mRNA_H-elongata_contig13329.2364.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: D7G826_ECTSI (A_deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G826_ECTSI) HSP 1 Score: 391 bits (1004), Expect = 7.570e-128 Identity = 204/302 (67.55%), Postives = 235/302 (77.81%), Query Frame = 3
Query: 234 VVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLADGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGG----GGN--------PGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGEHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFDEGLIPSLAESFNQECKMLL 1103
VVSDL AVRRI LE LQDMQ NVRYAELRTTPR LADGTSR++YIE VLQVF++FE + +T L + G GN L PRLLLS+DR ++V++AM VA+LAVELR E WR YV+G+D SGNPTKGSF++FR A E ARS GLKVTVHCGEVPND++FL ++ FRPERLGHA V+G EVR+ LLS P IPIEVCPTSNLLTL LS HGEHPT++GWIE GYPF +NTDDSGVF TDL TEFAH A S+ LD E +A LACRAVQDIFD+GL PSLAESF +EC +LL
Sbjct: 84 VVSDLPAVRRITLEALQDMQRDNVRYAELRTTPRPLADGTSRRDYIENVLQVFQEFEASQATKAIPSLLGNTGRIPESGNLTDESLVAGTLTPRLLLSVDRTKSVEEAMEVAKLAVELRGEEEWRPYVLGMDFSGNPTKGSFKEFRLAFESARSNGLKVTVHCGEVPNDTDFLEVIAFRPERLGHAVVLGEEVRQMLLSLVPRIPIEVCPTSNLLTLALSHHGEHPTVQGWIEAGYPFGVNTDDSGVFDTDLATEFAHLATSNDLDEEGIACLACRAVQDIFDDGLRPSLAESFRRECDVLL 385
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A835YU63_9STRA (A_deaminase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU63_9STRA) HSP 1 Score: 234 bits (597), Expect = 2.030e-67 Identity = 134/297 (45.12%), Postives = 177/297 (59.60%), Query Frame = 3
Query: 237 VSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLADGTSRQNYIEAVLQVFRDFETAASTNE--SRDGLSSGG---GGNP---GLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGEHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFDEGLIPSLAESFNQECKMLL 1103
V D+ VRRIA E L D V YAELRTTPR L DGT+ + Y +L+VF + + A S D + G G P GL+PRLLLS+DRG++VD A V LAV+L ++ + Y++G+DLSGNP KG FE F L+ AR+ GLKV+VHC EV N + AIL F P+RLGHA + ++ + +L R +P+EVCPTSN++TL L+ H EHPT W+ +P S+NTDD+GVF T L E+A AA+ LD + LA A FD +L + C LL
Sbjct: 73 VLDMDTVRRIAREALADFAADGVVYAELRTTPRPLRDGTTLEGYARQLLEVFAECDAEAQVLAALSADTCRNSGDLTGALPCEHGLIPRLLLSVDRGKSVDAAWEVVNLAVDLLKDAQYVKYLVGIDLSGNPAKGRFEDFAGPLQHARAAGLKVSVHCAEVYNPPDTQAILDFSPDRLGHALHLTSDALDRVLRNR--VPVEVCPTSNVITLGLNGHHEHPTAATWLAHEHPVSINTDDAGVFSTCLSREYASVAAAFDLDLSQCSALAVAAFSQAFDARTSAALLPLVRRRCDALL 367
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: R1CZ73_EMIHU (A_deaminase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ73_EMIHU) HSP 1 Score: 206 bits (523), Expect = 3.820e-57 Identity = 129/301 (42.86%), Postives = 168/301 (55.81%), Query Frame = 3
Query: 231 RVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLADGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLV-----PRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRT--YVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGEHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFD---EGLIPSLAESFNQECKMLL 1103
+ V+ L AV RIA E L D NV+Y ELRTTPRVL D + Y+ A+L V F+T G+P L RLLLS+DR +D AM ELA LR Y++G+D SGNPT+G+F + A E AR GLKV H EV + ++ +ILRFRPERLGHA ++ +L ++ PIPIE+CPTSNL TLKL +HPTM W+ +GYP S++TDDS VFGT E A A + L + +LA +Q FD +G+ P L +F +E LL
Sbjct: 61 KTVTSLAAVERIAWEVLSDFAADNVKYLELRTTPRVL-DDADLEGYVRALLGVCARFDTHQQ-------------GHPELAVWPMTTRLLLSIDRTGGLDKAMETVELAARLRAEPPSGADKYIVGLDFSGNPTRGTFADYVPAFEAAREAGLKVAAHAAEVDHPADNASILRFRPERLGHALLLSASDVASLRAS--PIPIELCPTSNLKTLKLRSMRDHPTMGVWLAEGYPVSISTDDSSVFGTSSSKELALVAEALGLAAHQVVQLALAPLQHTFDASTQGVEP-LRRAFERESAKLL 344
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A0M0J7E7_9EUKA (Adenosine deaminase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7E7_9EUKA) HSP 1 Score: 199 bits (506), Expect = 1.350e-54 Identity = 124/295 (42.03%), Postives = 160/295 (54.24%), Query Frame = 3
Query: 231 RVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLADGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGEHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFDEGL--IPSLAESFNQECKMLLKR 1109
+ V+ L AVRRI E L D V+Y ELRTTPR LAD + Y+ A+L FE + G+S + RLLLS+DR AM +LA LR ++GVD SGNPT+ SFE FR A E AR GL+V VH GEV + A++ FRPERLGHA ++ T + L PIPIE+CPTSNL TL+L++ HPT+ W+ +GYP S++TDDS VF T E A AA + L E +A+LA + FD + + L F C L R
Sbjct: 74 KTVTTLAAVRRITREVLSDFAADGVKYLELRTTPRTLADADV-EGYVRALLAEVASFEA----EQVAQGISWP------MTVRLLLSVDRSGDTAKAMVTVQLATRLRAE---LGCIVGVDFSGNPTRSSFEHFREAFEAARLAGLRVAVHVGEVNAPEDTAAVIDFRPERLGHALLLSTHDLKRLRER--PIPIELCPTSNLKTLQLNELESHPTLTTWLAEGYPVSISTDDSTVFDTTSSRELALAAMACHLSVEEIAQLAQAPLAHAFDPDMAAMDRLRRRFEDACAAALAR 352
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A8J5X8Q8_DIALT (A_deaminase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8Q8_DIALT) HSP 1 Score: 192 bits (488), Expect = 1.140e-51 Identity = 120/279 (43.01%), Postives = 152/279 (54.48%), Query Frame = 3
Query: 231 RVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLADGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEI-WRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGEHPTMRGWI------EQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFD 1046
R +S A++R+A E L D VRY E+RTTPR L D +R Y+ AVL FE A G+ +V RLLLS+DR + A ELA LR R ++GVDLSGNP+KG F F AL AR+ GL +VHC EV + +E +L FRP RLGHA + EAL +A PIPIE+CPTSNL TL+ + EHPT W+ + YP S++TDD+GVFGT E A A LD +A LA R + D F+
Sbjct: 96 RALSTEAALKRVAAEVLADFAADGVRYLEIRTTPRALRDVDAR-GYVCAVLDSIGKFERDA--------------GDRAMVVRLLLSIDRSGPIARADETVELAHTLRAERADARRLIVGVDLSGNPSKGRFVDFAPALARARAAGLPASVHCAEVEDHAEMDDVLAFRPARLGHALFLSAAHVEALRAA--PIPIELCPTSNLTTLRRAHMREHPTAARWLLDDLRTTEAYPVSISTDDTGVFGTSASAELARVALELRLDPAHVAHLAARGLHDAFE 357
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A6T6SUY3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6SUY3_9EUKA) HSP 1 Score: 189 bits (481), Expect = 1.530e-50 Identity = 112/268 (41.79%), Postives = 157/268 (58.58%), Query Frame = 3
Query: 234 VVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLAD-GTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLVPRLLLSMDRGRT-VDDAMAVAELAVELRRNEIWRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGEHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAV 1031
+V+ L V RI +E L+D NVRY ELRTTPR + G + ++Y++AV+ + F+ A S N + PRLLLS++RG ++ A+ +LA+E R E YV+GVD SGNP F+ F A E AR GLK +HCGEV N + I++F+PERLGHA + + L + + +PIE+CPTSN+ TLKL+D +HPT+ W+E YP+ + TDDSGVF T L E AA + SL +++L AV
Sbjct: 127 LVASLDIVTRITVEVLEDFSRENVRYIELRTTPRDSPELGITPRSYVQAVI---KGFKLAKSKNLP-------------IEPRLLLSVNRGSNDLNAALRTIDLAIEYSRKE--ERYVVGVDFSGNPYGRGFKYFLPAFEKARKAGLKCAIHCGEVENHDDTTDIIKFQPERLGHAVRLNCIHSKMLQNLK--LPIEICPTSNMRTLKLTDINQHPTLSKWVESNYPYCICTDDSGVFRTSLSEEIYLAAKAGSLSPHQVSKLCIDAV 374
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: B7G5P7_PHATC (Adenosine deaminase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5P7_PHATC) HSP 1 Score: 187 bits (475), Expect = 1.200e-49 Identity = 110/320 (34.38%), Postives = 180/320 (56.25%), Query Frame = 3
Query: 213 FHQLPSRVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVL--------ADGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRTY-----VIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSD-------HG--EHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFDEGLIPSLAESFNQECKMLLK 1106
F ++P+ V+DL+A+RRI E L+D H+V Y ELR+TP+ L + +Q YIE VL+ RDF++ S D + S +V ++++DR +++++A +A+++ + + R ++G+DL GNPTK F F+ + AR GLKVT+HCGE+P+ E +AIL FRP+RLGHA ++ + +++ L + IP+E CPTSN++TL+L+ HG +HP + W++ +P S+ TDD GVF T+ E + SLD +MA +V F +L + N + + ++K
Sbjct: 90 FAEIPA-CVNDLSALRRITQEALEDFAAHHVAYLELRSTPKRLLRSHQDDQSQKVDKQVYIETVLEGIRDFQSKEKERFSHDPVLSSS--RLPIVCNFIVAIDRSQSLEEATDTVHIAIDMFQRQQSRPSNLSPSIVGIDLGGNPTKNDFRTFQTLFQKARQAGLKVTIHCGEIPSRDEAVAILAFRPDRLGHALLLPSSLQKVLEDTK--IPVETCPTSNVMTLELARSSNGNLVHGLSQHPCLAQWLQNNHPLSIGTDDPGVFHTNATKELVLLVNTFSLDPCAMAEKVADSVNYAFCNE---TLRQEINAKMREIMK 401
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A1Z5JMU6_FISSO (Adenosine deaminase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMU6_FISSO) HSP 1 Score: 184 bits (468), Expect = 1.470e-48 Identity = 117/339 (34.51%), Postives = 178/339 (52.51%), Query Frame = 3
Query: 213 FHQLPSRVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLADGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPND-----------------SEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDH---------GEHPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIF-DEGLIPSLAESFNQECKMLLKRC*ILQGSFSKGHC 1148
F ++P R V+D+ ++RRI LE L D HNV Y ELRTTP+VL ++ Y+E VL V +FE + + + + RL++++DR + ++A +LA+ R++ + ++G+DL GNPT+G F FR LE AR GL++T+HCGEV + SE A+L F P+RLGHA + S IP+E CPTSN++TL+L+ H +HP +R W++ YP ++ TDD GVF T+ E + L+ + RL ++++ F DE L E ++E MLL +LQ + KG C
Sbjct: 101 FAEIP-RCVNDVDSLRRITLEALHDFAAHNVVYLELRTTPKVLNAECDKRTYLETVLGVMNEFEQSYTRS---------------MTCRLIVAIDRSLSEEEACENVDLAIAFRKSTLSADRIVGMDLGGNPTRGDFHCFRPHLERARQAGLRITLHCGEVADCDMTSNITHADETSCSTYSEVQAMLDFHPDRLGHALFVPNTFWS---SQERRIPVETCPTSNVMTLELAQHVRGHLMEGLQQHPQLREWLDTQYPLAIGTDDPGVFDTNPTKELWLLCRAFDLNVSIICRLVEQSMEYAFCDEATKRRLQEDIHEE--MLL----LLQSNQGKGSC 414
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A7S4WC74_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WC74_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.480e-47 Identity = 109/329 (33.13%), Postives = 168/329 (51.06%), Query Frame = 3
Query: 213 FHQLPSRVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVL-----------------ADGTSR-----QNYIEAVLQVFRDFETAASTNESRDGLSSGGGGN----PGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWRTYVIGVDLSGNPTKGSFEKFRHALEIARSGGLKVTVHCGEVPNDS--------------EFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGE---------HPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFDEG 1052
F ++P + V DL A+RRI E ++D NV Y ELR+TP+ L G R + Y+E +L +DFE +++ G + P L+PR +LS+DR TV++A+ LA+E+ R Y++GV++ GNPTK F F A +AR G++V +HCGEVP S E + ++ FRP+RLGH ++ + L + PIPIE CPTSN++TL+L+ H E HP + W++ YP S+NTDDSGVF T L E ++ +D ++ ++ ++ F++
Sbjct: 141 FAEIP-KCVDDLDALRRITREAMEDFASENVAYLELRSTPKRLFSYDVSTTKIDELENVHCSGQKRILETKRKYVETILDEMKDFEDKERERYAQEKKKYVVGSSIVRLP-LLPRYILSVDRSGTVEEALDTIHLAIEMFRTN--NEYIVGVEMGGNPTKNDFHNFEPAFRLAREAGMRVAIHCGEVPCGSSTNEQDASLKKAFDEAMRVIEFRPDRLGHGLLLPESITSILQN--DPIPIECCPTSNVMTLELAQHHEGSLIEGLRGHPQLSKWLKNQYPISINTDDSGVFNTTLTRELLLLVEAYGVDEFTIRKIILNSIDHCFEQS 463
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Match: A0A7S1B3Z7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3Z7_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.030e-47 Identity = 116/311 (37.30%), Postives = 160/311 (51.45%), Query Frame = 3
Query: 231 RVVSDLTAVRRIALETLQDMQGHNVRYAELRTTPRVLA---------DGTSRQNYIEAVLQVFRDFETAASTNESRDGLSSGGGGNPGLVPRLLLSMDRGRTVDDAMAVAELAVELRRNEIWR-----TYVIGVDLSGNPTKGSFEK-FRHALEIARSGGLKVTVHCGEVP--------------NDSEFLAILRFRPERLGHAAVMGTEVREALLSARPPIPIEVCPTSNLLTLKLSDHGE--------HPTMRGWIEQGYPFSLNTDDSGVFGTDLPTEFAHAAASHSLDRESMARLACRAVQDIFDEG 1052
R V DL RRIA E L+D+ V YAE+R+TPR ++ + YI V V R+FE + RD GG LVPR ++S+DR + A+ +A+ AV +NE YV+G+DL GNP GSFE F A IAR G+KV++HCGE+P E AIL FRP+RLGH+ + T+ E L S PIP+E CPTSN+LT+ L+ G HP + GW+ YP ++TDD VFGTD E A + + +A++ ++Q +F+E
Sbjct: 98 RTVDDL---RRIAREALEDLAAAGVCYAEIRSTPRPMSVAGCASEGGGSCTLSEYIRVVTGVMREFEREEAERYRRDP-----GGRLPLVPRYIVSVDRSKGAGVAVEIAKAAVNFFKNERRNGSGDGDYVVGMDLGGNPHIGSFENDFEPAFRIAREAGMKVSIHCGEIPCGKSADEIDPSLKFAHDEAEAILSFRPDRLGHSLFLPTQATERLAS--DPIPVECCPTSNVLTIGLAGEGNDMVEGLRCHPGLPGWLAGNYPIVVSTDDPAVFGTDPARELALLHLAFGVPEAELAKICLESIQYVFEES 398 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13329.2364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13329.2364.1 >prot_H-elongata_contig13329.2364.1 ID=prot_H-elongata_contig13329.2364.1|Name=mRNA_H-elongata_contig13329.2364.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=326bp MAPTAHHNTLESSCATWCGTQTPGHFHQLPSRVVSDLTAVRRIALETLQDback to top mRNA from alignment at H-elongata_contig13329:944..3694+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13329.2364.1 ID=mRNA_H-elongata_contig13329.2364.1|Name=mRNA_H-elongata_contig13329.2364.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2751bp|location=Sequence derived from alignment at H-elongata_contig13329:944..3694+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13329:944..3694+ >mRNA_H-elongata_contig13329.2364.1 ID=mRNA_H-elongata_contig13329.2364.1|Name=mRNA_H-elongata_contig13329.2364.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1956bp|location=Sequence derived from alignment at H-elongata_contig13329:944..3694+ (Himanthalia elongata Himel1 dioecious)back to top |