mRNA_H-elongata_contig133415.2374.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: D7G8A6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A6_ECTSI) HSP 1 Score: 213 bits (542), Expect = 5.100e-62 Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGC------SGAGAGFSGIGDPSGFANAAPP--SVPGESSRGGGVGGKHFPIIIYTTFESGALGKVESKIRDLGAGVPDNQKV 462
+VMGASE G VDGE++DRVYPIE+EGVGGAVRKLQIGYNNG NPFVAAQ FID+NELPQSYL EIAD+LTKR+G++ PT+G + A AGFSG+GDP+GFANAAPP + G + GVGG HFP+ Y TFE+G L KVE KIR+L AG+P+ K+
Sbjct: 399 EVMGASEAGQVDGETFDRVYPIEVEGVGGAVRKLQIGYNNGQNPFVAAQNFIDKNELPQSYLNEIADHLTKRAGESAPTIGMDAGAAGAAAAAGFSGVGDPTGFANAAPPPPGLRGGAGAASGVGGGHFPVTTYATFETGVLSKVEGKIRELNAGLPEGVKM 560
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A836CND0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND0_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.680e-40 Identity = 82/153 (53.59%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGA------GFSGIGDPSGFANAA-PPSVPGESSRGGGVGGKHFPIIIYTTFESGALGKVESKIRDLGA 438
+V G++ G +DG YD V+PIEIEG GG VR L+IGYNNGDNPF AAQ FID+ ELPQ YLGE+ADY+TKR+GQ PPTLG S G GF+G+GDP+GFA A S KH P ++ TF++G +GKVE+KI + A
Sbjct: 395 EVTGSTNSGTLDGVQYDHVFPIEIEGQGG-VRTLKIGYNNGDNPFSAAQAFIDKYELPQGYLGEVADYITKRAGQAPPTLGVSTGGTPQAAQGGFTGVGDPTGFATAGRSSSYSSXXXXXXAAATKHVPAKLFMTFDTGDIGKVEAKILEFNA 546
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A1E7FK79_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK79_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.970e-28 Identity = 67/151 (44.37%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGAGFSGIGDPSGFANAAPPSVPGESSRGGGVGGKHFPIIIYTTFE-SG-----ALGKVESKIRDLG 435
+VMG+++GG +DG YD V PIE++ G V KLQIGYNNG+N FVAAQRFID + LPQ++L +IA+Y+ +R G PTLG GAG + P+ A P + G KH P+ Y FE SG L K++ KI + G
Sbjct: 439 QVMGSADGGTIDGAQYDHVLPIEVDQADGGVAKLQIGYNNGENQFVAAQRFIDAHMLPQNHLNDIANYIEQRVGNQTPTLGMGGAGGATAASASPTPVATTGMPMI----------GYKHIPVPAYKCFELSGKVAATTLEKMKKKIEEYG 579
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A7S2EVJ1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVJ1_TRICV) HSP 1 Score: 113 bits (282), Expect = 1.290e-26 Identity = 68/159 (42.77%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 1 KVMGASEG-GVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGAGFSGIGDPSGFAN---AAPPSVPGESSRGGGVGGKHFPIIIYTTFESGA----LGKVESKIRDLGAGVPDN 453
+V G ++ G +DG YD V+PIEI+ GG V+KLQIGYNNG+NPFV AQ+FID + L Q+YL EIADY+ KR G PT+G +G AA +VP E S +H P+ Y TFE+GA L ++ +K R+ A + N
Sbjct: 127 EVTGTNQNAGTIDGVQYDHVFPIEIDVAGGGVQKLQIGYNNGENPFVTAQKFIDDHMLDQNYLAEIADYIQKRVGDQGPTIGMAGGSXXXXXXXXXXXXXXPPAAASGAVPMEVSPPPAPEYQHLPMRGYKTFEAGADAKSLSRIVAKCREFNASLTTN 285
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: B8BZP4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZP4_THAPS) HSP 1 Score: 112 bits (281), Expect = 5.230e-26 Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 25 GVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGAGFSGIGDPSGFANAAPPSVPGESSRGGGVGGKHFPIIIYTTFESG----ALGKVESKIRDLGAGVPDNQ 456
G ++G+SYD V PIEI+ GG V+KLQIGYNNG+NPFV AQ+FID++ L Q+YL +IADY+ +R+G++ PTLG G A I +P P+ P + H P+ Y TF++G L KV KIR+ + V NQ
Sbjct: 461 GTLNGKSYDHVLPIEIDVPGGGVQKLQIGYNNGENPFVTAQQFIDEHMLDQNYLPQIADYIRQRAGESGPTLG--GGNAAAPTIYEPE-------PNGPTPMETEPTLAYAHLPMKGYKTFDAGIDKKGLTKVVQKIREFNSSVTSNQ 599
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A7S0Y5P3_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y5P3_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.150e-25 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGAGFSGIGD-PSGFANAAPPSVPGESSRGGGVGGKHFPIIIYTTFESGA------LGKVESKIRDLG 435
+VMG+++GG VDG YD V PIE++ GG V KLQIGYNNG+N FVAAQRFID + LPQ +LGEIA+Y+ +R G TLG GD PS + AA +P S + H P+ Y +FE A L K++ KI + G
Sbjct: 244 QVMGSADGGAVDGVQYDHVLPIEVDQTGGGVAKLQIGYNNGENQFVAAQRFIDAHVLPQHHLGEIANYIQQRVGSQGTTLG-----------GDAPSQSSPAASVGLPMASLQ-------HLPVKAYKSFELSAKNATTTLEKMKKKILEFG 377
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A8K1C6K2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6K2_PYTOL) HSP 1 Score: 111 bits (278), Expect = 1.310e-25 Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGA-VRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQ-TPPTLGCSGAGAGFSGIGDPSGFANAAPPSVPGESSRGGGVGGKHFPIIIYTTFESGALGKVESKIRDLGAGVPDNQKV 462
+V G GGVVDG++YD V P+E++ GGA VR L+IGYN GDNPF AAQ FID++ L Q+YL EIADY+T+RS PP + G + D +P ESS G K FP+ Y+TFE+ + K+ S +R VP+ K+
Sbjct: 394 EVTGTGSGGVVDGKAYDMVIPVELDQPGGAGVRHLEIGYNQGDNPFQAAQEFIDKHMLDQNYLREIADYITQRSSDYRPPVI------EGAEDMVD-----------IPAESSPTGPTY-KFFPVRSYSTFETIKIAKLMSTVRQFNDQVPETDKL 531
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A2D4BQB9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQB9_PYTIN) HSP 1 Score: 111 bits (278), Expect = 1.310e-25 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGA-VRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQ-TPPTLGCSGAGAGFSGIGDPSGFANAAPPSVPGESSRGGGVGGKHFPIIIYTTFESGALGKVESKIRDLGAGVPDNQKV 462
+V G GGVVDG++YD V P+EI+ GGA VR+L+IGYN GDNPF+ AQ FI+++ L Q+YL EIADY+T+RS + PP +G + A P+ P K+FP+ Y TFE+ + K+ + +R A V D+ ++
Sbjct: 384 EVTGTGSGGVVDGKAYDMVIPVEIDQPGGAGVRRLEIGYNQGDNPFMVAQEFINRHMLDQNYLREIADYITQRSSEYQPPVIGSDDVVSSAGNSXXXXXXXXMAAPAAPKF---------KYFPVATYNTFETTKIAKLMTTVRQFNAQVADDVRL 530
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A7S4AW22_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AW22_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.800e-25 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 1 KVMGASEGGVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGA-GFSGIGDPSGFANAAPPSVPGESSRGGGVGGKHFPIIIYTTFESGA------LGKVESKIRDLG 435
+VMG+++GG VDG YD PIEI+ GG V KL+IGYNNG+N FVAAQRFID + LPQ +L EIA+Y+ +R TLG + GA G +G G+PS A P V E H P+ Y +FE A L K++ KI + G
Sbjct: 436 QVMGSADGGTVDGVQYDHALPIEIDQTGGGVAKLEIGYNNGENQFVAAQRFIDAHMLPQHHLNEIANYIEQRVKSEGRTLGEAVPGAAGGNGSGNPSPAATTGVPMVSYE----------HLPVPAYKSFELSAKTATTTLEKMKKKIHEHG 577
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Match: A0A7S0BXD0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXD0_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.210e-25 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 1 KVMGASEG-GVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIDQNELPQSYLGEIADYLTKRSGQTPPTLGCSGAGAGFSGIGDPSGFANAAPPSVPGESSRGGGVGG--------KHFPIIIYTTFESGA----LGKVESKIRD 429
+V G++E G +DG S+D V+PIEI+ GG V L+IGYNNGDNPFV AQ+FID +EL Q+YL +IADY+ +R+G + PTLG D S +A PS+P S KH P+ Y F++GA + KV SK+ D
Sbjct: 113 EVTGSNENAGAIDGVSFDHVFPIEIDLRGGGVTTLKIGYNNGDNPFVTAQKFIDDHELDQNYLAQIADYIRQRTGASAPTLGM-----------DASSGNTSAAPSMPSSSXXXXSASTSSAAEPVYKHIPMKHYLVFDAGAEKTPMQKVMSKLVD 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133415.2374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig133415.2374.1 >prot_H-elongata_contig133415.2374.1 ID=prot_H-elongata_contig133415.2374.1|Name=mRNA_H-elongata_contig133415.2374.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp MGASEGGVVDGESYDRVYPIEIEGVGGAVRKLQIGYNNGDNPFVAAQRFIback to top mRNA from alignment at H-elongata_contig133415:758..1658+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig133415.2374.1 ID=mRNA_H-elongata_contig133415.2374.1|Name=mRNA_H-elongata_contig133415.2374.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=901bp|location=Sequence derived from alignment at H-elongata_contig133415:758..1658+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig133415:758..1658+ >mRNA_H-elongata_contig133415.2374.1 ID=mRNA_H-elongata_contig133415.2374.1|Name=mRNA_H-elongata_contig133415.2374.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig133415:758..1658+ (Himanthalia elongata Himel1 dioecious)back to top |