prot_H-elongata_contig13424.2427.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13424.2427.1
Unique Nameprot_H-elongata_contig13424.2427.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: D7FKD9_ECTSI (MutS protein homolog 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD9_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.280e-19
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            MR LE+AL+  E ALHAAA+  AELDAA++LASVA DFGFVRPEVVEDNVI+IKNGRHPLQ
Sbjct:  354 MRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQ 414          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: A0A1X7UDR7_AMPQE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UDR7_AMPQE)

HSP 1 Score: 57.8 bits (138), Expect = 3.150e-8
Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            M  L+  L+E   AL +    T ELD  +S++ +A +  FV+PE+ EDNVI IKNGRHPLQ
Sbjct:  518 MHRLQSVLMEHSGALISVIECTTELDCLVSMSKLAKEHNFVKPELTEDNVIYIKNGRHPLQ 578          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: V4AGJ6_LOTGI (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AGJ6_LOTGI)

HSP 1 Score: 57.4 bits (137), Expect = 4.300e-8
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            M  L+  +LE    L+     TAELD  MSL++ A +FG+++PE+VEDN+I ++ GRHP+Q
Sbjct:  498 MHRLQNTILEHSKVLNDVMEYTAELDCLMSLSTCAREFGYIKPEMVEDNIIDVEGGRHPIQ 558          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: A0A812CKN8_SEPPH (MSH5 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812CKN8_SEPPH)

HSP 1 Score: 54.3 bits (129), Expect = 5.170e-7
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            M  L++ +LE  A L      TAELD  M+ A  A +FG+V+P + E+NVI IKNGRHPLQ
Sbjct:   89 MHRLQDTVLEHSAVLSHVMEHTAELDCLMAFAQSAREFGYVQPILNENNVIEIKNGRHPLQ 149          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: W7TMA2_9STRA (Mismatch repair protein 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMA2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.270e-7
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            +R L E +L+ E AL  A  A AELD  M+ A +A    +VRP V E+ V+++K+GRHPLQ
Sbjct:  542 LRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQ 602          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: A0A4D9D1J2_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1J2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 7.160e-7
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            +R L E +L+ E AL  A  A AELD  M+ A +A    +VRP V E+ V+++K+GRHPLQ
Sbjct:  245 LRQLAEEILKEEIALTEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQ 305          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: A0A0K1PAY7_9DELT (DNA mismatch repair protein MutS n=2 Tax=Vulgatibacter incomptus TaxID=1391653 RepID=A0A0K1PAY7_9DELT)

HSP 1 Score: 52.4 bits (124), Expect = 2.520e-6
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    8 LLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPL 60
            +LER AA+ AAA A A  DA +SLA VA++ G+VRPEV E +V+ I  GRHP+
Sbjct:  551 ILERAAAIKAAAGAIAVGDALLSLARVAAELGYVRPEVDEGDVLEIVEGRHPV 603          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: D8R9G5_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R9G5_SELML)

HSP 1 Score: 52.0 bits (123), Expect = 3.420e-6
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            ++ LE  + + E A+  +A  TA+LD  +S+A  A ++ + RP +VED+++IIKNGRHPLQ
Sbjct:  213 LKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQ 273          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: D8SEG8_SELML (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SEG8_SELML)

HSP 1 Score: 52.0 bits (123), Expect = 3.420e-6
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            ++ LE  + + E A+  +A  TA+LD  +S+A  A ++ + RP +VED+++IIKNGRHPLQ
Sbjct:  213 LKELESKVQKYEPAVRYSADLTAQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQ 273          
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Match: A0A165TT55_9APHY (Uncharacterized protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165TT55_9APHY)

HSP 1 Score: 51.6 bits (122), Expect = 4.730e-6
Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    1 MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNVIIIKNGRHPLQ 61
            ++AL E +L    A+  A    AELD  +S A  ++   F+RP +VEDN+I IK GRHPLQ
Sbjct:  556 VQALSERILHHAEAMQHACDVCAELDCLLSFAEASATSNFIRPRMVEDNIIDIKQGRHPLQ 616          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13424.2427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKD9_ECTSI1.280e-1978.69MutS protein homolog 5 n=1 Tax=Ectocarpus siliculo... [more]
A0A1X7UDR7_AMPQE3.150e-849.18DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
V4AGJ6_LOTGI4.300e-845.90DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A812CKN8_SEPPH5.170e-750.82MSH5 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
W7TMA2_9STRA5.270e-747.54Mismatch repair protein 5 n=1 Tax=Nannochloropsis ... [more]
A0A4D9D1J2_9STRA7.160e-747.54DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A0K1PAY7_9DELT2.520e-656.60DNA mismatch repair protein MutS n=2 Tax=Vulgatiba... [more]
D8R9G5_SELML3.420e-644.26DNA_MISMATCH_REPAIR_2 domain-containing protein (F... [more]
D8SEG8_SELML3.420e-644.26DNA_MISMATCH_REPAIR_2 domain-containing protein (F... [more]
A0A165TT55_9APHY4.730e-645.90Uncharacterized protein n=1 Tax=Daedalea quercina ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13424contigH-elongata_contig13424:142..558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13424.2427.1mRNA_H-elongata_contig13424.2427.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13424 142..824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13424.2427.1 ID=prot_H-elongata_contig13424.2427.1|Name=mRNA_H-elongata_contig13424.2427.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MRALEEALLEREAALHAAAAATAELDAAMSLASVASDFGFVRPEVVEDNV
IIIKNGRHPLQ
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