mRNA_H-elongata_contig13404.2416.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: D7G6Y7_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y7_ECTSI) HSP 1 Score: 112 bits (279), Expect = 7.530e-26 Identity = 65/81 (80.25%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 1 MGTAESKGERVSDDLLFEE-DEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MGT ESK ++DDL+ EE D+DSL D LRSNLTRLIAYAKSADP LQRQVAEKLANEAVK SRQ QIV+LGGLKLLLPLT
Sbjct: 1 MGTGESK---MNDDLVLEEEDDDSLTDALRSNLTRLIAYAKSADPSLQRQVAEKLANEAVKPSRQAQIVQLGGLKLLLPLT 78
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A2D4C729_PYTIN (Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C729_PYTIN) HSP 1 Score: 95.1 bits (235), Expect = 1.710e-19 Identity = 57/81 (70.37%), Postives = 63/81 (77.78%), Query Frame = 1
Query: 1 MGTAESKGERVSDDLLFEE-DEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MGTA SKG + D+ FE+ DED+ + LR NL RLI YAKSAD LQR+VAEKLANEAVK RQVQIVEL GLKLLLPLT
Sbjct: 1 MGTAGSKGSK--DEFTFEDADEDTFTEALRVNLQRLIVYAKSADSTLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A835YNM9_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM9_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.810e-19 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MG+ ESK E D+L FE+D++ L+ LR +L+RLIAYA+SAD LQRQVAEKLANEAV+ RQVQI ELGGL+LLLPLT
Sbjct: 1 MGSGESKREE-KDELEFEDDDEGLSTALRIHLSRLIAYAESADVSLQRQVAEKLANEAVRPERQVQIAELGGLRLLLPLT 79
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.850e-18 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MG + SKG D+ +E+ ++ D L+ NL RLIAYAKSAD LQR+VAEKLANEAVK RQVQIVEL GLKLLLPLT
Sbjct: 1 MGQSGSKG-GSKDEFTYEDSDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.940e-18 Identity = 55/82 (67.07%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 MGTAESKGERVSDDLLFEED--EDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MG A +KG + D+ FEED +D+ + LR NL RLI YAKSAD LQR+VAEKLANEAVK RQVQIVEL GLKLLLPLT
Sbjct: 1 MGNASAKGSK--DEFTFEEDTSDDAFTEALRVNLQRLIVYAKSADTSLQREVAEKLANEAVKPDRQVQIVELEGLKLLLPLT 80
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-18 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MG + SKG D+ +E+ ++ D L+ NL RLIAYAKSAD LQR+VAEKLANEAVK RQVQIVEL GLKLLLPLT
Sbjct: 1 MGQSGSKG-GSKDEFTYEDSDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLT 79
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A7S1TZQ4_9STRA (Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.680e-16 Identity = 48/80 (60.00%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 4 GTAESKGERVSDDL-LFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
G +KG + +D+ + EEDE+ +++ +R+ L+RLI YA+S+D +LQR VAEKLANEAVK +RQVQIVELGGL+LLLPLT
Sbjct: 52 GDMGNKGAKQTDEWEIDEEDENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLT 131
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A7S1XQE0_9STRA (Vacuolar protein 8 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQE0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.530e-15 Identity = 48/80 (60.00%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 4 GTAESKGERVSDDL-LFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
G +KG + +D+ + EEDE+ +++ +R+ L+RLI YA+S+D +LQR VAEKLANEAVK +RQVQIVELGGL+LLLPLT
Sbjct: 52 GDMGNKGAKQTDEWEIDEEDENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLT 131
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: A0A6S9E232_HETAK (Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E232_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 2.170e-15 Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 1 MGTAESK-GERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPLT 240
MG +SK E+ +L + E+ L LR +L+RLI YA+SAD LQRQVAEKLANEAVK RQVQIVELGGLKLLLPLT
Sbjct: 1 MGQGDSKHSEKDEIELEDADTEEGLTKLLRVHLSRLIVYAESADCHLQRQVAEKLANEAVKPERQVQIVELGGLKLLLPLT 81
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Match: H3HCQ8_PHYRM (Vacuolar protein 8 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ8_PHYRM) HSP 1 Score: 85.5 bits (210), Expect = 2.900e-15 Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 MGTAESKGERVS-DDLLFEE-DEDSLNDELRSNLTRLIAYAKSADPRLQRQVAEKLANEAVKSSRQVQIVELGGLKLLLPL 237
MG A +KG + S D+ F+E D+++ + LR NL RLI YA+SAD LQR+VAEKLANEAVK RQVQIVEL GL+LLLPL
Sbjct: 176 MGNAGAKGTKGSKDEFTFDEADDEAFTEALRVNLQRLIVYARSADTALQREVAEKLANEAVKPDRQVQIVELDGLELLLPL 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13404.2416.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13404.2416.1 >prot_H-elongata_contig13404.2416.1 ID=prot_H-elongata_contig13404.2416.1|Name=mRNA_H-elongata_contig13404.2416.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp MGTAESKGERVSDDLLFEEDEDSLNDELRSNLTRLIAYAKSADPRLQRQVback to top mRNA from alignment at H-elongata_contig13404:687..3366+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13404.2416.1 ID=mRNA_H-elongata_contig13404.2416.1|Name=mRNA_H-elongata_contig13404.2416.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2680bp|location=Sequence derived from alignment at H-elongata_contig13404:687..3366+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13404:687..3366+ >mRNA_H-elongata_contig13404.2416.1 ID=mRNA_H-elongata_contig13404.2416.1|Name=mRNA_H-elongata_contig13404.2416.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1638bp|location=Sequence derived from alignment at H-elongata_contig13404:687..3366+ (Himanthalia elongata Himel1 dioecious)back to top |