prot_H-elongata_contig13404.2416.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13404.2416.1
Unique Nameprot_H-elongata_contig13404.2416.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length273
Homology
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: D7G6Y7_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y7_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 7.530e-26
Identity = 65/81 (80.25%), Postives = 70/81 (86.42%), Query Frame = 0 
Query:    1 MGTAESKGERVSDDLLFEE-DEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MGT ESK   ++DDL+ EE D+DSL D LRSNLTRLIAYAKSADP LQRQVAEKLANEAVK SRQ QIV+LGGLKLLLPLT
Sbjct:    1 MGTGESK---MNDDLVLEEEDDDSLTDALRSNLTRLIAYAKSADPSLQRQVAEKLANEAVKPSRQAQIVQLGGLKLLLPLT 78
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A2D4C729_PYTIN (Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C729_PYTIN)

HSP 1 Score: 95.1 bits (235), Expect = 1.710e-19
Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 0 
Query:    1 MGTAESKGERVSDDLLFEE-DEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MGTA SKG +  D+  FE+ DED+  + LR NL RLI YAKSAD  LQR+VAEKLANEAVK  RQVQIVEL GLKLLLPLT
Sbjct:    1 MGTAGSKGSK--DEFTFEDADEDTFTEALRVNLQRLIVYAKSADSTLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A835YNM9_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.810e-19
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    1 MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MG+ ESK E   D+L FE+D++ L+  LR +L+RLIAYA+SAD  LQRQVAEKLANEAV+  RQVQI ELGGL+LLLPLT
Sbjct:    1 MGSGESKREE-KDELEFEDDDEGLSTALRIHLSRLIAYAESADVSLQRQVAEKLANEAVRPERQVQIAELGGLRLLLPLT 79
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.850e-18
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0 
Query:    1 MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MG + SKG    D+  +E+ ++   D L+ NL RLIAYAKSAD  LQR+VAEKLANEAVK  RQVQIVEL GLKLLLPLT
Sbjct:    1 MGQSGSKG-GSKDEFTYEDSDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.940e-18
Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = 0 
Query:    1 MGTAESKGERVSDDLLFEED--EDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MG A +KG +  D+  FEED  +D+  + LR NL RLI YAKSAD  LQR+VAEKLANEAVK  RQVQIVEL GLKLLLPLT
Sbjct:    1 MGNASAKGSK--DEFTFEEDTSDDAFTEALRVNLQRLIVYAKSADTSLQREVAEKLANEAVKPDRQVQIVELEGLKLLLPLT 80
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.200e-18
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 0 
Query:    1 MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MG + SKG    D+  +E+ ++   D L+ NL RLIAYAKSAD  LQR+VAEKLANEAVK  RQVQIVEL GLKLLLPLT
Sbjct:    1 MGQSGSKG-GSKDEFTYEDSDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A7S1TZQ4_9STRA (Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 5.680e-16
Identity = 48/80 (60.00%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    2 GTAESKGERVSDDL-LFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            G   +KG + +D+  + EEDE+ +++ +R+ L+RLI YA+S+D +LQR VAEKLANEAVK +RQVQIVELGGL+LLLPLT
Sbjct:   52 GDMGNKGAKQTDEWEIDEEDENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLT 131
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A7S1XQE0_9STRA (Vacuolar protein 8 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQE0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.530e-15
Identity = 48/80 (60.00%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    2 GTAESKGERVSDDL-LFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            G   +KG + +D+  + EEDE+ +++ +R+ L+RLI YA+S+D +LQR VAEKLANEAVK +RQVQIVELGGL+LLLPLT
Sbjct:   52 GDMGNKGAKQTDEWEIDEEDENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLT 131
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A6S9E232_HETAK (Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E232_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 2.170e-15
Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0 
Query:    1 MGTAESK-GERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 80
            MG  +SK  E+   +L   + E+ L   LR +L+RLI YA+SAD  LQRQVAEKLANEAVK  RQVQIVELGGLKLLLPLT
Sbjct:    1 MGQGDSKHSEKDEIELEDADTEEGLTKLLRVHLSRLIVYAESADCHLQRQVAEKLANEAVKPERQVQIVELGGLKLLLPLT 81
[Close]
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: H3HCQ8_PHYRM (Vacuolar protein 8 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ8_PHYRM)

HSP 1 Score: 85.5 bits (210), Expect = 2.900e-15
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:    1 MGTAESKGERVS-DDLLFEE-DEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPL 79
            MG A +KG + S D+  F+E D+++  + LR NL RLI YA+SAD  LQR+VAEKLANEAVK  RQVQIVEL GL+LLLPL
Sbjct:  176 MGNAGAKGTKGSKDEFTFDEADDEAFTEALRVNLQRLIVYARSADTALQREVAEKLANEAVKPDRQVQIVELDGLELLLPL 256
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y7_ECTSI7.530e-2680.25Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
A0A2D4C729_PYTIN1.710e-1970.37Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepI... [more]
A0A835YNM9_9STRA4.810e-1967.50Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=3... [more]
A0A397ACU4_9STRA1.850e-1865.00Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A5D6Y1Z7_9STRA1.940e-1867.07Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID... [more]
A0A418DV07_9STRA2.200e-1865.00Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A7S1TZQ4_9STRA5.680e-1660.00Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S1XQE0_9STRA1.530e-1560.00Vacuolar protein 8 n=4 Tax=Phaeomonas parva TaxID=... [more]
A0A6S9E232_HETAK2.170e-1564.20Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo Ta... [more]
H3HCQ8_PHYRM2.900e-1562.96Vacuolar protein 8 n=1 Tax=Phytophthora ramorum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 60..100
e-value: 0.0031
score: 26.8
coord: 183..223
e-value: 0.0079
score: 25.4
coord: 101..141
e-value: 0.0086
score: 25.3
coord: 224..264
e-value: 11.0
score: 12.9
coord: 142..182
e-value: 0.015
score: 24.4
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 112..154
score: 12.617
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 153..195
score: 13.702
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 71..113
score: 12.897
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 30..268
e-value: 4.3E-51
score: 175.3
IPR006911Armadillo repeat-containing domainPFAMPF04826Arm_2coord: 74..249
e-value: 1.2E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR47249FAMILY NOT NAMEDcoord: 31..118
coord: 157..262
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 31..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13404contigH-elongata_contig13404:687..3366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13404.2416.1mRNA_H-elongata_contig13404.2416.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13404 687..3366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13404.2416.1 ID=prot_H-elongata_contig13404.2416.1|Name=mRNA_H-elongata_contig13404.2416.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp
MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQV
AEKLANEAVKSSRQVQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSV
NSDNQELMAKEGGIDMLIIMLASPHENLQRQASKALANLGVNTSNKERIC
MAGGVPPLVRLAGSKASGVAVEAVAALANLAVNDETEIQIVREGGLIPIL
DGAGSRNPELQSQCARALRNLSVNPGNKTRIIAMGGREVLLALSKSKDAR
IQQQADKALGNIDTEVLSLSRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR006911ARM-rpt_dom
IPR016024ARM-type_fold