prot_H-elongata_contig132590.2330.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132590.2330.1
Unique Nameprot_H-elongata_contig132590.2330.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: D7FKR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR3_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 3.390e-32
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 NILVCEAGDIGHVLRTMGSRRRHPQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            NIL+C+ GDIGHVLRT+G+RR HPQHTI+ Y+WE QIEVLAR LLLL V +DW+LP+RQRANVFLEIFGN  VQ
Sbjct:   33 NILICQPGDIGHVLRTIGTRRGHPQHTIHLYIWERQIEVLARHLLLLQVAQDWELPIRQRANVFLEIFGNCLVQ 106          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A5D6Y646_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y646_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.760e-18
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    2 ILVCEAGDIGHVLRTMGSRRRHPQHT--INFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            +L+   GDI H+L T+  RRRH  HT  ++ Y++E   EVLAR LLLL + +DW+LP+RQR N+FLE+FGNA VQ
Sbjct:   47 VLLVGPGDIRHILATLAHRRRHAAHTRALHIYVFERASEVLARHLLLLQLAQDWELPLRQRCNLFLEVFGNARVQ 121          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A7S3MGV5_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGV5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.490e-17
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    1 NILVCEAGDIGHVLRTMGSRRRHPQH------TINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            NIL+ + GDI H+L T+  RRRH +        INFYL+E  +E +AR LLLL ++ D+++P+RQRAN++LE+FGN  VQ
Sbjct:   44 NILLIQPGDIRHILYTVSQRRRHVKKFGGSLPKINFYLFETPVETIARDLLLLQILTDYEVPIRQRANIYLEVFGNNKVQ 123          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A024GAP1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GAP1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.950e-17
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    1 NILVCEAGDIGHVLRTMGSRRRH-PQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            NIL+    DI HVL T+ ++R   P   +N YL+E  IEVLARQLLLL V  D +LP RQR N FLEIFGNAF+Q
Sbjct:   47 NILLVGPSDIRHVLHTIANKRHTAPNRPVNIYLYEKSIEVLARQLLLLQVFFDSELPFRQRCNAFLEIFGNAFIQ 121          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A397AQF6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQF6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.160e-17
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 ILVCEAGDIGHVLRTMGSRRRHPQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            +LV   GDI HVL T+   RR  +  ++ YL+E   E LAR LLLL ++ DW++P+RQR N FLE+FGNA VQ
Sbjct:   36 VLVLSPGDIRHVLTTIARSRRWKKRPLHIYLYEKSPECLARALLLLQIVNDWEVPLRQRCNTFLEVFGNALVQ 108          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A7S2BEA7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEA7_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.630e-17
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 NILVCEAGDIGHVLRTMGSRRRHPQ-HTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            +ILV + GDI H+L ++  RRR P    ++FYL E  +EVLAR LLLL +  DW+LP+RQRAN+FLE FGN+ +Q
Sbjct:   40 SILVAQPGDIRHLLCSISRRRRRPGVGALHFYLIEQPVEVLARHLLLLQIATDWELPIRQRANLFLEAFGNSLLQ 114          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A2D4CK38_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CK38_PYTIN)

HSP 1 Score: 83.6 bits (205), Expect = 2.660e-17
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    1 NILVCEAGDIGHVLRTMGSRRRH-----PQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            N+L+   GDI HVL T+  RRRH     P   ++ Y++E  +E LAR LLL  + +DW LP+RQR N FLE+FGNA VQ
Sbjct:   43 NLLLIGPGDIRHVLHTVARRRRHASKDAPLRPLHIYVYERSVETLARHLLLWAIAQDWDLPLRQRCNTFLEVFGNALVQ 121          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A6A5AKG1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKG1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.950e-17
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 ILVCEAGDIGHVLRTMGSRRRHPQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            +LV   GDI HVL T+   RR  +  ++ YL+E   E LAR LLLL ++ DW++P+RQR N FLE+FGNA VQ
Sbjct:   53 VLVLSPGDIRHVLATIARSRRWKKRPLHIYLYEKSPECLARALLLLQIVNDWEVPLRQRCNTFLEVFGNALVQ 125          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A425DN38_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DN38_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.590e-17
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 ILVCEAGDIGHVLRTMGSRRRHPQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            +LV   GDI HVL T+   RR  +  ++ YL+E   E LAR LLLL ++ DW++P+RQR N FLE+FGNA VQ
Sbjct:   36 VLVLSPGDIRHVLATIARSRRWKKRPLHIYLYEKSPECLARALLLLQIVNDWEVPLRQRCNTFLEVFGNALVQ 108          
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Match: A0A418EP78_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EP78_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.110e-16
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 ILVCEAGDIGHVLRTMGSRRRHPQHTINFYLWEGQIEVLARQLLLLHVMKDWQLPVRQRANVFLEIFGNAFVQ 74
            +LV   GDI HVL T+   RR  +  ++ YL+E   E LAR LLLL ++ DW++P+RQR N FLE+FGNA VQ
Sbjct:   36 VLVLSPGDIRHVLATIARSRRWKKRPLHIYLYEKSPECLARALLLLQIVNDWEVPLRQRCNTFLEVFGNALVQ 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132590.2330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR3_ECTSI3.390e-3275.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6Y646_9STRA5.760e-1854.67Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S3MGV5_9STRA1.490e-1750.00Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A024GAP1_9STRA1.950e-1758.67Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A397AQF6_9STRA2.160e-1752.05Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S2BEA7_9STRA2.630e-1754.67Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2D4CK38_PYTIN2.660e-1750.63Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A6A5AKG1_9STRA3.950e-1752.05Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A425DN38_9STRA8.590e-1752.05Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A418EP78_9STRA1.110e-1652.05Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027974Domain of unknown function DUF4470PFAMPF14737DUF4470coord: 1..73
e-value: 2.4E-16
score: 59.7
IPR039304Dynein assembly factor 3, axonemalPANTHERPTHR22118FAMILY NOT NAMEDcoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132590contigH-elongata_contig132590:985..1458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132590.2330.1mRNA_H-elongata_contig132590.2330.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132590 985..1458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132590.2330.1 ID=prot_H-elongata_contig132590.2330.1|Name=mRNA_H-elongata_contig132590.2330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
NILVCEAGDIGHVLRTMGSRRRHPQHTINFYLWEGQIEVLARQLLLLHVM
KDWQLPVRQRANVFLEIFGNAFVQVLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027974DUF4470
IPR039304DNAAF3