prot_H-elongata_contig134047.2418.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig134047.2418.1
Unique Nameprot_H-elongata_contig134047.2418.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
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BLAST of mRNA_H-elongata_contig134047.2418.1 vs. uniprot
Match: A0A6H5KY59_9PHAE (DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY59_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.120e-32
Identity = 74/139 (53.24%), Postives = 90/139 (64.75%), Query Frame = 0 
Query:    1 ASPEFELITVARDHTEYVCTIMIGPKDRVKGHGRATNMKAARQEASRMLLKAREGRWGWGGACQCNAAIAWNEENPEDPIDMETMEVAPYTAPNKRMKAQ-EEITEEFKAYVAAWVDKVVLGEIDEACFSGVLDKQQRK 138
            A  ++E IT      EY+CTI +GP+DR+ G GRA N+KAA+Q+ASR LL               NAA+AWNEENPED IDMETM   P  A +K+ KA   EITEEFKAY AAWVDKVV  ++ EACF   + K +RK
Sbjct:  368 APADYEQITGEDGQAEYLCTISVGPEDRIVGRGRAPNIKAAKQQASRELLT--------------NAALAWNEENPEDLIDMETMVPLPDEAVSKKSKAAVTEITEEFKAYCAAWVDKVVSEDVHEACFPDGIGKGERK 492
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134047.2418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY59_9PHAE1.120e-3253.24DRBM domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig134047contigH-elongata_contig134047:98..1635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig134047.2418.1mRNA_H-elongata_contig134047.2418.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig134047 98..1635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig134047.2418.1 ID=prot_H-elongata_contig134047.2418.1|Name=mRNA_H-elongata_contig134047.2418.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
ASPEFELITVARDHTEYVCTIMIGPKDRVKGHGRATNMKAARQEASRMLL
KAREGRWGWGGACQCNAAIAWNEENPEDPIDMETMEVAPYTAPNKRMKAQ
EEITEEFKAYVAAWVDKVVLGEIDEACFSGVLDKQQRKVRVVWFL*
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