prot_H-elongata_contig133881.2405.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133881.2405.1
Unique Nameprot_H-elongata_contig133881.2405.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133881.2405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027443Isopenicillin N synthase-likeGENE3D2.60.120.330coord: 1..50
e-value: 2.5E-6
score: 29.3
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133881contigH-elongata_contig133881:1609..1764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133881.2405.1mRNA_H-elongata_contig133881.2405.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133881 1597..1764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133881.2405.1 ID=prot_H-elongata_contig133881.2405.1|Name=mRNA_H-elongata_contig133881.2405.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MSGYFKIMQSLAERVTDLLAVSFGVDPAIFQGCHGERLCALRLIHYSSQV
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027443IPNS-like