prot_H-elongata_contig13375.2395.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13375.2395.1
Unique Nameprot_H-elongata_contig13375.2395.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length334
Homology
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: D7G0I3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I3_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 5.970e-81
Identity = 126/168 (75.00%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNEINPNDFNYAREPHPNERNKFSENIYRVGDTQLVEAVDLLEKRCPEAIVRNNDDGYFVVKVDALPAPVFWEVELYLRRRLGSKPGLTKKRIPTTYRPAPDSLARLSGRKR 168
            MDLGTIQENI +  Y SLEACAKDVR VWTNA+LYNP +SVVAQ A  LSKVFEGMYN+INP DFNYAREP+ +ERNK S +IYRV D+QL EAV LLE+RCPEA+VR++++GYFVVKV+ALP+PVFWEVELYLR+RL ++P  TKK+IPTT+RP PDS+ARLSGRKR
Sbjct:   16 MDLGTIQENIRQNVYPSLEACAKDVRTVWTNAYLYNPAKSVVAQGARALSKVFEGMYNKINPADFNYAREPNVDERNKLSRDIYRVEDSQLEEAVQLLEQRCPEAVVRDDEEGYFVVKVEALPSPVFWEVELYLRKRLCNQPDRTKKKIPTTFRPPPDSMARLSGRKR 183          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.430e-19
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNEINPND----FNYAREPHPNERNKFSENIYRVGDTQLVEAVDLLEKRCPEAIVRNNDDGYFVVKVDALPAPVFWEVELYLRRRLGSKPGLTKKR 148
            MDLGT+++ I    YAS+ ACA+D+R+VW+N   YN   S     A +LSK FE  + ++   D     +    P   E+ KFS  IY++   +L + V+ LE RCPEAI +  +D    + +DA+    F E++ +++  + +     KKR
Sbjct:   42 MDLGTVKKKIEENEYASVHACAEDIRLVWSNCKKYNQDGSDFFNLAESLSKRFEDQFAKVKAEDPMIEDDTEHAPSLEEKTKFSHMIYKIKQEELGQLVEKLEDRCPEAIDKTPNDDELEINIDAIDPKTFRELDKFVKACIVNNQPKKKKR 193          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A3L6RGR8_PANMI (Transcription factor GTE7-like n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RGR8_PANMI)

HSP 1 Score: 62.4 bits (150), Expect = 4.150e-7
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNE 59
            MDLGT++ N+  GRY S EA A DVR+ ++NA  YNPP+  V + A +L   FEG+Y E
Sbjct:  231 MDLGTVKRNLAAGRYPSHEAFASDVRLTFSNAARYNPPDHHVHRYAGSLLATFEGLYRE 289          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A0D9X579_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9X579_9ORYZ)

HSP 1 Score: 61.6 bits (148), Expect = 7.040e-7
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNE 59
            MDLGT++EN+  GRY S E  A DVR+ ++NA  YNPP+  V + A  L   FEG+Y E
Sbjct:  164 MDLGTVKENLAFGRYPSHEPFAADVRLTFSNALRYNPPDHHVHRYAGNLLATFEGLYKE 222          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A7S4F2T3_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2T3_CHRCT)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-6
Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFE 54
            MDLGTI+  + R  Y S+E+   DVR+V++NA LYNPP S VA SA  L K FE
Sbjct:   59 MDLGTIEAKLERSEYRSVESFIDDVRLVFSNACLYNPPASHVALSARALEKEFE 112          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A7S1V4M0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V4M0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.000e-6
Identity = 41/167 (24.55%), Postives = 78/167 (46.71%), Query Frame = 0
Query:    1 MDLGTIQENI---HRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNEINPNDFNYAREPHPN-------------------------------ERNKFSENIYRVGDTQLVEAVDLLEKRCPEAIVRNNDDGYFVVKVDALPAPVFWEVELY 133
            MDLGTI++ +   + G Y +L+ CA+DVR+VW+N   YN   S     A  LSK +E  Y ++   D+    +                                   E+  F++++Y++   +L   +  L+++CP+A+++++ +    + VD +   VF E++ Y
Sbjct:   50 MDLGTIKKKLKSRNNGDYKTLQQCAEDVRLVWSNCMTYNADGSDFFVLAQGLSKKWEDKYAKL-LQDYGIQADASGGSXXXXXXXXXXXXXXXXXXXXTTNEAIVSLEEKRAFAKSLYKLTKEELGRILIELDQKCPQALLKSSSEDEMEMNVDKITRLVFDELKKY 215          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A2C9UFA8_MANES (Bromo domain-containing protein n=3 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UFA8_MANES)

HSP 1 Score: 58.9 bits (141), Expect = 5.810e-6
Identity = 31/104 (29.81%), Postives = 52/104 (50.00%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNEINPNDFNYAREPHPNERNKFSENIYRVGDTQLVEAVDLLEKRCPE 104
            MDLGTI+  + + +Y+  E    DVR++++NA LYNPP + V Q A +++K FE  +  +                 K++  + + GD  ++    L    CPE
Sbjct:  115 MDLGTIKSKLEKNQYSGAEEFVADVRLIFSNAMLYNPPTNYVHQMAESMNKFFESRWKSLEA---------------KWNRELSKSGDENILSGKSL-RLNCPE 202          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A444WWU0_ARAHY (Bromo domain-containing protein n=2 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444WWU0_ARAHY)

HSP 1 Score: 57.4 bits (137), Expect = 1.130e-5
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNEI 60
            MDLGTI+  + +  Y+S+E  A DVR+ ++NA  YNPP + V   A  LSKVFE  + ++
Sbjct:  122 MDLGTIKSKLEKNIYSSIEEFATDVRLTFSNAMTYNPPNNDVHLMAKELSKVFEKKWKDL 181          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: UPI0010FC6199 (transcription factor GTE12 isoform X2 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI0010FC6199)

HSP 1 Score: 57.4 bits (137), Expect = 1.600e-5
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFEGMYNEI 60
            MDLGTI+  + +  Y+S+E  A DVR+ ++NA  YNPP + V   A  LSKVFE  + ++
Sbjct:  122 MDLGTIKSKLEKNIYSSIEEFATDVRLTFSNAMTYNPPNNDVHLMAKELSKVFEKKWKDL 181          
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Match: A0A7J7II75_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II75_9RHOD)

HSP 1 Score: 57.8 bits (138), Expect = 1.620e-5
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 MDLGTIQENIHRGRYAS-LEACAKDVRIVWTNAFLYNPPESVVAQSAHTLSKVFE 54
            MDLGTI++ +  G Y +  EA  +DVR+VW+NA  YNPPE+     A TL++VFE
Sbjct:  373 MDLGTIRQRLETGEYGTDPEAFRRDVRLVWSNAMTYNPPETEYYVMAKTLNEVFE 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13375.2395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G0I3_ECTSI5.970e-8175.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3JU45_9STRA2.430e-1934.21Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A3L6RGR8_PANMI4.150e-750.85Transcription factor GTE7-like n=1 Tax=Panicum mil... [more]
A0A0D9X579_9ORYZ7.040e-750.85Uncharacterized protein n=1 Tax=Leersia perrieri T... [more]
A0A7S4F2T3_CHRCT1.400e-655.56Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S1V4M0_9STRA2.000e-624.55Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A2C9UFA8_MANES5.810e-629.81Bromo domain-containing protein n=3 Tax=Manihot es... [more]
A0A444WWU0_ARAHY1.130e-545.00Bromo domain-containing protein n=2 Tax=Arachis hy... [more]
UPI0010FC61991.600e-545.00transcription factor GTE12 isoform X2 n=1 Tax=Arac... [more]
A0A7J7II75_9RHOD1.620e-550.91Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..47
e-value: 4.0E-10
score: 39.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..43
score: 11.188
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..78
e-value: 2.8E-18
score: 67.9
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..64
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 1..67
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 1..67
IPR027353NET domainPROSITEPS51525NETcoord: 61..145
score: 11.883

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13375contigH-elongata_contig13375:748..3418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13375.2395.1mRNA_H-elongata_contig13375.2395.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13375 682..5127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13375.2395.1 ID=prot_H-elongata_contig13375.2395.1|Name=mRNA_H-elongata_contig13375.2395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp
MDLGTIQENIHRGRYASLEACAKDVRIVWTNAFLYNPPESVVAQSAHTLS
KVFEGMYNEINPNDFNYAREPHPNERNKFSENIYRVGDTQLVEAVDLLEK
RCPEAIVRNNDDGYFVVKVDALPAPVFWEVELYLRRRLGSKPGLTKKRIP
TTYRPAPDSLARLSGRKRRSSSGSSGSASGGDNGESDVIGSNQRSFNETR
AFAQTIANGNKSGHQVDATSSTKGVFDFGTVEKRTNRTGAASGNHRPKAD
TGDNLRRARARDGEPMSPSRTRQATDGQEEGGMVDDVGGGVESVYGAAIP
DTSPEVDFMGWLEDPIDTSFREGGAGFGIGAAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf
IPR027353NET_dom