prot_H-elongata_contig134273.2431.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig134273.2431.1
Unique Nameprot_H-elongata_contig134273.2431.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A8J6DDM6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DDM6_9ROSI)

HSP 1 Score: 66.2 bits (160), Expect = 8.650e-11
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    2 DGRIEKYKCRLVAQG-----------------SKTSIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            DGRI++YK RLVA+G                    +IR++L + A L W   QLDV  A+L  E+ E++Y++ P  + +S+ QV  LKK++YGL  +   W
Sbjct:  400 DGRIDRYKARLVAKGFTQTYGLDYDETFAPVAKLNTIRVLLSLAANLDWHLTQLDVKNAFLNGELNEEVYIDFPPGFEESKGQVCKLKKSLYGLKQSPRAW 500          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A8H5CKW0_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus confluens TaxID=206315 RepID=A0A8H5CKW0_9AGAR)

HSP 1 Score: 57.0 bits (136), Expect = 1.580e-7
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    2 DGRIEKYKCRLVAQGSKT-SIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            DG+I +YK RLVA+  +  ++R+++ + A     A  +DV  AYL  ++ E+IY+  PE Y D   +V  L++++YGL  AG +W
Sbjct:  955 DGKIIRYKARLVAKVVRMETVRLLISIAARYKLRAHVVDVIGAYLNGKLDEEIYMTQPECYEDGTTRVCKLERSLYGLKQAGRVW 1039          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 55.1 bits (131), Expect = 7.200e-7
Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 0
Query:   14 AQGSKTSIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            A  S  SIR+ L +  A G+   QLDVD A+L A++ ED+Y+E PE  +    +V  L KA+YGL  AG  W
Sbjct:   80 AVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAW 151          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A0P1AHI5_PLAHL (Polyprotein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHI5_PLAHL)

HSP 1 Score: 53.5 bits (127), Expect = 7.290e-7
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   20 SIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            SIR+VL ++AA+G+   QLDVD A+L  ++ E++Y+E+P +  ++   +  L KA+YGL  A   W
Sbjct:    3 SIRVVLAVVAAMGYVTEQLDVDTAFLNGKLKEEVYMEVPHSIVNATNMMCKLDKAIYGLRQAASAW 68          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: UPI0006A6E8A3 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6E8A3)

HSP 1 Score: 54.3 bits (129), Expect = 1.320e-6
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   20 SIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAY--RDSRRQVGLLKKAMYGLVHAGLLW 84
            ++R+VLG   A GW  RQLDV+ A+L+  + ED+Y+  P  +  RD    V  L+KA+YGL  A   W
Sbjct:   74 TVRLVLGQAVARGWSLRQLDVNNAFLQGNLNEDVYIAQPAGFVDRDKPHYVCKLRKALYGLKQAPRAW 141          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A8H7HK67_9AGAM (Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7HK67_9AGAM)

HSP 1 Score: 54.3 bits (129), Expect = 1.340e-6
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   20 SIRMVLGMIAALGWEARQLDVDMAYLEAEVE-DIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            SIRM++ +     W+ +QLDV++AYL AEV+ D+Y++    + D   +V  LK+++YGL  AG +W
Sbjct:  341 SIRMLVSIANQYNWDIQQLDVNLAYLHAEVDKDLYMQQIPYFSDGTNKVLKLKQSIYGLKQAGQMW 406          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A834VUE0_9PLEO (Integrase catalytic domain-containing protein n=9 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=A0A834VUE0_9PLEO)

HSP 1 Score: 54.3 bits (129), Expect = 1.420e-6
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0
Query:    2 DGRIEKYKCRLVAQGSKTS--------------IRMVLGMIAALGWEARQLDVDMAYLEAEVED-IYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            DG + KYK RLV +G                   R ++ + AA G +A Q DV  A+L A +E  +YV+ P+ Y +   ++  LK+A+YGL  A LLW
Sbjct: 1016 DGLLYKYKARLVVRGDLQEDWGDTYAATLAARVFRFLMALTAAFGLKAYQYDVLNAFLNAPLEKLVYVQTPDPYVEELGKILELKRALYGLKDAPLLW 1113          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A2N9GUB1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GUB1_FAGSY)

HSP 1 Score: 53.9 bits (128), Expect = 1.820e-6
Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   19 TSIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAYRDSRRQVGLLKKAMYGLVHAG 81
            TS+R +L + A   W   Q+DV  A+L  ++ E++Y++ P  Y DS+ QV  L++A+YGL HAG
Sbjct:  122 TSVRSLLAVAAVRHWPLFQMDVKNAFLNGDLLEEVYMQPPPGYPDSQNQVCHLRRALYGLKHAG 185          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: A0A8J6D396_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D396_9ROSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.550e-6
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   20 SIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW 84
            +IR++L + A L W   QLDV  A+L  E+ E++Y++ P  + +S+ QV  LKK++YGL  +   W
Sbjct:  883 TIRVLLSLAANLDWHLTQLDVKNAFLNGELSEEVYMDFPPGFEESKGQVCKLKKSLYGLKQSPRAW 948          
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Match: UPI001C659808 (hypothetical protein n=1 Tax=Bacillus sp. SRB_331 TaxID=1969379 RepID=UPI001C659808)

HSP 1 Score: 51.2 bits (121), Expect = 3.890e-6
Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   20 SIRMVLGMIAALGWEARQLDVDMAYLEAEV-EDIYVELPEAY-RDSRRQVGLLKKAMYGLVHAGLLW 84
            S+R++  + A+L    RQLDV  A+L+AE+ E+IY+  PE +  +  + V  LKK++YGL  AGL+W
Sbjct:   60 SVRIIFALAASLNLTLRQLDVVGAFLQAELPEEIYMVQPEGFISEDPKLVCRLKKSLYGLKQAGLVW 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134273.2431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6DDM6_9ROSI8.650e-1136.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H5CKW0_9AGAR1.580e-737.65Uncharacterized protein n=1 Tax=Gymnopus confluens... [more]
A0A8K1CTN1_PYTOL7.200e-744.44Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A0P1AHI5_PLAHL7.290e-740.91Polyprotein n=1 Tax=Plasmopara halstedii TaxID=478... [more]
UPI0006A6E8A31.320e-642.65uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A8H7HK67_9AGAM1.340e-640.91Reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A834VUE0_9PLEO1.420e-635.71Integrase catalytic domain-containing protein n=9 ... [more]
A0A2N9GUB1_FAGSY1.820e-642.19Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A8J6D396_9ROSI3.550e-639.39Integrase catalytic domain-containing protein n=1 ... [more]
UPI001C6598083.890e-643.28hypothetical protein n=1 Tax=Bacillus sp. SRB_331 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 19..84
e-value: 8.6E-10
score: 38.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig134273contigH-elongata_contig134273:132..386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig134273.2431.1mRNA_H-elongata_contig134273.2431.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig134273 3..458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig134273.2431.1 ID=prot_H-elongata_contig134273.2431.1|Name=mRNA_H-elongata_contig134273.2431.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MDGRIEKYKCRLVAQGSKTSIRMVLGMIAALGWEARQLDVDMAYLEAEVE
DIYVELPEAYRDSRRQVGLLKKAMYGLVHAGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2