prot_H-elongata_contig132851.2345.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132851.2345.1
Unique Nameprot_H-elongata_contig132851.2345.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
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BLAST of mRNA_H-elongata_contig132851.2345.1 vs. uniprot
Match: D7FJI7_ECTSI (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI7_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 7.380e-8
Identity = 25/29 (86.21%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:    9 FFQRARSDPRCQDHDAQSLLIMPIQRIPR 37
               RARSDPRCQD DAQSLLIMPIQRIPR
Sbjct:  375 LLHRARSDPRCQDLDAQSLLIMPIQRIPR 403
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132851.2345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI7_ECTSI7.380e-886.21Pleckstrin homology (PH) domain-containing protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035899Dbl homology (DH) domain superfamilyGENE3D1.20.900.10coord: 6..37
e-value: 1.4E-6
score: 30.0
IPR035899Dbl homology (DH) domain superfamilySUPERFAMILY48065DBL homology domain (DH-domain)coord: 8..37
IPR000219Dbl homology (DH) domainPFAMPF00621RhoGEFcoord: 9..37
e-value: 3.9E-6
score: 27.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132851contigH-elongata_contig132851:245..358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132851.2345.1mRNA_H-elongata_contig132851.2345.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132851 245..358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132851.2345.1 ID=prot_H-elongata_contig132851.2345.1|Name=mRNA_H-elongata_contig132851.2345.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
MPPSIPRPFFQRARSDPRCQDHDAQSLLIMPIQRIPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035899DBL_dom_sf
IPR000219DH-domain