mRNA_H-elongata_contig13404.2417.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: A0A6H5KR71_9PHAE (AAA_28 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KR71_9PHAE) HSP 1 Score: 410 bits (1054), Expect = 3.040e-138 Identity = 211/350 (60.29%), Postives = 254/350 (72.57%), Query Frame = 3
Query: 39 LFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILP--------------------EIDVPASR-ISSESFLEKRGR--QGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPAYGTSVLYRRSESGELSLPPFLAVDE 1019
+FTNG+ L + + RFAFQWSILSLQ+ LEDGFER AR G+PSIL CDRGLMDGSVYMPPEEW +LV+ N +DE LRDGRYD ILHLVTAACGAEE+YS +NNEARSE+ ++ARDVD +T VWLGHPRH +FDNSTDFE K+ R+T+ SRLVGLPCRPRKL KFLL +PPP EEFP V+ F EKV+L +D E G +P +DVPA+ +SSESFLEKRG+ +FV +TTI+++ DGTV EVTR+LSA +A++E ER D AR KV Q RV FLW Q FEL TD++PA+G +VL+RRSE GELSLP FL VD+
Sbjct: 1 MFTNGVGFQDLGEKAKRFAFQWSILSLQMNLEDGFERFARACGQPSILLCDRGLMDGSVYMPPEEWDSLVEGNSMDERSLRDGRYDGILHLVTAACGAEEHYSLENNEARSESVEMARDVDGRTEGVWLGHPRHLVFDNSTDFEAKMSRITSAASRLVGLPCRPRKLCKFLLFEPPPPLEEFPVPVKEFHAEKVFLVGRDTAEAGESGFMTVPADTSGGDASGEXXXXXXXXXHVDVPAAVCVSSESFLEKRGKTKSEVFVYSITTISTFSDGTVTEVTRQLSAARHASIEKERADPARPKVIQRRVCFLWERQVFELHTDMEPAFGINVLHRRSEGGELSLPTFLKVDD 350
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: I2CP47_NANGC (AAA_28 domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP47_NANGC) HSP 1 Score: 263 bits (672), Expect = 5.040e-79 Identity = 153/346 (44.22%), Postives = 212/346 (61.27%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISL-DALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSE-SFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFEL---QTDVKPAYGTSV--LYRRSESGELSLPPFLAVDE 1019
F+VFTVPEAAT+L++NG++L D L ++ FQ ++L QI LEDG ER+AR+ G+PS++ CDRG +DG+ Y+ E W LVK GL+ L +R+GRYDAI HLVTAA GAE +YS NN R+E+ + AR+VD KT VW GHPRH++ DNSTDFEGKL RV +RLVGLP PR ++ L + P P+ F E +V KVYL + G LP+ ++S E +++E+R + G T+ DDG E+ R + A E+ + D +R++V+Q R SFLWA QAF + +D K +G + L R+++ G PPFL V E
Sbjct: 127 FRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKELWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKP-KPDSFTVPFEKTQVRKVYLM--NVGRP-------LPD----GRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHSDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGE 458
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: A0A4D9CZL1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZL1_9STRA) HSP 1 Score: 261 bits (667), Expect = 6.940e-78 Identity = 152/346 (43.93%), Postives = 211/346 (60.98%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISL-DALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSE-SFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFEL---QTDVKPAYGTSV--LYRRSESGELSLPPFLAVDE 1019
F+VFTVPEAAT+L++NG++L D L ++ FQ ++L QI LEDG ER+AR+ G+PS++ CDRG +DG+ Y+ + W LVK GL+ L +R+GRYDAI HLVTAA GAE +YS NN R+E+ + AR+VD KT VW GHPRH++ DNSTDFEGKL RV +RLVGLP PR ++ L + P P+ F E +V KVYL + G LP+ ++S E +++E+R + G T+ DDG E+ R + A E+ + D +R++V+Q R SFLWA QAF + D K +G + L R+++ G PPFL V E
Sbjct: 152 FRVFTVPEAATTLWSNGVALADILGSNETQYWFQDAVLDFQIHLEDGMERIARSLGRPSVILCDRGTLDGAAYVSKDLWEELVKKKGLELLSIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLPRGADRWFLRKKP-KPDSFTVPFEKTQVRKVYLM--NVGRP-------LPD----GRKVSVEYNYVEERSQDGSVAYAHTSKQRLDDGHEAELKRIIDAREFYSRSTTMADPSRKEVFQTRYSFLWAQQAFVVIHHHLDAKTKFGPELFTLRRQAKGGIPEFPPFLDVGE 483
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: A0A5D6YST2_9STRA (AAA_28 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YST2_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.660e-72 Identity = 145/343 (42.27%), Postives = 198/343 (57.73%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSESFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPAY--GTSVLYRRS---ESGELSLPPFLAVD 1016
F+V+ VPEA+T L T G L++T FQW IL LQ++LED F +A+ SGKP ++ CDRG+MDGS YM PE+W L + LD + LRD RY AI HLVTAA GAE++YS DNN R EN + AR++D +T W+GHP+ F+FDN+T FEGK+ R+ T + L G+P + KFLLA+ P S + P E FEVEKVYL PE A SF+ R + G+ MTT+ G V + R LSA EY+ R D R+ + Q R+ FL+ NQ+F++ +P G +VL ++ +S +S P FLA++
Sbjct: 66 FRVYVVPEASTLLQTGGAFFLDLKETDI-LNFQWQILKLQMSLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMSPEQWEELKTQHDLDTVTLRDTRYIAIFHLVTAASGAEKFYSLDNNGIRIENIEQAREIDARTCRAWIGHPKLFVFDNTTGFEGKMQRLVDTAANLCGVPTTLKASRKFLLAKAPES-SDIPFHHEDFEVEKVYLT---------------PES---AETSKDYSFVRCRSQYGIPAYGMTTVRYLQTGDAVHLKRILSAREYSYAVRHRNDPTREVIKQQRICFLYNNQSFQVHVYKEPGSMAGQAVLQVQASGDKSETISFPSFLAIE 388
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: A0A0P1A8H1_PLAHL (Isoform b n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8H1_PLAHL) HSP 1 Score: 243 bits (621), Expect = 2.880e-72 Identity = 145/344 (42.15%), Postives = 201/344 (58.43%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSESFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPA--YGTSVLYRRSE---SGELSLPPFLAVDE 1019
F+V+ VPEA+T L T G LQ+ FQW ILSLQI+LED F +A SGKP ++ CDRG+MDGS YM PE+W L + LD + LRD RY AI HLVTAA GAE++YS +NN R E+ + AR +DK+T W+GHP+ ++FDNST FEGK+ R+ T +RL G+P + K+LLA+ +P P E FEVEKVYL+ PE A + SF+ R + G+ MTT+ D G VV + R LSA EY+ R D R + Q R+ FL+ NQ+F++ +PA G S+L+ ++ ++ +P FL +++
Sbjct: 64 FRVYVVPEASTLLQTGGAFFLDLQEKDI-LNFQWQILSLQISLEDSFHSLALDSGKPCVILCDRGVMDGSAYMTPEQWEILKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIEEARAIDKRTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAARLCGIPSTVKASRKYLLAK---APVVIPFHHEDFEVEKVYLK---------------PEA---AKSSNDYSFVRCRSQYGIPAYGMTTVRYLDTGDVVHLKRVLSAREYSFAIKHRSDPTRNVIKQQRMCFLYENQSFQIHVYKEPADLVGLSILHVQASCKNDQDIVMPLFLNIEK 385
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: D0MYW5_PHYIT (AAA_28 domain-containing protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0MYW5_PHYIT) HSP 1 Score: 240 bits (613), Expect = 4.800e-71 Identity = 146/345 (42.32%), Postives = 204/345 (59.13%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSE-SFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPAY--GTSVLYRRSE---SGELSLPPFLAVDE 1019
F+V+ VPEA+T L T G LQ+ FQW ILSLQI+LED F +A+ SGKP ++ CDRG+MDGS YM PE+W L + LD + LRD RY AI HLVTAA GAE++YS +NN R E+ + AR +D++T W+GHP+ ++FDNST FEGK+ R+ T + L G+P R K+LLA+ +P E P E FEVEKVYL+ PE A++ S + SF+ R + G+ MTT+ D G V + R LSA EY+ R D R + Q R+ FL+ NQ+F++ +PA G +VL+ ++ ++ +P FL V++
Sbjct: 67 FRVYVVPEASTLLQTGGAFFLDLQEKDI-LNFQWQILSLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRDTRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDERTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGVPTTVRASRKYLLAK---TPIEIPFHHEDFEVEKVYLK---------------PE----AAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRCDPTRNVIKQQRMCFLYKNQSFQIHVYKEPASVAGLAVLHVQASCENDQDIVMPSFLNVEK 388
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: K3WRS4_GLOUD (AAA_28 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS4_GLOUD) HSP 1 Score: 238 bits (608), Expect = 2.570e-70 Identity = 143/344 (41.57%), Postives = 195/344 (56.69%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSESFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPAY--GTSVLYRRSESGE----LSLPPFLAVD 1016
F+V+ VPEA+T L T G L++T FQW IL LQ++LED F +A+ SGKP ++ CDRG+MDGS YM E+W L + LD + LRD RY AI HLVTAA GAE++YS DNN R E+ + AR++D +T W+GHP+ ++FDNST FEGK+ R+ T + L G+P + KFLLA PP S P E FEVEKVYL PE A SF+ R + G+ MTT+ G V + R LSA EY+ R D R + Q R+ FL+ NQ+F++ +PA G ++L+ ++ +SLP FL ++
Sbjct: 66 FRVYVVPEASTLLQTGGAFFLDLKETDI-LNFQWQILKLQMSLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTSEQWEELKAQHDLDTVTLRDTRYIAIFHLVTAAEGAEKFYSLDNNGIRIESIEQAREIDARTCRAWIGHPKLYVFDNSTGFEGKMQRLVDTAAGLCGIPTTLKASRKFLLASPPSS---IPFHHEDFEVEKVYLT---------------PES---AETSKDYSFVRCRSQYGIPAYGMTTVRYLQTGDAVHLKRILSAREYSYAVRHRNDPTRDVIKQQRMCFLYNNQSFQIHVYKEPASMAGLAILHVQASGDNSADTISLPSFLNIE 387
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: W4FWI6_9STRA (AAA_28 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWI6_9STRA) HSP 1 Score: 236 bits (601), Expect = 2.060e-69 Identity = 142/344 (41.28%), Postives = 189/344 (54.94%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSESFLEKRGRQGLFVLEMTTITSYDDGTV-VEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPAY--GTSVLYRRSESGE--LSLPPFLAVDE 1019
F+V+ VPEA+T L T G + L+ T FQW ILS QIALED F +A+ + P ++ CDRG MDGS YM P++W L + LD + LRD RY+A+ HLVTAA GAE YYS +NN RSE A D D + W+GHP+ F+FDNST FE K+ R+ +T + L GLP + K+LL PPS +P VE FEVEKVYL +LP D F+ R + GL MTT+ +D V + R LSA EY R DH R + Q R+ FLW NQ+F + +PA +++ ++ E +S+P FL + E
Sbjct: 67 FRVYMVPEASTLLQTGGAYVMDLKATDV-LNFQWQILSTQIALEDAFMSLAKDTNCPCVILCDRGAMDGSAYMSPDQWEELKVLHDLDTVTLRDTRYNAVFHLVTAANGAESYYSLENNSTRSETLQQAIDADNRLCHAWVGHPKFFVFDNSTGFESKMQRLISTAANLTGLPSTVKTAKKYLLTSLPPS---WPIHVEEFEVEKVYLS-------------VLPTTD---EGTKDYDFVRCRTQYGLPSYGMTTVRYLEDSDEPVHLKRVLSAREYGYAVRHRKDHTRLVIKQRRICFLWNNQSFNIHWYKEPASIANQGIVHVQASDSETPVSIPDFLDISE 390
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: A0A484EE22_BRELC (AAA_28 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE22_BRELC) HSP 1 Score: 234 bits (596), Expect = 1.450e-68 Identity = 142/343 (41.40%), Postives = 200/343 (58.31%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSE-SFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPAY--GTSVLYRRSE---SGELSLPPFLAV 1013
F+V+ VPEA+T L T G LQ+ FQW ILSLQI+LED F +A+ SGKP ++ CDRG+MDGS YM PE+W L + LD + LRD RY AI HLVTAA GAE++YS +NN R E+ + AR D++T W+GHP+ ++FDNST FEGK+ R+ T + L G+P + K+LLA+P E P E FEVEKVYL+ PE A++ S + SF+ R + G+ MTT+ + G VV + R LSA +Y+ R D R + Q R+ FL+ NQ+F++ +P G ++L+ ++ ++ LP FL +
Sbjct: 65 FRVYVVPEASTLLQTGGAFFLDLQEKDV-LNFQWQILSLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEVLKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIEEARAADERTCRAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPSTVKASRKYLLAEPLV---EIPFHHEDFEVEKVYLK---------------PE----AAKTSKDYSFVRCRSQYGIPAYGMTTVRYLETGDVVHLKRVLSARDYSYAVRHRCDPTRHVIKQQRMCFLYENQSFQIHVYKEPGNLAGLAILHVQASCKNDQDILLPAFLNI 384
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Match: H3HDN6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDN6_PHYRM) HSP 1 Score: 240 bits (612), Expect = 1.590e-68 Identity = 144/345 (41.74%), Postives = 205/345 (59.42%), Query Frame = 3
Query: 3 FQVFTVPEAATSLFTNGISLDALQDTSPRFAFQWSILSLQIALEDGFERVARTSGKPSILFCDRGLMDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCDNNEARSENADLARDVDKKTGEVWLGHPRHFMFDNSTDFEGKLDRVTATVSRLVGLPCRPRKLGKFLLAQPPPSPEEFPERVEAFEVEKVYLQKKDCGERGGVAVEILPEIDVPASRISSE-SFLEKRGRQGLFVLEMTTITSYDDGTVVEVTRRLSAEEYATVELERGDHARQKVYQLRVSFLWANQAFELQTDVKPA--YGTSVLYRRSE---SGELSLPPFLAVDE 1019
F+V+ VPEA+T L T G L++ FQW IL+LQI+LED F +A+ SGKP ++ CDRG+MDGS YM PE+W L + LD + LRD RY AI HLVTAA GAE++YS +NN R E+ D AR +DK+T W+GHP+ ++FDNST FEGK+ R+ T + L G+P + K+LLA+ +P E P E FEVEKVYL+ PE A++ S + SF+ R + G+ MTT+ D G V + R LSA EY+ R D +R + Q R+ FL+ NQ+F++ +PA G +VL+ ++ ++ +P FL +++
Sbjct: 302 FRVYVVPEASTLLQTGGAFFLDLKEKDI-LNFQWQILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLEHDLDTVTLRDTRYIAIFHLVTAAHGAEKFYSLENNGIRIESIDQARAIDKRTCLAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVKASRKYLLAK---TPIEIPFHHEDFEVEKVYLK---------------PE----AAKTSKDYSFVRCRSQYGIPAYGMTTVRYLDTGDAVHLKRVLSAREYSYAVRHRSDPSRNVIKQQRMCFLYENQSFQIHVYKEPADVAGLAVLHVQASCENDQDIVMPAFLDIEK 623 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13404.2417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13404.2417.1 >prot_H-elongata_contig13404.2417.1 ID=prot_H-elongata_contig13404.2417.1|Name=mRNA_H-elongata_contig13404.2417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp MDGSVYMPPEEWTALVKANGLDELKLRDGRYDAILHLVTAACGAEEYYSCback to top mRNA from alignment at H-elongata_contig13404:4591..8071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13404.2417.1 ID=mRNA_H-elongata_contig13404.2417.1|Name=mRNA_H-elongata_contig13404.2417.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3481bp|location=Sequence derived from alignment at H-elongata_contig13404:4591..8071- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13404:4591..8071- >mRNA_H-elongata_contig13404.2417.1 ID=mRNA_H-elongata_contig13404.2417.1|Name=mRNA_H-elongata_contig13404.2417.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1644bp|location=Sequence derived from alignment at H-elongata_contig13404:4591..8071- (Himanthalia elongata Himel1 dioecious)back to top |