mRNA_H-elongata_contig133007.2349.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: D7FXG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG2_ECTSI) HSP 1 Score: 126 bits (317), Expect = 3.000e-32 Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPPGGADGGK 216
QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMI+SPFQTA ENLTLLFEKNKQKGF P +GGK
Sbjct: 148 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIDSPFQTAHENLTLLFEKNKQKGFGMPA-LEGGK 218
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE) HSP 1 Score: 120 bits (300), Expect = 5.970e-30 Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPPGGADGGK 216
QALAVLPTSGNPHNQLA+LATYTDAECVSVYRYCRSLMIESPFQTA ENLTLLFEKNK KGF P +GGK
Sbjct: 291 QALAVLPTSGNPHNQLALLATYTDAECVSVYRYCRSLMIESPFQTAHENLTLLFEKNK-KGFGMPA-LEGGK 360
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A835Z7T1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T1_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.370e-24 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQK 180
+ALA +P GNPHNQ+AVLATYTDAECV+VYRYCRSL+I PF TA+ENL LLFEKNKQK
Sbjct: 193 RALAAMPHGGNPHNQMAVLATYTDAECVAVYRYCRSLLIRHPFMTARENLALLFEKNKQK 252
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A6A4Z8E5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8E5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.840e-23 Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPPGGADGGK 216
+ALA+LP +GNPHNQLAVLATY +AE ++VYRYCRSL++ +PF TA+ENL LLFE+N+ + P ADGGK
Sbjct: 171 RALAILPDNGNPHNQLAVLATYVEAEAIAVYRYCRSLLLPTPFATAEENLVLLFERNRHRALPPA--ADGGK 240
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A3R7BM42_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BM42_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.030e-22 Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPPGGADGGK 216
+ALA+LP +GNPHNQLAVLATY +AE ++VYRYCRSL++ +PF TA+ENL LLFE+N+ + P ADGGK
Sbjct: 174 RALAILPDNGNPHNQLAVLATYVEAEAIAVYRYCRSLLLPTPFATAEENLVLLFERNRHRALPPA--ADGGK 243
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: W4FHK0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHK0_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.580e-22 Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPPGGADGGK 216
+ALA+LP +GNPHNQLAVLATY +AE ++VYRYCRSL++ +PF TA+ENL LLFE+N+ + P ADGGK
Sbjct: 171 RALAILPDNGNPHNQLAVLATYVEAEAIAVYRYCRSLLLPTPFATAEENLVLLFERNRHRALPPV--ADGGK 240
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: W7U237_9STRA (Telomerase activating protein est1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U237_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.590e-22 Identity = 44/60 (73.33%), Postives = 54/60 (90.00%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQK 180
+A+ +PTSGNPHNQLAVLATYT+AECV+VYRYCR+++ SPF TA+ENL LLFEKN+QK
Sbjct: 173 RAIDTMPTSGNPHNQLAVLATYTEAECVAVYRYCRAVLCASPFPTAKENLALLFEKNRQK 232
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A3R7NMQ1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NMQ1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.440e-22 Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPP 195
+ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+ PF TA+ENL LLFE+++Q+ +PP
Sbjct: 192 RALAVLPENGNPHNQLAVLATYIEAETVAVYRYCRSLLTAQPFVTAEENLALLFERSRQRPLVPP 256
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A024GJG1_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GJG1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 7.580e-22 Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 4 ALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPP 195
AL V+P +GNPHNQLAVLATY DAE V+VYRYCRSL+I +PF TA+ENL LLFE+++Q+ PP
Sbjct: 219 ALRVIPENGNPHNQLAVLATYVDAETVAVYRYCRSLLIANPFSTAEENLVLLFERSRQQPLAPP 282
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Match: A0A2D4C910_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C910_PYTIN) HSP 1 Score: 97.1 bits (240), Expect = 7.580e-22 Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 1 QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLTLLFEKNKQKGFMPP 195
+AL+VLP +GNPHNQLAVLATY +AE V+VYRYCRSL+I PF TA+ENL LLFE+++Q+ PP
Sbjct: 193 RALSVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFATAEENLALLFERSRQRPLAPP 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133007.2349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig133007.2349.1 >prot_H-elongata_contig133007.2349.1 ID=prot_H-elongata_contig133007.2349.1|Name=mRNA_H-elongata_contig133007.2349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp QALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIESPFQTAQENLback to top mRNA from alignment at H-elongata_contig133007:670..885- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig133007.2349.1 ID=mRNA_H-elongata_contig133007.2349.1|Name=mRNA_H-elongata_contig133007.2349.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=216bp|location=Sequence derived from alignment at H-elongata_contig133007:670..885- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig133007:670..885- >mRNA_H-elongata_contig133007.2349.1 ID=mRNA_H-elongata_contig133007.2349.1|Name=mRNA_H-elongata_contig133007.2349.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at H-elongata_contig133007:670..885- (Himanthalia elongata Himel1 dioecious)back to top |