prot_H-elongata_contig13332.2368.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13332.2368.1
Unique Nameprot_H-elongata_contig13332.2368.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length196
Homology
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 4.460e-98
Identity = 142/196 (72.45%), Postives = 161/196 (82.14%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHEMPVET+LEK GAKDARI+TGGKEKER TLC+AV  D  KVPL  IFKGTP  PP++PGKGK TQPRK SIA E+   NR+K G+P  GMSFGVQ+KSWCD REC LWI  SW LRPNNGS++ Q P ILVLD+FKCH+D  FIA+L+++ NT VI IPGGLTPLLQ LDRMLNK+MK+LLRG YT Y
Sbjct:   58 MDQTPVQHEMPVETSLEKTGAKDARIATGGKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 5.190e-94
Identity = 145/196 (73.98%), Postives = 160/196 (81.63%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHEMPVETTLEK GAKDARISTGGKEKER TL +AVMADG KV   IIFKGTPF PP   GKGK T PRK S+A E+   NR K  HPA GMSFGVQ+KSW D REC  WIS SW+LRPNNGSI+ Q P ILVLD+FKCH+D+ +IA L++  NT VI+IPGGLTPLLQ LDRMLNK+MK+LLRGKYTAY
Sbjct:  120 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 315          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 1.700e-92
Identity = 144/196 (73.47%), Postives = 158/196 (80.61%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHE+PVETTLEK GAKDARISTGGKEKER TL +AVMADG KV   IIFKGTPF PP   GKGK T PRK S+A E+   NR K GHPA GMSFGVQ+KSW D REC  WIS SW+LRPNNGSI+ Q P ILVLD+FKCH+D+ FIA L++  NT VI IPG LTPLLQ LDRMLNK+MK+LLR KYTAY
Sbjct:  120 MDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAY 315          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 8.720e-91
Identity = 141/196 (71.94%), Postives = 156/196 (79.59%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHEMPVETTLEK GAKDAR+STGG+EKER TL +AV ADG KV L IIF GTPF PP   GKGK T PRK S+A E+   NR K GHPA GMSFGVQ+KSW D REC  W S SW+LRPNNGSI+ Q P ILVLD+FKCH+D+ FIA L++  NT VI IPGGLTPLLQ LDRMLNK+ K+LLR KYTAY
Sbjct:   54 MDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAY 249          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.170e-90
Identity = 139/196 (70.92%), Postives = 154/196 (78.57%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHEMPVETTLEK GAKDARISTGGKE+ER  L +AVMADG KV   I FKGTPF PP   GKGK T PRK S+A E+   NR K GHPA G+SFGVQ+KSW D REC  WIS  W+LRPNNGSI+ Q P ILVLD+FK H+D+ FIA L++  NT VI IPGGLTPLLQ LD MLNK+MK+LLRGKY AY
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAY 196          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 1.660e-89
Identity = 145/196 (73.98%), Postives = 159/196 (81.12%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHEMPVETTLE  GAKDARI+TGGKEKER TLC+AV ADG KVPL IIFKGTPF PP  PGKGK TQPRK SIA EV   NR+K G P  GMSFGVQ+KSWCD REC LWI +SW+LRPNNGSI+ Q   ILVLD+FKCH+D  FIA L++  NT VI IPGGL PL Q LDRMLNK+MK+LLRG YTA+
Sbjct:  274 MDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAH 469          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 6.200e-89
Identity = 142/191 (74.35%), Postives = 161/191 (84.29%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRG 191
            MDQTPVQ EMPVETTLEKRG KDARISTGGKEK+R T C+AVMADG KVP  IIFKG PF PP+  G+ K TQ RKG IAAEV L NRTK G+P  GM F VQ+KSWCDARECTLW+SESWR RPN+GS+I Q  SILVLD+F+CHR ++F+ DLR+R NT+VILIPGGLTPLLQ LDRMLNK+MK+L+RG
Sbjct:  189 MDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 4.150e-88
Identity = 145/222 (65.32%), Postives = 162/222 (72.97%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTG--------------------------GKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQ+EMPVETTLEK GAKDARI+TG                          GKEKER TLC+AV ADG+KVPL IIFKGTPF PP  PGKGK TQPRK SIA EV   NR+K G P  GMSFGVQ+KSWCD RE  LWI +SW+LRPNNGS++ Q   ILVLD+FKCH+D  FIA L++  NT VI IPGGLTPLLQ LDRMLNK+MK+LLRG YTA+
Sbjct:  207 MDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 428          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 2.140e-87
Identity = 143/204 (70.10%), Postives = 155/204 (75.98%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRL--------RPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQTPVQHEMPVETTLE  G KDARISTGGKEKER TL +AVMADG  V  CIIFKGTPF PP   GKGK T PRK S+A EV   NR K GHPA GMSFGVQ+KSW   +EC  WI  SW+L        RPNNGSI+ Q P ILVLD+FKCH+D+ FIA L +  NT VI IPGGLTPLLQ LDRMLNK+MK+LLRGKYTAY
Sbjct:  274 MDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 477          
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 1.950e-86
Identity = 141/197 (71.57%), Postives = 156/197 (79.19%), Query Frame = 0
Query:    1 MDQTPVQHEMPVETTLEKRGAKDARISTGG-KEKERITLCMAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSFGVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKAFIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY 196
            MDQ PVQHEMPVETTL+K GAKDARISTGG  EKER TL +AV ADG KV   IIF+GTPF PP   GKGK T+PRK  +A E+   NR K GHPA GMSFGVQ+KSW D REC  WIS SW+LRPNNGSI+ Q P ILVLD+FKCH D+ FIA L++  NT VI IPGGLTPLLQ LDRMLNK+MK+LLRGKYTAY
Sbjct:  314 MDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 510          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13332.2368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXD3_ECTSI4.460e-9872.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE5.190e-9473.98DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.700e-9273.47DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE8.720e-9171.94DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KT06_9PHAE1.170e-9070.92DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.660e-8973.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K583_9PHAE6.200e-8974.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KE45_9PHAE4.150e-8865.32DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE2.140e-8770.10DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.950e-8671.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 33..193
e-value: 1.0E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 95..194
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 2..64
NoneNo IPR availablePANTHERPTHR19303:SF23POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAINcoord: 2..64
NoneNo IPR availablePANTHERPTHR19303:SF23POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAINcoord: 95..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13332contigH-elongata_contig13332:2623..3395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13332.2368.1mRNA_H-elongata_contig13332.2368.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13332 2453..3395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13332.2368.1 ID=prot_H-elongata_contig13332.2368.1|Name=mRNA_H-elongata_contig13332.2368.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp
MDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERITLCMAVMADGSKVP
LCIIFKGTPFNPPNKPGKGKRTQPRKGSIAAEVALGNRTKLGHPAVGMSF
GVQKKSWCDARECTLWISESWRLRPNNGSIITQCPSILVLDNFKCHRDKA
FIADLRKRCNTSVILIPGGLTPLLQSLDRMLNKKMKQLLRGKYTAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom