prot_H-elongata_contig133694.2392.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133694.2392.1
Unique Nameprot_H-elongata_contig133694.2392.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
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BLAST of mRNA_H-elongata_contig133694.2392.1 vs. uniprot
Match: D8LI69_ECTSI (U-box domain containing protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI69_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.870e-30
Identity = 167/209 (79.90%), Postives = 176/209 (84.21%), Query Frame = 0 
Query:    1 KANLRDPQFDATLLHWAVNEGHVPTVEHLLTCGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGSPTDKRDDDGYVPGDSFHQSVPEATKNAILEAVKRGPASGDSVVRAATDSSELLLETLHGCRSWGELFEVRFTNTM 209
            KAN RD Q+DATLLHWAVNEGH+PTVEHLL CGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS+RTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           DG +PG +FH SVPE     I  A++RGPASGD VVRAAT SSELLLETL  CRSWGELFE R  + +
Sbjct:   30 KANARDSQYDATLLHWAVNEGHMPTVEHLLACGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASNRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGNIPGSTFHHSVPEEAIRDIRSAMQRGPASGDGVVRAATVSSELLLETLRACRSWGELFENRHFDVL 238
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BLAST of mRNA_H-elongata_contig133694.2392.1 vs. uniprot
Match: A0A6H5KWH5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH5_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 3.410e-30
Identity = 167/209 (79.90%), Postives = 176/209 (84.21%), Query Frame = 0 
Query:    1 KANLRDPQFDATLLHWAVNEGHVPTVEHLLTCGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGSPTDKRDDDGYVPGDSFHQSVPEATKNAILEAVKRGPASGDSVVRAATDSSELLLETLHGCRSWGELFEVRFTNTM 209
            KAN RD Q+DATLLHWAVNEGH+PTVEHLL CGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS+RTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           DG +PG +FH SVPE     I  A++RGPASGD VVRAAT SSELLLETL  CRSWGELFE R  + +
Sbjct:   30 KANARDSQYDATLLHWAVNEGHMPTVEHLLACGADVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASNRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGNIPGSTFHHSVPEEAIRDIRSALQRGPASGDGVVRAATVSSELLLETLRACRSWGELFENRHFDVL 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133694.2392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI69_ECTSI1.870e-3079.90U-box domain containing protein, expressed n=1 Tax... [more]
A0A6H5KWH5_9PHAE3.410e-3079.90Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 76..105
e-value: 0.4
score: 19.7
coord: 109..138
e-value: 10.0
score: 15.0
coord: 43..72
e-value: 0.0025
score: 27.1
coord: 9..38
e-value: 0.012
score: 24.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 9..41
score: 10.953
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 43..75
score: 12.369
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 109..141
score: 9.324
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 76..108
score: 11.087
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..183
e-value: 3.3E-41
score: 142.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 9..146
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 14..107
e-value: 2.5E-16
score: 60.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..146
score: 39.629
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 69..141
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 3..110
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 69..141
coord: 3..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133694contigH-elongata_contig133694:173..1664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133694.2392.1mRNA_H-elongata_contig133694.2392.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133694 173..1664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133694.2392.1 ID=prot_H-elongata_contig133694.2392.1|Name=mRNA_H-elongata_contig133694.2392.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
KANLRDPQFDATLLHWAVNEGHVPTVEHLLTCGADVRLRDGKHSATPLHW
AAAKGHAFVVRLLMMKESDVNSRDASHRTPLHWAAGNGQLGVIRELLFWG
ARVECTDSWRKVPLHWAAFRGHVASVEELVGKGSPTDKRDDDGYVPGDSF
HQSVPEATKNAILEAVKRGPASGDSVVRAATDSSELLLETLHGCRSWGEL
FEVRFTNTMPCFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom