prot_H-elongata_contig132961.2348.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132961.2348.1
Unique Nameprot_H-elongata_contig132961.2348.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A7S1TZV2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZV2_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.620e-31
Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L DG+  +G SFGA  S AGEVVFNTGMVGYPEALTDPSYRGQILVLTYP+VGNYGVPN+ DMDE  LPAHFE
Sbjct:   75 LVLSDGTEVSGWSFGAEASKAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPLVGNYGVPNDEDMDEYDLPAHFE 149          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: W7U0U1_9STRA (Cad protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0U1_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.430e-30
Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L DGSVH G  FGA+V  AGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVP+E  +D  GLP +FE
Sbjct:   89 LVLVDGSVHQGFGFGADVPVAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPSEDALDAHGLPLYFE 163          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A662ISX0_9CREN (Carbamoyl-phosphate synthase small subunit (Fragment) n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662ISX0_9CREN)

HSP 1 Score: 113 bits (283), Expect = 5.290e-30
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L+DGSV  G  FG+     GEVVFNTGMVGYPEALTDPSYRGQIL  TYP++GNYGVP+ +D+DE GLP HFE
Sbjct:   16 LVLEDGSVFKGWGFGSPSLVVGEVVFNTGMVGYPEALTDPSYRGQILCFTYPLIGNYGVPSYSDVDEYGLPLHFE 90          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A5A8E0Z2_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0Z2_CAFRO)

HSP 1 Score: 119 bits (299), Expect = 9.260e-30
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            +TL DG+V  G SFGA V+AAGEVVFNT MVGYPEALTDPSYRGQILVLT+P++GNYGVP+ +++DE GLP HFE
Sbjct:   42 ITLADGTVIEGESFGAPVAAAGEVVFNTSMVGYPEALTDPSYRGQILVLTFPLIGNYGVPDMSEVDEWGLPKHFE 116          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A7S3XV13_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV13_HETAK)

HSP 1 Score: 112 bits (280), Expect = 1.040e-29
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L DG++  G SFGA  S +GEVVFNTGMVGYPE+LTDPSYRGQILVLTYP++GNYGVP+  D DE GLP   E
Sbjct:   40 LELTDGTITKGFSFGATTSMSGEVVFNTGMVGYPESLTDPSYRGQILVLTYPLIGNYGVPSPDDKDEHGLPKFME 114          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A5D6YCR3_9STRA (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6YCR3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.380e-29
Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L DG+ +TG SFGA  S AGEVVFNTGMVGYPEAL+DPSYRGQILVLTYP++GNYGVP+ A  D+ GLP +FE
Sbjct:   28 LVLADGTTYTGYSFGAQTSMAGEVVFNTGMVGYPEALSDPSYRGQILVLTYPLIGNYGVPDMAVRDDFGLPKYFE 102          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A7S1BAC4_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAC4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.380e-29
Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L+L D SVH G +FGA+ S  GEVVFNTGMVGYPEALTDPSYRGQILVLT+P++GNYGVP   +MDE GLP +FE
Sbjct:  180 LSLDDSSVHEGYAFGASTSVHGEVVFNTGMVGYPEALTDPSYRGQILVLTFPLIGNYGVPGGDEMDEHGLPKYFE 254          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A5N5PCB7_PANHP (CPSase_sm_chain domain-containing protein n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5PCB7_PANHP)

HSP 1 Score: 108 bits (270), Expect = 4.980e-29
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGL 70
            L L+DG+V  G SFG   SA+GE+VFNTG+VGYPEALTDPSYRGQIL LTYP+VGNYGVPN  ++DE+GL
Sbjct:   35 LVLEDGTVMKGYSFGHGQSASGELVFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNMQELDEVGL 104          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: A0A8J1ZRX4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZRX4_9DINO)

HSP 1 Score: 116 bits (291), Expect = 1.110e-28
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L++G  + G SFGA+ S +GEVVFNTGMVGYPEALTDPSY GQILVLTYP++GNYGVPNE  +D +GLP HFE
Sbjct:   56 LVLQNGLEYGGYSFGADCSVSGEVVFNTGMVGYPEALTDPSYTGQILVLTYPLIGNYGVPNEKHVDALGLPKHFE 130          
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Match: UPI000711FBD4 (carbamoyl phosphate synthase small subunit n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711FBD4)

HSP 1 Score: 108 bits (270), Expect = 1.350e-28
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPNEADMDEMGLPAHFE 75
            L L DG+V  G SFG   S +GEVVFNTGMVGYPE+LTDPSYRGQILV T+PMVGNYG+P + ++DE GLP  FE
Sbjct:   27 LVLADGTVFEGYSFGEETSRSGEVVFNTGMVGYPESLTDPSYRGQILVFTFPMVGNYGIPGD-ELDEYGLPKWFE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132961.2348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1TZV2_9STRA1.620e-3180.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7U0U1_9STRA1.430e-3078.67Cad protein n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A662ISX0_9CREN5.290e-3070.67Carbamoyl-phosphate synthase small subunit (Fragme... [more]
A0A5A8E0Z2_CAFRO9.260e-3074.67Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A7S3XV13_HETAK1.040e-2970.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5D6YCR3_9STRA4.380e-2973.33Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A7S1BAC4_9STRA4.380e-2973.33Hypothetical protein n=4 Tax=Corethron hystrix Tax... [more]
A0A5N5PCB7_PANHP4.980e-2972.86CPSase_sm_chain domain-containing protein n=1 Tax=... [more]
A0A8J1ZRX4_9DINO1.110e-2872.00Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
UPI000711FBD41.350e-2869.33carbamoyl phosphate synthase small subunit n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002474Carbamoyl-phosphate synthase small subunit, N-terminal domainSMARTSM01097CPSase_sm_chain_2coord: 1..75
e-value: 4.0E-12
score: 51.2
IPR002474Carbamoyl-phosphate synthase small subunit, N-terminal domainPFAMPF00988CPSase_sm_chaincoord: 1..67
e-value: 4.5E-29
score: 100.9
IPR036480Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyGENE3D3.50.30.20coord: 1..74
e-value: 6.1E-32
score: 112.0
IPR036480Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamilySUPERFAMILY52021Carbamoyl phosphate synthetase, small subunit N-terminal domaincoord: 1..63
NoneNo IPR availablePANTHERPTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERcoord: 1..75
NoneNo IPR availablePANTHERPTHR11405:SF50coord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132961contigH-elongata_contig132961:921..1145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132961.2348.1mRNA_H-elongata_contig132961.2348.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132961 921..1145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132961.2348.1 ID=prot_H-elongata_contig132961.2348.1|Name=mRNA_H-elongata_contig132961.2348.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
LTLKDGSVHTGVSFGANVSAAGEVVFNTGMVGYPEALTDPSYRGQILVLT
YPMVGNYGVPNEADMDEMGLPAHFE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002474CarbamoylP_synth_ssu_N
IPR036480CarbP_synth_ssu_N_sf