDHVAPQGTLLAVEALVDHRYNTSMKMFEIKVKWQGLEEVEDSWEPLKSI 528          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13430.2435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE4.520e-7743.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE8.810e-7243.23Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE6.560e-5338.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3JAA2_9STRA1.080e-3432.69Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6G0MN46_9STRA2.860e-3429.51RNA-directed DNA polymerase n=1 Tax=Phytophthora f... [more]
A0A6A4BC46_9STRA3.050e-3434.08Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A6A3I112_9STRA3.910e-3431.89Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3DQC9_9STRA9.610e-3429.55Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A6A3J5U5_9STRA1.250e-3330.62Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A6G0K007_9STRA3.230e-3333.12Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13430contigH-elongata_contig13430:4013..4930 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score133.3
Seed ortholog evalue1.9e-28
Seed eggNOG ortholog164328.Phyra75602
EggNOG free text desc.Chromo (CHRromatin Organisation MOdifier) domain
EggNOG OGs3QGZ1@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons2
Model size897
Cds size897
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929798.0248399-CDS-H-elongata_contig13430:4012..44441622929798.0248399-CDS-H-elongata_contig13430:4012..4444Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13430 4013..4444 +
1691679161.5193825-CDS-H-elongata_contig13430:4012..44441691679161.5193825-CDS-H-elongata_contig13430:4012..4444Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13430 4013..4444 +
1622929798.0433006-CDS-H-elongata_contig13430:4465..49301622929798.0433006-CDS-H-elongata_contig13430:4465..4930Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13430 4466..4930 +
1691679161.5350027-CDS-H-elongata_contig13430:4465..49301691679161.5350027-CDS-H-elongata_contig13430:4465..4930Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13430 4466..4930 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13430.2435.1prot_H-elongata_contig13430.2435.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13430 4013..4930 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13430.2435.1

>prot_H-elongata_contig13430.2435.1 ID=prot_H-elongata_contig13430.2435.1|Name=mRNA_H-elongata_contig13430.2435.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=299bp
VAARAVLKWCASFGVPKAFTSDGATHLTGQVIQMVSSRLGVVHYFGVANV
SWSHGTVERMNREVVNTFRAVFSERRRPPSEWPLALGAVQWAPNSAYRER
MGTTPFQMITGRPPATAMSVLAGEDGDEWTVEELDVSGEQMYAWQEDLRR
DVMKRVREQRERVRELSGRGHLPLFEVGDYVLVARVWKPGRVRKLIQTWT
GPWRVVPGESEHVRVVEETVTGETQEVHVVRMHPYADSSLVVGAEVREVF
EMTKHQGKFEMVDVISVGKDPARVGEYRVQIAWVGLEDEEPTWEPMSTI
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mRNA from alignment at H-elongata_contig13430:4013..4930+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13430.2435.1 ID=mRNA_H-elongata_contig13430.2435.1|Name=mRNA_H-elongata_contig13430.2435.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=918bp|location=Sequence derived from alignment at H-elongata_contig13430:4013..4930+ (Himanthalia elongata Himel1 dioecious)
GTGGCGGCGCGTGCCGTGCTGAAATGGTGTGCTTCGTTTGGGGTGCCCAA GGCGTTCACCAGTGATGGTGCGACGCATTTGACCGGGCAAGTGATACAGA TGGTGTCGTCACGATTGGGGGTGGTTCACTATTTTGGTGTGGCGAATGTT TCGTGGTCGCACGGGACGGTTGAAAGGATGAACCGTGAAGTTGTGAATAC GTTCCGTGCGGTCTTCAGCGAAAGGCGTCGGCCCCCGAGCGAGTGGCCGT TGGCGTTGGGGGCTGTACAATGGGCTCCCAATTCGGCGTATCGGGAGCGC ATGGGGACGACGCCATTTCAGATGATAACAGGTCGACCTCCTGCGACGGC AATGTCGGTGCTTGCAGGGGAAGATGGTGACGAGTGGACTGTGGAAGAGT TAGACGTGTCGGGCGAGCAAATGTACGCCTGGGTCGCTGGTTGGGTTTGA GAGCAGGAAGACTTGCGGCGTGACGTGATGAAGCGCGTTCGTGAGCAGCG TGAGCGTGTCCGAGAGCTGAGCGGCCGTGGACACTTGCCATTGTTTGAGG TTGGCGATTATGTCTTGGTGGCTCGGGTGTGGAAACCGGGACGTGTGCGT AAGCTTATACAGACGTGGACTGGACCGTGGCGTGTTGTGCCTGGAGAATC AGAGCATGTTCGTGTAGTGGAGGAAACTGTCACAGGGGAAACCCAGGAAG TGCACGTGGTGCGGATGCATCCGTATGCTGATTCGTCTCTGGTTGTGGGG GCAGAGGTCCGCGAAGTGTTTGAAATGACCAAGCACCAGGGAAAGTTCGA GATGGTCGACGTGATCAGTGTTGGTAAAGATCCGGCGCGAGTAGGAGAAT ACCGGGTGCAGATCGCGTGGGTTGGTCTAGAGGATGAGGAGCCAACGTGG GAACCGATGTCAACTATC
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Coding sequence (CDS) from alignment at H-elongata_contig13430:4013..4930+

>mRNA_H-elongata_contig13430.2435.1 ID=mRNA_H-elongata_contig13430.2435.1|Name=mRNA_H-elongata_contig13430.2435.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at H-elongata_contig13430:4013..4930+ (Himanthalia elongata Himel1 dioecious)
GTGGCGGCGCGTGCCGTGCTGAAATGGTGTGCTTCGTTTGGGGTGCCCAA
GGCGTTCACCAGTGATGGTGCGACGCATTTGACCGGGCAAGTGATACAGA
TGGTGTCGTCACGATTGGGGGTGGTTCACTATTTTGGTGTGGCGAATGTT
TCGTGGTCGCACGGGACGGTTGAAAGGATGAACCGTGAAGTTGTGAATAC
GTTCCGTGCGGTCTTCAGCGAAAGGCGTCGGCCCCCGAGCGAGTGGCCGT
TGGCGTTGGGGGCTGTACAATGGGCTCCCAATTCGGCGTATCGGGAGCGC
ATGGGGACGACGCCATTTCAGATGATAACAGGTCGACCTCCTGCGACGGC
AATGTCGGTGCTTGCAGGGGAAGATGGTGACGAGTGGACTGTGGAAGAGT
TAGACGTGTCGGGCGAGCAAATGTACGCCTGGGTGGCGGCGCGTGCCGTG
CTGAAATGGTGTGCTTCGTTTGGGGTGCCCAAGGCGTTCACCAGTGATGG
TGCGACGCATTTGACCGGGCAAGTGATACAGATGGTGTCGTCACGATTGG
GGGTGGTTCACTATTTTGGTGTGGCGAATGTTTCGTGGTCGCACGGGACG
GTTGAAAGGATGAACCGTGAAGTTGTGAATACGTTCCGTGCGGTCTTCAG
CGAAAGGCGTCGGCCCCCGAGCGAGTGGCCGTTGGCGTTGGGGGCTGTAC
AATGGGCTCCCAATTCGGCGTATCGGGAGCGCATGGGGACGACGCCATTT
CAGATGATAACAGGTCGACCTCCTGCGACGGCAATGTCGGTGCTTGCAGG
GGAAGATGGTGACGAGTGGACTGTGGAAGAGTTAGACGTGTCGGGCGAGC
AAATGTACGCCTGGCAGGAAGACTTGCGGCGTGACGTGATGAAGCGCGTT
CGTGAGCAGCGTGAGCGTGTCCGAGAGCTGAGCGGCCGTGGACACTTGCC
ATTGTTTGAGGTTGGCGATTATGTCTTGGTGGCTCGGGTGTGGAAACCGG
GACGTGTGCGTAAGCTTATACAGACGTGGACTGGACCGTGGCGTGTTGTG
CCTGGAGAATCAGAGCATGTTCGTGTAGTGGAGGAAACTGTCACAGGGGA
AACCCAGGAAGTGCACGTGGTGCGGATGCATCCGTATGCTGATTCGTCTC
TGGTTGTGGGGGCAGAGGTCCGCGAAGTGTTTGAAATGACCAAGCACCAG
GGAAAGTTCGAGATGGTCGACGTGATCAGTGTTGGTAAAGATCCGGCGCG
AGTAGGAGAATACCGGGTGCAGATCGCGTGGGTTGGTCTAGAGGATGAGG
AGCCAACGTGGGAACCGATGTCAACTATCCAGGAAGACTTGCGGCGTGAC
GTGATGAAGCGCGTTCGTGAGCAGCGTGAGCGTGTCCGAGAGCTGAGCGG
CCGTGGACACTTGCCATTGTTTGAGGTTGGCGATTATGTCTTGGTGGCTC
GGGTGTGGAAACCGGGACGTGTGCGTAAGCTTATACAGACGTGGACTGGA
CCGTGGCGTGTTGTGCCTGGAGAATCAGAGCATGTTCGTGTAGTGGAGGA
AACTGTCACAGGGGAAACCCAGGAAGTGCACGTGGTGCGGATGCATCCGT
ATGCTGATTCGTCTCTGGTTGTGGGGGCAGAGGTCCGCGAAGTGTTTGAA
ATGACCAAGCACCAGGGAAAGTTCGAGATGGTCGACGTGATCAGTGTTGG
TAAAGATCCGGCGCGAGTAGGAGAATACCGGGTGCAGATCGCGTGGGTTG
GTCTAGAGGATGAGGAGCCAACGTGGGAACCGATGTCAACTATC
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