mRNA_H-elongata_contig1336.2386.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 532 bits (1371), Expect = 7.950e-172 Identity = 310/644 (48.14%), Postives = 410/644 (63.66%), Query Frame = 1
Query: 7 TVVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVAL-GVTGDSIELRGVLEDSEWLSIMEVEIMVVPGGSSPTPAPTS---------------SPTGILQPVGLIPLSSSSSSAGARQRYYAKDNDFSTSWTCD----DSTSWNGDCKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGTAWYSDDPYEMFVESSGTTTDFETYDFDVFTNRIVVAG-YVTGDESISIAEAKLIFKL----------------------------ITWSS-------------------LTRVDLQFPTGDTYLFEMHLYTEEDGADDPFTILTGLESEDSSEWQSFVVELDA-DQTVTEVRLVMKGTSSGTSGFYLLDARFIATTADNPTDTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGKTDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNIVYSYAWIGNMDGDCVVIRNSQMISIDARSYDE 1731
+V V A LYD L+ DGGCDP+GC D TRDG+++ A SRWSCAP+LG + CSI+Y L ++ ++ + +AM+KG ER T+++ VD +V +WTSSG T FEA+ + G +G +E+ GVL+DSEWLSI+E EIM++ G+SPTP S TG LQPVGLIPL+S+ ++ ++Y+ KD D STSWTC ++ DC L FN+F +RHIKQVKIAL +GA+ VDM+I A Y E+FV SSGTT FET++FD FT+ + +AG + +G +SISI+E + + ++ WSS + V+LQFP G+TY FE+ LY D D+ + TGLES DS WQ F EL D VTEV ++MKGT SG GF L +ARF+ T DNP++T+ + S + W YPDFV EG DQ+AIMGAICAVKKASFDGVDCVG D +A G VS+ MGE++V+GNIFMKSGV+L ++SIDDSP +T+I LEDGAAGKTD AIIV+DG+ DA + E+WI G YD +TS+ T AV GLGS +SIT S NI YA + + DGD +V+R+S+M++IDA YDE
Sbjct: 364 SVTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAA-SRWSCAPKLGGE---CSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAIDMSGTSGQVLEITGVLDDSEWLSIIEAEIMLLEDGASPTPTTXXXXXXXXXXXXXXXXXSTTGTLQPVGLIPLASTGGTS--LEKYHIKDGDMSTSWTCSGDPQEADDPYYDCILQFNMFSHRHIKQVKIALPDGAERAVDMRIA-APYDASFGEVFVTSSGTTDGFETFEFDYFTDVVSIAGVFTSGGQSISISEVEFVEEIQDGEVSVVDFDAPYDNGDGLWTGATTDAFEWSSESDEAMDRTLSFVLNSYALMEAVELQFPVGETYKFELTLY---DDGDEIVSTFTGLESVDSEGWQRF--ELGTIDDPVTEVTIIMKGTGSGAPGFKLANARFLGTAIDNPSNTFYVGSTYVESWRSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVYLDASFSIDDSPYTTDIILEDGAAGKTDTAAIIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDE 995
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 516 bits (1328), Expect = 1.400e-167 Identity = 305/627 (48.64%), Postives = 399/627 (63.64%), Query Frame = 1
Query: 1 EATVVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVAL--GVTGDSIELRGVLEDSEWLSIMEVEIMVVPGG---SSPTPAPTS--------------SPTGILQPVGLIPLSSSSSSAGARQRYYAKDNDFSTSWTCDDS---TSWNG----DCKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGTAWYSDDPYEMFVESSGTTTDFETYDFDVFTNRIVVAG-YVTGDESISIAEAKLIFKLITWSSLTRVDLQFPTGDTYLFEMHLYTEEDGADDPFTILTGLESEDSSEWQSFVVELDADQTVTEVRLVMKGTSSGTSGFYLLDARFIATTADNPTDTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGKTDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNIVYSYAWIGNMDGDCVVIRNSQMISIDARSYDEFTTTARLAYTSLDPRTSLSTPPL 1800
+ TV A L+D L+ D GCDPAGC+ LTRDG+ A SRWSCA LG +G+ CSI+Y L ++ L +A+Y GD R RTID+ VDGV+V +WTSSG T FE++A GV+G I L+GVL+DSEWLSI+E EIMV P PTPA T+ +P G LQPVGLIPL++ S R AKD D STSWTC S G +C L+F+L + RHIKQVKIAL++GA+ VDM I Y P E+ V SSGTT ETYD D T+ + ++G + + +SISI+E + + +++ L ++ + + FE+ L+ G D+P+ LTGLE ++E+QS + A Q VT + + ++G SG S F L+DAR + T DNPTDT+ + S I EW G PDFVG+G DQ AI AICAVKK ++DGVDCVG D SA GTV L+ GEY+V+GNIFMKSGVFL G Y DDSP + +IFLE+GA G TDVDA+IV+DG+ DA I ++WI GLYDPDTS+ + AV GLGST +SI +SQNI + W+ DGD +V+R+S +++IDA YDE+ T TS P T S PP+
Sbjct: 248 DTTVTTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDA-SRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSPIPTPVGDLQPVGLIPLATGDGSL--LDRCAAKDGDLSTSWTCTGDPREVSPQGILYYECSLLFDLVYTRHIKQVKIALADGAERAVDMSISRG-YGTTPEEL-VTSSGTTDGLETYDVDYRTSSVRISGDFSSPGQSISISEVEFVEEVVDGEVL--LETSYFDDYDWNFELSLFNRIGGTDEPYATLTGLEITGTAEYQSIDLTGFAGQYVTSIAVHVEG--SGGSEFPLIDARILGTKIDNPTDTFYVGSTFIPEWYGHGDPDFVGQGTGDQNAINAAICAVKKGTYDGVDCVGMDDSATGTVVLAFGEYHVDGNIFMKSGVFLKGRYRFDDSPYNIDIFLEEGAPGNTDVDAMIVMDGISDARIGDLWIHGLYDPDTSNDSPAVPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYYDEYKATGWRVCTSWTPTTLPSKPPI 865
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 516 bits (1328), Expect = 1.610e-167 Identity = 308/645 (47.75%), Postives = 400/645 (62.02%), Query Frame = 1
Query: 7 TVVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVAL-GVTGDSIELRGVLEDSEWLSIMEVEIMVVPGGSSPTPAPT---------------SSPTGILQPVGLIPLSSSSSSAGARQRYYAKDNDFSTSWTCD----DSTSWNGDCKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGTAWYSDDPY--EMFVESSGTTTDFETYDFDVFTNRIVVAGYVTGD-ESISIAEA----------------------------------------------KLIFKLITWSSLTRVDLQFPTGDTYLFEMHLYTEEDGADDPFTILTGLESEDSSEWQSFVVELDA-DQTVTEVRLVMKGTSSGTSGFYLLDARFIATTADNPTDTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGKTDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNIVYSYAWIGNMDGDCVVIRNSQMISIDARSYDE 1731
+V A YD RL+ DGGCDP+GC D TRDG+++TA SRWSCAP LG + C+I+Y L ++ ++ L +AM+KG ER ++ + VD +VT+WTSSG T FEA+ L G G +E+ GVL+DSEWLSI+E EIMV+ G+SP P +S TG LQPVGLIPL+S+ ++ +RY+ KD D STSWTC ++ + DC L F++F +R+IKQVKIAL +GA+ VDM+I + S+ E+FV SSGTT FETYDFD FTN + +AG T +SISI+E KL F L +++ + V+LQFP G+TY FE+ LY +ED FT G ES DS WQ F EL D VTE+ +VMKGT S GF L +ARF T DNP+DT+ + S + EW+ YPDFV EG DQ+AIMGAICAVKKASFDGVDCVG D +A G VS+ MGE++V+GNIFMKSGV L +SIDDSP +T+I LEDGAAGKTD A+IV+D + +A + WI G YD +TS+ T V GLGS +SIT S NI A + + DGD +V+R+SQMI+ID+ YD+
Sbjct: 177 SVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTA-SRWSCAPTLGGE---CTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIEAEIMVLEDGASPMPTTPXXXXXXXXXXXXXXXTSTTGTLQPVGLIPLASTGGTS--LERYHVKDGDMSTSWTCSGNPQETADTSYDCILQFSMFCHRNIKQVKIALPDGAERAVDMRIAAPYSSNSASFEEIFVTSSGTTDGFETYDFDHFTNYVSIAGVFTSSGQSISISEVEFVEEIQDGEVSVVDFETPYYGDALWPGATTDAFVWASESDAAIDEKLSFVLKSYAVMEAVELQFPIGETYKFELTLYDDEDEIVSTFT---GFESVDSEGWQRF--ELGTIDDPVTEIAIVMKGTGSEAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEWNSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVHLHAWFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIGNYDSETSNDTPTVHGLGSVGLSITGSTNITCIDASVYSSDGDALVVRDSQMINIDSGPYDD 810
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 515 bits (1326), Expect = 4.070e-165 Identity = 304/639 (47.57%), Postives = 402/639 (62.91%), Query Frame = 1
Query: 10 VVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVALGVT--GDSIELRGVLEDSEWLSIMEVEIMVVPG--------GSSPTPAPTSSPTGILQPVGLIPLSSSSSSAGAR-QRYYAKDNDFSTSWTCDDSTSWNGDCKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGTAWYSDDPY----EMFVESSGTTTDFETYDFDVFTNRIVVAG-YVTGDESISIAEAKLI---------------------------------------------FKLITWSSLTRVDLQFPTGDTYLFEMHLYTEEDGADDPFTILTGLESEDSSEWQSFVVE--LDADQTVTEVRLVMKGTSSGTSGFYLLDARFIATTADNPTDTYRIASARIVEWSG--SLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGKTDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNIVYSYAWIGNMDGDCVVIRNSQMISIDARSYDE 1731
V A L+D L D GCDP+GC+ LTRDG+ AT+ SRWSCAP+LG DG +C+I+Y L + ++ +AMYKGDER T ++ VDGV+VT+WTSSG T+ E++ T G +E+ GVL DSEWLSI+E I V P GS+P PAP + P G L VGL+PL+ + G +++KD DFSTSWTC T +C L F+LF +RHIKQVKIAL +GA+ VDM+I Y D+ E +V SSGTT +FETYDFDVFTN I+++G + + ++ISI+E + + F+L ++ + V+++FP GDTY F++ L ++ + TI TG ES D+++WQSF + LDADQ +TE+ +V++GT SG GF +LD R + T DNPTDT + S I W+G YPDFV EG DQ+ IM AIC VKKASFDGVDCVG D +A GTV L G +YV+GNIFMKSGVFL G++S +DSP T I LE+GAAGKTD+DA++V+DG+ +A+ D IWI G YDPDTS+ T AV GLGST +S+ S NI A I +DGD +V+R+S MISIDA Y+E
Sbjct: 376 VTTTATLFDPSLLADNGCDPSGCTAGLTRDGDYATS-SRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYKGDERQVTAEVRVDGVLVTTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIETLIYVWPDTAPTPSTTGSTPAPAPIT-PVGELTAVGLLPLADCTGCFGEDLPPFHSKDGDFSTSWTCVGGT----ECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAGR-YDDELAAAFAEAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEVEFMEELQAGEIQISEWNTPLADARVDGPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLELNDDQIRGEILKTI-TGFESADTADWQSFDLSQHLDADQFLTEINIVVQGTGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQGSWYVDGNIFMKSGVFLDGSFS-EDSPYFTGIILEEGAAGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEE 1005
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 487 bits (1254), Expect = 2.020e-154 Identity = 291/652 (44.63%), Postives = 387/652 (59.36%), Query Frame = 1
Query: 1 EATVVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVALGVT--GDSIELRGVLEDSEWLSIMEVEIMVVPGGS-SPTPAPTSS-----------------PTGILQPVGLIPLSSSSSSAGARQRYYAKDNDFSTSWTCD-DSTSWNGD------CKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGTAWYSDDPYEMFVESSGTTTDFETYDFDVFTNRIVVAG-YVTGDESISIAEAKLIFKLIT----------------------------WSS-------------------LTRVDLQFPTGDTYLFEMHLYTEEDGADDPFTILTGLESEDSSEWQSFVVELDADQTVTEVRLVMKGTSSGTSGFYLLDARFIATTADNPTDTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGKTDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNIVYSYAWIGNMDGDCVVIRNSQMISIDARSYDE 1731
+ TV A L+D L+ D GCDPAGC+G LTRDG++ T SRW+CAP LG C I+Y L ++ + +A+Y GD R RTI+++VDG +VT+WTSSG T FE++AL T G +EL+GVL+DSEWLSI+E EIMV P +P PAP ++ P LQPVGL PL+ + S RY KD DF+TSWTC D T N + C+L F L +YRH+KQVK+AL++GA+ VDM++ +S E FV SSGTT FETYDFD + I +A + + ESISI+E +++ +++ WSS +T + L FP GDTY F++ L+ DG + +T +TGLES A+Q VT + + MKGT SG GF +LDA + T DNP+DT+ + S I W G YPDFVG G DQ AI GAIC VKK ++DGV+CV D +A GTV LS G YYVNGNIFM+SGV LLG++ DD P++T+I LE+GA G TD+DAI+V+DG+ DA I+++WI+G YDP+T SAV GLGS +S+ NSQNI I GD +V+R+S +++IDA YDE
Sbjct: 370 DTTVTTTADLFDPDLAVDNGCDPAGCTGALTRDGDM-TDTSRWACAPSLGG---VCFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDTASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPLPAADLQPVGLTPLAIGNESP--LDRYATKDGDFTTSWTCTGDPTEPNDEGITYYQCELFFGLVYYRHVKQVKVALADGAERSVDMRLAGR-FSSSIAEEFVTSSGTTNGFETYDFDYKASYIRIAAVFSSPGESISISEVEIMEEVVEGEAPIDIFSTPYDNGDGLWNEPTTDGFEWSSNSNEAIDQSLTLSLAGYHTVTELQLMFPEGDTYKFDVTLFNNLDGTGEAYTTITGLESXXXXXXXXXXXXXXANQYVTSIGIEMKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVGSTFIEYWGGDGYPDFVGSGSGDQNAINGAICGVKKGTYDGVNCVDVDDTATGTVDLSWGAYYVNGNIFMQSGVLLLGSFG-DDDPHTTDIVLEEGAEGNTDIDAIVVMDGIRDAWIEKVWIQGNYDPETDG-ISAVSGLGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVNIDAGRYDE 1012
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI) HSP 1 Score: 157 bits (396), Expect = 4.950e-37 Identity = 115/300 (38.33%), Postives = 157/300 (52.33%), Query Frame = 1
Query: 10 VVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVALGVTGDSIELRGVLEDSEWLSIMEVEIMVVPGGS-SPTPAPTSSPTGILQPVGLIPLSSSSSSAGARQR----YYAKDNDFS--TSWTCDDSTSWNGDCKLIFNLFWYRHIKQVKIALSNGADAV------VDMKIGTAWYSDDPYEMFVESSGTTTDFETYDFDVFTNRIV-VAGYVTGD-ESISIAEAKLI 864
V EAP++D R + GC PAGC G TRDG I + +SRWSCAP L S S C+ITY+L +E L IA+Y+GD RTRTIDI VDG SWTSSG T DFE++ LGV G +EL G L+D EWLSI+EVEI+V G S + G + + + G +D D S + W+C + G C + ++L I ++++A+ G V VD + T W SSGTT+ FE+ D T ++V + G D E +SI E +++
Sbjct: 34 VTTEAPVFDDRATLPYGCPPAGCVGANTRDG-ITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGVDGKVVELVGDLQDWEWLSILEVEILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSEDSRWSC--APELGGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTW----------TSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIM 320
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 150 bits (380), Expect = 6.620e-35 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 7 TVVVEAPLYDTRLSDDGGCDPAGCSGDLTRDGNIATADSRWSCAPELGSDGSTCSITYSLLSSMFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVAL-GVTGDSIELRGVLE-DSEWLSIMEVEIMVVPGGSSPTPAPTSSPTGILQPVGLIPLS 501
TV A LYDTRL D GCDP GC+ LTRDG+++ SRWSCAP+LG CSI+Y L + +E+L + MY+GD RTRT+D+ VDG +VT+WTSSG T +FE+V L G G + + G + DS+WLSI+E EIMV G +P P+PT+ P ++ P+ P+S
Sbjct: 190 TVTATADLYDTRLGDTVGCDPEGCTAALTRDGDMSEG-SRWSCAPKLGGP---CSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMVYEG-DAPAPSPTTPPP-VVMPMTPSPVS 350
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.990e-28 Identity = 93/226 (41.15%), Postives = 119/226 (52.65%), Query Frame = 1
Query: 691 MKIG---TAWYSDDPYEMFVESSGTTTDFETYDFDVFTNRIVVAG-YVTGDESISIAEAKLIFKLITWSSLTRVDLQFPTGDTYLFEMHLY--TEEDGADDPFTILTGLESEDSSEWQSFVVELDADQTVTEVRLVMKGTSSGTSGFYLLDARFIATTADNPTDTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLS 1350
M++G T+W + E FV SSGTT FETYDFD + + +A + + E ISI+E WSS D T + Y E G G+ + +QSF + ADQ VT + + MKGT SG GF +LD + DNP+DT+ + S I WSG+ PDFVG G DQ AI GAICAVKK +FDGVDC+ D +A GTV LS
Sbjct: 1 MRLGGRFTSWIA----EEFVMSSGTTDGFETYDFDYKASSVRIAAVFSSPGEFISISEEPTTDGF-EWSS----DSNEAISRTLFLSLAGYFMAERHGR--------GVHDHHAG-FQSFDLTGFADQYVTSIGIEMKGTGSGAPGFAVLDPMVLGAKIDNPSDTFYVGSTFIEFWSGNGLPDFVGTGSGDQNAINGAICAVKKGTFDGVDCIDMDETATGTVDLS 208
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 122 bits (306), Expect = 6.000e-25 Identity = 125/439 (28.47%), Postives = 193/439 (43.96%), Query Frame = 1
Query: 535 YYAKDNDFS--TSWTCD-----DSTSWNGDCKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGTAWYSDDPYEMFVESSGTTTDFETYDFDVFTNRI-VVAGYVTGDESISIAEAKL--------------IFKLITWSSLTRVDLQFPTGD--------------TYLFEMHLYTEEDGADD--PFTILTGLESEDSSEWQSFVVELDADQTVTEVRLVMKGTSSG---TSGFYLLDA-----RFIATTA----------DNPT----------------DTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGKTDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNI 1635
YY KD D S + WTC + S N DC L+ +L ++R+++Q++ A G + + I T S SSG +TD++T+D +V TN I +V + D+ I I E + +F W FP GD FE H+ ED P + +T ++ S+ Q FV + D+ T+ +V + TS+G T + L A RF+ TA D PT + + + + W + PD +G+G SDQE IM IC K +FDG DCVGE + +S+ G Y+++G +F+KSGV L G + P+ T + L + + DA+IV+DGV +D ++IE P T T G LG+ + + SQ++
Sbjct: 387 YYIKDGDMSDDSRWTCGPLAAGNLVSNNEDCHLMLSLNYFRYVRQIQFAFHMGDEQYNEFSIETVVSS-------AISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYW---------FPRGDGGDDDSSGDSDEDVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQ-FVFRVSYDEIETDEEIVEEFTSAGGPDTMETFTLSAPADVERFVYITAVSGPTFESQPDYPTLRVIDFQIVGEIKKDPGHFEVVTTTMTVWR--VVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISMKNGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLHNHTRLE---DAVIVIDGVTGGEVDSVYIEH-QTPMTGDITP--GTLGNLCLEVRGSQDL 800
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.130e-22 Identity = 116/438 (26.48%), Postives = 192/438 (43.84%), Query Frame = 1
Query: 535 YYAKDNDFSTSWTC------DDSTSWNGDCKLIFNLFWYRHIKQVKIALSNGADAVVDMKIGT-----AWYSDDPYEMFVESSGTTTDFETYDFDVFTNRIVVA---GYVTG-----------------------------------DESISIA--------------EAKLIFKLITWSSLTRVDLQFPTGDTYLFEMHLYTEEDGADDPFTILTGLESEDSSEWQSFVVELDADQTVTEVRLVMKGTSSGTSGFY----LLDARFIATTADNPTDTYRIASARIVEWSGSLYPDFVGEGRSDQEAIMGAICAVKKASFDGVDCVGEDSSAIGTVSLSMGEYYVNGNIFMKSGVFLLGAYSIDDSPNSTNIFLEDGAAGK-TDVDAIIVVDGVIDAVIDEIWIEGLYDPDTSSSTSAVGGLGSTAISITNSQNIVYS 1644
+Y KD + + WTC D SW DC L F+L ++R+I+Q++IA G + I W + P + SS +D++T+D V TN I + G +T DE A E I + S++T + ++FP +++F + E DG + FT G ++ W++F + A+ + + G + Y ++D + + P + + I W + PD +GEG S+Q+ +M AIC K ++FDG+DCVGE + T+ L G+YY++G IF+KSGVF+ G + D+ P + L DG + T DA++VVDG A + + DP + G +G+T +++ NSQ+I +S
Sbjct: 392 FYIKDENMDSRWTCGPLVAGSDRNSW--DCDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAI---SSEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTSNDDEEEDGADVDIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMV----EYDGIVEEFTSAGGPKT-----WETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRKEP-GYIDVVTTTIETWG--VVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKLQFGDYYIDGPIFLKSGVFIDGDWK-DEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDP---TGDIVPGTVGNTNLAVRNSQDIRFS 808 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1336.2386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1336.2386.1 >prot_H-elongata_contig1336.2386.1 ID=prot_H-elongata_contig1336.2386.1|Name=mRNA_H-elongata_contig1336.2386.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=568bp MFIERLNIAMYKGDERTRTIDIYVDGVIVTSWTSSGATLDFEAVALGVTGback to top mRNA from alignment at H-elongata_contig1336:610..7070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1336.2386.1 ID=mRNA_H-elongata_contig1336.2386.1|Name=mRNA_H-elongata_contig1336.2386.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6461bp|location=Sequence derived from alignment at H-elongata_contig1336:610..7070+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1336:610..7070+ >mRNA_H-elongata_contig1336.2386.1 ID=mRNA_H-elongata_contig1336.2386.1|Name=mRNA_H-elongata_contig1336.2386.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3408bp|location=Sequence derived from alignment at H-elongata_contig1336:610..7070+ (Himanthalia elongata Himel1 dioecious)back to top |